Gene Details:
- MSU gene ID: LOC_Os05g43440
- RAPdb gene ID: Os05g0509700
- Gene Symbol: TA1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Cytological analyses revealed that the increased aleurone cell layers in TA1 originate from a developmental switch of subaleurone toward aleurone instead of starchy endosperm in the wild type.
Function-related keywords:
Literature:
- Defective mitochondrial function by mutation in THICK ALEURONE 1 encoding a mitochondrion-targeted single-stranded DNA-binding protein leads to increased aleurone cell layers and improved nutrition in rice . DOI: 10.1016/j.molp.2021.05.016 ; PMID: 34015460
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g43440.1 cDNA ATAACTCAACCTTTTGATCTCGCTACGAAGCTCCTCCGCTCCACCCAGGCACGAGCGCCGCCGCGGCCGACTCCACCGGACACCACCCAACGCCGCCAGCCGCCTCCTCCCATCCTCCCTCGATCCGTACGGATAGCCTCCCCGCTCGCTCGGTCTGCGCCCGTCGTCGTCGTCCCGCCGTCTTATCCCTCCCGCGACTCGGCGACGCGCGAAGGCCTCCGGCGCGGGGCTGAAGATTTACCATGAATTCTCTCAGCAATGGATTACTGAAGGGCTTGAGGAGGGTCTTAGAACAGCAGAGAAAACCAATTGATTTCTACAGAAAATCTCAAGCTTGGAGTTCTACTGTTTCCTTTTCTGATATTGATGAGAAGAGTGAAATGGGAGGTGATGATGATTATACAGATTCAAGACGAGAGTTAGAACCCCAAAGCGTAGACCCCAAGAAGGGCTGGGGATTCCGTGGTGTTCACAGGGCTATAATATGCGGAAAAGTCGGACAGGTTCCTGTGCAGAAAATTTTAAGGAATGGTCGTACAGTGACTGTTTTTACAGTTGGAACTGGTGGCATGTTTGACCAGAGGGTAGTAGGGGATGCAGATCTGCCAAAGCCAGCTCAGTGGCATCGGATAGCCATTCATAATGACCAGCTAGGTGCTTTTGCTGTCCAGAAGCTGGTGAAGAATTCTGCAGTTTATGTTGAGGGTGATATTGAAACCAGAGTATACAATGACAGCATTAATGATCAAGTGAAAAATATACCAGAGATTTGTCTTCGACGCGATGGTAAGATTCGGCTGATTAAATCTGGCGAGAGTGCTGCTAGCATTTCATTAGATGAGCTAAGAGAAGGATTGTTCTAGTTTGAAAGATCTCAGCACAAGCAGGCCAGGAGTACAGGTTCAAAAGATAAAGTGGATACGTGCAGGCTCAACGATGATGCTGGCCTCTCAAAGAAAAGAAAAACGACGATGCTGCTTCACCGAAGCGAAATTTGTTGTAGCAGGCATGTGAACCTTGTCCTGGCCGCCCTTCCAGTCGTATTTTCATTATCAACATCCTTTAATGTACTCTTGATTAACATCTTAGCAGTCAAATTTACAGTAGTGTCATGGTGTGTATGTGTTGGGAACGTATTGCTTTGGTGGCTATACGTCTTGTCACGACAACACGACGATGTAACGATGAATTCTCGTTGTTTTGGTACACGGGGTAGATGCGCTCAGCCTAACTGCTCGTGTCGCAACTCGCAAATGCAGCGTCTTTTTCTGTCGAGTTGTCAGA
- >LOC_Os05g43440.2 cDNA ATAACTCAACCTTTTGATCTCGCTACGAAGCTCCTCCGCTCCACCCAGGCACGAGCGCCGCCGCGGCCGACTCCACCGGACACCACCCAACGCCGCCAGCCGCCTCCTCCCATCCTCCCTCGATCCGTACGGATAGCCTCCCCGCTCGCTCGGTCTGCGCCCGTCGTCGTCGTCCCGCCGTCTTATCCCTCCCGCGACTCGGCGACGCGCGAAGGCCTCCGGCGCGGGGCTGAAGATTTACCATGAATTCTCTCAGCAATGGATTACTGAAGGGCTTGAGGAGGGTCTTAGAACAGCAGAGAAAACCAATTGATTTCTACAGAAAATCTCAAGCTTGGAGTTCTACTGTTTCCTTTTCTGATATTGATGAGAAGAGTGAAATGGGAGGTGATGATGATTATACAGATTCAAGACGAGAGTTAGAACCCCAAAGCGTAGACCCCAAGAAGGGCTGGGGATTCCGTGGTGTTCACAGGGCTATAATATGCGGAAAAGTCGGACAGGTTCCTGTGCAGAAAATTTTAAGGAATGGTCGTACAGTGACTGTTTTTACAGTTGGAACTGGTGGCATGTTTGACCAGAGGGTAGTAGGGGATGCAGATCTGCCAAAGCCAGCTCAGTGGCATCGGATAGCCATTCATAATGACCAGCTAGGTGCTTTTGCTGTCCAGAAGCTGGTGAAGAATTCTGCAGTTTATGTTGAGGGTGATATTGAAACCAGAGTATACAATGACAGCATTAATGATCAAGTGAAAAATATACCAGAGATTTGTCTTCGACGCGATGGTAAGATTCGGCTGATTAAATCTGGCGAGAGTGCTGCTAGCATTTCATTAGATGAGCTAAGAGAAGGATTGTTCTAGTTTGAAAGATCTCAGCACAAGCAGGCCAGGAGTACAGGTTCAAAAGATAAAGTGGATACGTGCAGGCTCAACGATGATGCTGGCCTCTCAAAGAAAAGAAAAACGACGATGCTGCTTCACCGAAGCGAAATTTGTTGTAGCAGGCATGTGAACCTTGTCCTGGCCGCCCTTCCAGTCGTATTTTCATTATCAACATCCTTTAATGTACTCTTGATTAACATCTTAGCAGTCAAATTTACAGTAGTGTCATGGTGTGTATGTGTTGGGAACGTATTGCTTTGGTGGCTATACGTCTTGTCACGACAACACGACGATGTAACGATGAATTCTCGTTGTTTTGGTACACGGGGTAGATGCGCTCAGCCTAACTGCTCGTGTCGCAACTCGCAAATGCAGCGTCTTTTTCTGTCGAGTTGTCAGA
CDS Sequence
- >LOC_Os05g43440.1 CDS ATGAATTCTCTCAGCAATGGATTACTGAAGGGCTTGAGGAGGGTCTTAGAACAGCAGAGAAAACCAATTGATTTCTACAGAAAATCTCAAGCTTGGAGTTCTACTGTTTCCTTTTCTGATATTGATGAGAAGAGTGAAATGGGAGGTGATGATGATTATACAGATTCAAGACGAGAGTTAGAACCCCAAAGCGTAGACCCCAAGAAGGGCTGGGGATTCCGTGGTGTTCACAGGGCTATAATATGCGGAAAAGTCGGACAGGTTCCTGTGCAGAAAATTTTAAGGAATGGTCGTACAGTGACTGTTTTTACAGTTGGAACTGGTGGCATGTTTGACCAGAGGGTAGTAGGGGATGCAGATCTGCCAAAGCCAGCTCAGTGGCATCGGATAGCCATTCATAATGACCAGCTAGGTGCTTTTGCTGTCCAGAAGCTGGTGAAGAATTCTGCAGTTTATGTTGAGGGTGATATTGAAACCAGAGTATACAATGACAGCATTAATGATCAAGTGAAAAATATACCAGAGATTTGTCTTCGACGCGATGGTAAGATTCGGCTGATTAAATCTGGCGAGAGTGCTGCTAGCATTTCATTAGATGAGCTAAGAGAAGGATTGTTCTAG
- >LOC_Os05g43440.2 CDS ATGAATTCTCTCAGCAATGGATTACTGAAGGGCTTGAGGAGGGTCTTAGAACAGCAGAGAAAACCAATTGATTTCTACAGAAAATCTCAAGCTTGGAGTTCTACTGTTTCCTTTTCTGATATTGATGAGAAGAGTGAAATGGGAGGTGATGATGATTATACAGATTCAAGACGAGAGTTAGAACCCCAAAGCGTAGACCCCAAGAAGGGCTGGGGATTCCGTGGTGTTCACAGGGCTATAATATGCGGAAAAGTCGGACAGGTTCCTGTGCAGAAAATTTTAAGGAATGGTCGTACAGTGACTGTTTTTACAGTTGGAACTGGTGGCATGTTTGACCAGAGGGTAGTAGGGGATGCAGATCTGCCAAAGCCAGCTCAGTGGCATCGGATAGCCATTCATAATGACCAGCTAGGTGCTTTTGCTGTCCAGAAGCTGGTGAAGAATTCTGCAGTTTATGTTGAGGGTGATATTGAAACCAGAGTATACAATGACAGCATTAATGATCAAGTGAAAAATATACCAGAGATTTGTCTTCGACGCGATGGTAAGATTCGGCTGATTAAATCTGGCGAGAGTGCTGCTAGCATTTCATTAGATGAGCTAAGAGAAGGATTGTTCTAG
Protein Sequence
- >LOC_Os05g43440.1 protein MNSLSNGLLKGLRRVLEQQRKPIDFYRKSQAWSSTVSFSDIDEKSEMGGDDDYTDSRRELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTVGTGGMFDQRVVGDADLPKPAQWHRIAIHNDQLGAFAVQKLVKNSAVYVEGDIETRVYNDSINDQVKNIPEICLRRDGKIRLIKSGESAASISLDELREGLF*
- >LOC_Os05g43440.2 protein MNSLSNGLLKGLRRVLEQQRKPIDFYRKSQAWSSTVSFSDIDEKSEMGGDDDYTDSRRELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTVGTGGMFDQRVVGDADLPKPAQWHRIAIHNDQLGAFAVQKLVKNSAVYVEGDIETRVYNDSINDQVKNIPEICLRRDGKIRLIKSGESAASISLDELREGLF*