Gene Details:
- MSU gene ID: LOC_Os05g48800
- RAPdb gene ID: Os05g0562200
- Gene Symbol: OsDi19-1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The changes in expression of few auxin and ABA associated genes, such as OsIAA13, OsIAA20, ILL8, OsbZIP12, OsPP2C51, OsDi19-1 and OsHOX24, among others, were validated under high-temperature conditions using RT-qPCR.
Function-related keywords:
Literature:
- Dynamic genome-wide association analysis and identification of candidate genes involved in anaerobic germination tolerance in rice . DOI: 10.1186/s12284-020-00444-x ; PMID: 33409869
- A comprehensive transcriptome analysis of contrasting rice cultivars highlights the role of auxin and ABA responsive genes in heat stress response . DOI: 10.1016/j.ygeno.2021.03.007 ; PMID: 33705886
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g48800.3 cDNA ACGCTGTGGGCATTTGGCGCGAACGCCGCCGGCGCCGCGGCGTGGCCCCACCAATCCACCATACGGTGGGCGGCGACAAAGGCGACGCGGCGTGTTTCCGTTTCACGGCGGGGTAAGAGTAAAACCGCCCAAAAACACCGGGAGGCAGCGGCAGCCACCGGCTTGGCTGGTGAGGAGTCGATGACGCGGCGGGGGACGGCGACCTCGCGAGTCGCGACCCGGTGCCCAAAGAATAAAAAAAAAAACCCGCGGTATACCTAGCTCCATTCCTCACTCCTCCCCCGCATCTCACCTCACCTCACCTCCCGATAAGGCACGAGGAGACTATCTCCTCCCCCTCCTCCTCCTCTCCCCGCCGACGACCCCGCCGAGCTACATCTCCGCCGTGCTGATCGCGTGGAGCCGAGGAGAGGAGCGGCGGCCAACGCTACGAGGAGAGGAGAGTGGGGGAGGGGAGGGGAGCGAGCCTTATCTTACCCGCTCCGCCGAAGCCTATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAATAAATCAAGATGAGCCTAAGTAGTCGATAGATGCATGGGTAAATCCTGGTGCATATTTGCATAGATAAGTGCCCGGTCAAATTGCTGAAGGTAATATCCATGGCAGATAGGCACGCTTCTGCGGCACCAGGCGTCGTTTCCTCCCGTAAGGTGCAGAGTTGATGTGGGCACGGGGGCATCTTAAGTGTTATTGTAGCCGGTCTGTAATCTGTATCTCCAGTTCCATAACAATCCGCGATCAGCATACGATACACGTAGCAGATCGCGGTTGTGTTTGTAGCGCTTCTATGTTTAGAAGCATTGGTTTCTTGTACCAACGTAATAATTATGTTACGGGACAGCAGAATGGTATGCAGTTTGTCTACTTCTGTGAGAGTATAATAAACCAAGTTTACAACTGGTTGGTTTTGGAAGATTATGCTGTAAGATGAAGCATCTGTAACGTGTTGTACGTGATGGTATCACTTGTACCGTGCCACTGCATGACGCTGTAACAGTCTTATGGAATGGATCGATACATGGGGGATGGGGGGTGTTTAGACGAGGGTGTAAA
- >LOC_Os05g48800.2 cDNA ACGCTGTGGGCATTTGGCGCGAACGCCGCCGGCGCCGCGGCGTGGCCCCACCAATCCACCATACGGTGGGCGGCGACAAAGGCGACGCGGCGTGTTTCCGTTTCACGGCGGGGTAAGAGTAAAACCGCCCAAAAACACCGGGAGGCAGCGGCAGCCACCGGCTTGGCTGGTGAGGAGTCGATGACGCGGCGGGGGACGGCGACCTCGCGAGTCGCGACCCGGTGCCCAAAGAATAAAAAAAAAAACCCGCGGTATACCTAGCTCCATTCCTCACTCCTCCCCCGCATCTCACCTCACCTCACCTCCCGATAAGGCACGAGGAGACTATCTCCTCCCCCTCCTCCTCCTCTCCCCGCCGACGACCCCGCCGAGCTACATCTCCGCCGTGCTGATCGCGTGGAGCCGAGGAGAGGAGCGGCGGCCAACGCTACGAGGAGAGGAGAGTGGGGGAGGGGAGGGGAGCGAGCCTTATCTTACCCGCTCCGCCGAAGCCTATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAATAAATCAAGATGAGCCTAAGTAGTCGATAGATGCATGGGTAAATCCTGGTGCATATTTGCATAGATAAGTGCCCGGTCAAATTGCTGAAGGTAATATCCATGGCAGATAGGCACGCTTCTGCGGCACCAGGCGTCGTTTCCTCCCGTAAGGTGCAGAGTTGATGTGGGCACGGGGGCATCTTAAGTGTTATTGTAGCCGGTCTGTAATCTGTATCTCCAGTTCCATAACAATCCGCGATCAGCATACGATACACGTAGCAGATCGCGGTTGTGTTTGTAGCGCTTCTATGTTTAGAAGCATTGGTTTCTTGTACCAACGTAATAATTATGTTACGGGACAGCAGAATGGTATGCAGTTTGTCTACTTCTGTGAGAGTATAATAAACCAAGTTTACAACTGGTTGGTTTTGGAAGATTATGCTGTAAGATGAAGCATCTGTAACGTGTTGTACGTGATGGTATCACTTGTACCGTGCCACTGCATGACGCTGTAACAGTCTTATGGAATGGATCGATACATGGGGGATGGGGGGTGTTTAGACGAGGGTGTAAA
- >LOC_Os05g48800.1 cDNA ACGCTGTGGGCATTTGGCGCGAACGCCGCCGGCGCCGCGGCGTGGCCCCACCAATCCACCATACGGTGGGCGGCGACAAAGGCGACGCGGCGTGTTTCCGTTTCACGGCGGGGTAAGAGTAAAACCGCCCAAAAACACCGGGAGGCAGCGGCAGCCACCGGCTTGGCTGGTGAGGAGTCGATGACGCGGCGGGGGACGGCGACCTCGCGAGTCGCGACCCGGTGCCCAAAGAATAAAAAAAAAAACCCGCGGTATACCTAGCTCCATTCCTCACTCCTCCCCCGCATCTCACCTCACCTCACCTCCCGATAAGGCACGAGGAGACTATCTCCTCCCCCTCCTCCTCCTCTCCCCGCCGACGACCCCGCCGAGCTACATCTCCGCCGTGCTGATCGCGTGGAGCCGAGGAGAGGAGCGGCGGCCAACGCTACGAGGAGAGGAGAGTGGGGGAGGGGAGGGGAGCGAGCCTTATCTTACCCGCTCCGCCGAAGCCTATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAATAAATCAAGATGAGCCTAAGTAGTCGATAGATGCATGGGTAAATCCTGGTGCATATTTGCATAGATAAGTGCCCGGTCAAATTGCTGAAGGTAATATCCATGGCAGATAGGCACGCTTCTGCGGCACCAGGCGTCGTTTCCTCCCGTAAGGTGCAGAGTTGATGTGGGCACGGGGGCATCTTAAGTGTTATTGTAGCCGGTCTGTAATCTGTATCTCCAGTTCCATAACAATCCGCGATCAGCATACGATACACGTAGCAGATCGCGGTTGTGTTTGTAGCGCTTCTATGTTTAGAAGCATTGGTTTCTTGTACCAACGTAATAATTATGTTACGGGACAGCAGAATGGTATGCAGTTTGTCTACTTCTGTGAGAGTATAATAAACCAAGTTTACAACTGGTTGGTTTTGGAAGATTATGCTGTAAGATGAAGCATCTGTAACGTGTTGTACGTGATGGTATCACTTGTACCGTGCCACTGCATGACGCTGTAACAGTCTTATGGAATGGATCGATACATGGGGGATGGGGGGTGTTTAGACGAGGGTGTAAA
CDS Sequence
- >LOC_Os05g48800.3 CDS ATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAA
- >LOC_Os05g48800.2 CDS ATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAA
- >LOC_Os05g48800.1 CDS ATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAA
Protein Sequence
- >LOC_Os05g48800.3 protein MDSEHWISRLAAAKRFYAAQLGHADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLCAHLEEEHPFEPHAANRRRLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISIPDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD*
- >LOC_Os05g48800.2 protein MDSEHWISRLAAAKRFYAAQLGHADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLCAHLEEEHPFEPHAANRRRLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISIPDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD*
- >LOC_Os05g48800.1 protein MDSEHWISRLAAAKRFYAAQLGHADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLCAHLEEEHPFEPHAANRRRLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISIPDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD*