Gene Details:
- MSU gene ID: LOC_Os05g50930
- RAPdb gene ID: Os05g0586600
- Gene Symbol: OsSIG5
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The N-terminal region of OsSIG5 conferred import of green fluorescent protein into the chloroplast.
Function-related keywords:
Literature:
- Two novel nuclear genes, OsSIG5 and OsSIG6, encoding potential plastid sigma factors of RNA polymerase in rice: tissue-specific and light-responsive gene expression . DOI: 10.1093/pcp/pcl050 ; PMID: 17148693
Related News:
Gene Resources:
- NCBI ID: AB096071
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os05g50930.1 cDNA ATCTTCTCGCCTGAGATTCCGTCGACGCCATTGCTTGCTTGCTTGTTGCTTCCATTCCATTCCATTCCACACACGAGTGAACGAGCGGGGAAGGTTCTAGAAGGTTCGGTTAGAGTTTTCTGGTCTGCCATGGCGTCCACTGTGACGACGCCGAGCCGGCCGGTATCCGCCGGGTGCCACCGGCGCTCGCCGCGGCGGTCAGCGCCCGTCGTGCTCTCCCTCGGCGGCGGGCCGCGGCGGCGCACGCCGTCGTCCACCAGCTGCTCGGCGCTCGCGTCGCCGGCGAAGCAGGGCACGGCCAAGCTCCCTCCGCCGCAGCCGACGGCGTCGAGGACCGCGGCGGCCGACGCGGAGCGGGAGCGGGAGCGGACGGACTACAACGAGGTGGCCGCCGCGCTGGAGAGCATCTACAAGCTGAGCCCCGCCGTGGTCGAGGAGAAGGACGCCGACGAGGAGGACGAGAAGAGCAAACAGACCAAGCGGAAGAGAAAAGGCAGAGTGGGGAGGAGCCGGAACGCGACGGTGACGGTGAGGAGCAGCCGGAGGAGGAGGCGGGGACAGAGGATGGACCTGGGGAAGAGGGTGGAGATGAGGAGGAGGGAGGAAGAAGAGGGCGGCGGCGGCGCCGGCAAGGTGGAAGACGAGGAGCGGGGGTTCGAGGAGATGCTGCTCCGGGAGCACGCCGTGTCCACCGACATGGGCAGCCTCGACTGGAAGCGGATGAAGATCCCTCCCGTGCTCACCTCCGCCCAGAGCATCCGCCTCTTCAGGATCATGCAGCCCATGAAGGCGATCATGGAAATGAAGGAGAACCTGGAGAACGAAGTGCAGAGCGAGCCAAACGACGCACAGCTCGCCGAGGCCATGAACATGTCCGTTCTTCAGATGAGGCGCCATCTCGAGGTCGGCCGAGCTGCCAGGAACAAGCTCATCAAGCATAATCTCCGGCTGGTGCTGTACACGATCAACAAGTACTACCCGGACATGTCCAACGACGAGAGGTTCGACGACATCTGCCAGGCGGGCGCCAACGGCTTGATCACGGCGATCGACCGGTTCGAGCCCAAGCGCGGCTTCCGCATCTCCACCTACGCCCTCTTCTGGATCCGCCACTCCATCGTCCGCGCCATCACCCTCTCCAACTTCACCCGCTTCCCCTTCGCCATGGAATCCGAGAGGCAGGAGATCCACAGGGCTCGGGAGGAGCTGGCGTTCGAGCTGGGGAGGGCGCCGACGGAGGAGGAGGTGATGAAGAAGGTGGGGCTGTCTCCGGCGAGGTACCGCGACGTGGTGCGGATGACGAGGCCCACCTACTCCCTCCACGCGCGTAACAGGGTCACCCAGGAGGAGCTCATCAACGAGGTCACCGACGACGACGCCATCGGCGTCGACACCAGCAGCCACAACACCCTCCTCCGCCTCGCCATCGACGACCTCCTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTTCGGGCTGGACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTCGAGGGAGATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGCGAGTGGAATACCTGCGCAGATACATGTGAAAACCACCATGCAATCGTCTCGTCTCTCTGCTGTGCATAAAACATGTAGTACAAGCATGTATTCCTAGCAATCTTACTAATTCCCCAAACCTGCATAGCATTAGCAAATACCAACAACCACAGGTATTCATTCTACTCTGCATATTCTGCTGTATATAATTTCTGCATGATCCCCTCTGCATTGCAGATTACAGATACAAAATACACTGAGATGATTCCGTGTTATAGATACAGGAACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCACGAGTTTTTTTTCCAAGTGAGGTTGCGGTACATATGCACCTCAGATGTAAGTAATTCTTACTTAGCATATAGATACGGTGCAGGGGATGATCCGATCCCTGCTTAGCTTAGCTCATACGCTGTGCATTCAAAAGAAAAGACATTTCCTTTTCCTATCAACTGATGCTCAGTCTGTATAATACTTTCTGAAGTCTGAACCTGAAGAATTGAGTAGCAACT
- >LOC_Os05g50930.2 cDNA ATCTTCTCGCCTGAGATTCCGTCGACGCCATTGCTTGCTTGCTTGTTGCTTCCATTCCATTCCATTCCACACACGAGTGAACGAGCGGGGAAGGTTCTAGAAGGTTCGGTTAGAGTTTTCTGGTCTGCCATGGCGTCCACTGTGACGACGCCGAGCCGGCCGGTATCCGCCGGGTGCCACCGGCGCTCGCCGCGGCGGTCAGCGCCCGTCGTGCTCTCCCTCGGCGGCGGGCCGCGGCGGCGCACGCCGTCGTCCACCAGCTGCTCGGCGCTCGCGTCGCCGGCGAAGCAGGGCACGGCCAAGCTCCCTCCGCCGCAGCCGACGGCGTCGAGGACCGCGGCGGCCGACGCGGAGCGGGAGCGGGAGCGGACGGACTACAACGAGGTGGCCGCCGCGCTGGAGAGCATCTACAAGCTGAGCCCCGCCGTGGTCGAGGAGAAGGACGCCGACGAGGAGGACGAGAAGAGCAAACAGACCAAGCGGAAGAGAAAAGGCAGAGTGGGGAGGAGCCGGAACGCGACGGTGACGGTGAGGAGCAGCCGGAGGAGGAGGCGGGGACAGAGGATGGACCTGGGGAAGAGGGTGGAGATGAGGAGGAGGGAGGAAGAAGAGGGCGGCGGCGGCGCCGGCAAGGTGGAAGACGAGGAGCGGGGGTTCGAGGAGATGCTGCTCCGGGAGCACGCCGTGTCCACCGACATGGGCAGCCTCGACTGGAAGCGGATGAAGATCCCTCCCGTGCTCACCTCCGCCCAGAGCATCCGCCTCTTCAGGATCATGCAGCCCATGAAGGCGATCATGGAAATGAAGGAGAACCTGGAGAACGAAGTGCAGAGCGAGCCAAACGACGCACAGCTCGCCGAGGCCATGAACATGTCCGTTCTTCAGATGAGGCGCCATCTCGAGGTCGGCCGAGCTGCCAGGAACAAGCTCATCAAGCATAATCTCCGGCTGGTGCTGTACACGATCAACAAGTACTACCCGGACATGTCCAACGACGAGAGGTTCGACGACATCTGCCAGGCGGGCGCCAACGGCTTGATCACGGCGATCGACCGGTTCGAGCCCAAGCGCGGCTTCCGCATCTCCACCTACGCCCTCTTCTGGATCCGCCACTCCATCGTCCGCGCCATCACCCTCTCCAACTTCACCCGCTTCCCCTTCGCCATGGAATCCGAGAGGCAGGAGATCCACAGGGCTCGGGAGGAGCTGGCGTTCGAGCTGGGGAGGGCGCCGACGGAGGAGGAGGTGATGAAGAAGGTGGGGCTGTCTCCGGCGAGGTACCGCGACGTGGTGCGGATGACGAGGCCCACCTACTCCCTCCACGCGCGTAACAGGGTCACCCAGGAGGAGCTCATCAACGAGGTCACCGACGACGACGCCATCGGCGTCGACACCAGCAGCCACAACACCCTCCTCCGCCTCGCCATCGACGACCTCCTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTTCGGGCTGGACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTCGAGGGAGATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGCGAGTGGAATACCTGCGCAGATACATGTGAAAACCACCATGCAATCGTCTCGTCTCTCTGCTGTGCATAAAACATGTAGTACAAGCATGTATTCCTAGCAATCTTACTAATTCCCCAAACCTGCATAGCATTAGCAAATACCAACAACCACAGGTATTCATTCTACTCTGCATATTCTGCTGTATATAATTTCTGCATGATCCCCTCTGCATTGCAGATTACAGATACAAAATACACTGAGATGATTCCGTGTTATAGATACAGGAACGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCACGAGTTTTTTTTCCAAGTGAGGTTGCGGTACATATGCACCTCAGATGTAAGTAATTCTTACTTAGCATATAGATACGGTGCAGGGGATGATCCGATCCCTGCTTAGCTTAGCTCATACGCTGTGCATTCAAAAGAAAAGACATTTCCTTTTCCTATCAACTGATGCTCAGTCTGTATAATACTTTCTGAAGTCTGAACCTGAAGAATTGAGTAGCAACT
CDS Sequence
- >LOC_Os05g50930.1 CDS ATGGCGTCCACTGTGACGACGCCGAGCCGGCCGGTATCCGCCGGGTGCCACCGGCGCTCGCCGCGGCGGTCAGCGCCCGTCGTGCTCTCCCTCGGCGGCGGGCCGCGGCGGCGCACGCCGTCGTCCACCAGCTGCTCGGCGCTCGCGTCGCCGGCGAAGCAGGGCACGGCCAAGCTCCCTCCGCCGCAGCCGACGGCGTCGAGGACCGCGGCGGCCGACGCGGAGCGGGAGCGGGAGCGGACGGACTACAACGAGGTGGCCGCCGCGCTGGAGAGCATCTACAAGCTGAGCCCCGCCGTGGTCGAGGAGAAGGACGCCGACGAGGAGGACGAGAAGAGCAAACAGACCAAGCGGAAGAGAAAAGGCAGAGTGGGGAGGAGCCGGAACGCGACGGTGACGGTGAGGAGCAGCCGGAGGAGGAGGCGGGGACAGAGGATGGACCTGGGGAAGAGGGTGGAGATGAGGAGGAGGGAGGAAGAAGAGGGCGGCGGCGGCGCCGGCAAGGTGGAAGACGAGGAGCGGGGGTTCGAGGAGATGCTGCTCCGGGAGCACGCCGTGTCCACCGACATGGGCAGCCTCGACTGGAAGCGGATGAAGATCCCTCCCGTGCTCACCTCCGCCCAGAGCATCCGCCTCTTCAGGATCATGCAGCCCATGAAGGCGATCATGGAAATGAAGGAGAACCTGGAGAACGAAGTGCAGAGCGAGCCAAACGACGCACAGCTCGCCGAGGCCATGAACATGTCCGTTCTTCAGATGAGGCGCCATCTCGAGGTCGGCCGAGCTGCCAGGAACAAGCTCATCAAGCATAATCTCCGGCTGGTGCTGTACACGATCAACAAGTACTACCCGGACATGTCCAACGACGAGAGGTTCGACGACATCTGCCAGGCGGGCGCCAACGGCTTGATCACGGCGATCGACCGGTTCGAGCCCAAGCGCGGCTTCCGCATCTCCACCTACGCCCTCTTCTGGATCCGCCACTCCATCGTCCGCGCCATCACCCTCTCCAACTTCACCCGCTTCCCCTTCGCCATGGAATCCGAGAGGCAGGAGATCCACAGGGCTCGGGAGGAGCTGGCGTTCGAGCTGGGGAGGGCGCCGACGGAGGAGGAGGTGATGAAGAAGGTGGGGCTGTCTCCGGCGAGGTACCGCGACGTGGTGCGGATGACGAGGCCCACCTACTCCCTCCACGCGCGTAACAGGGTCACCCAGGAGGAGCTCATCAACGAGGTCACCGACGACGACGCCATCGGCGTCGACACCAGCAGCCACAACACCCTCCTCCGCCTCGCCATCGACGACCTCCTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTTCGGGCTGGACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTCGAGGGAGATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGCGAGTGGAATACCTGCGCAGATACATGTGA
- >LOC_Os05g50930.2 CDS ATGGCGTCCACTGTGACGACGCCGAGCCGGCCGGTATCCGCCGGGTGCCACCGGCGCTCGCCGCGGCGGTCAGCGCCCGTCGTGCTCTCCCTCGGCGGCGGGCCGCGGCGGCGCACGCCGTCGTCCACCAGCTGCTCGGCGCTCGCGTCGCCGGCGAAGCAGGGCACGGCCAAGCTCCCTCCGCCGCAGCCGACGGCGTCGAGGACCGCGGCGGCCGACGCGGAGCGGGAGCGGGAGCGGACGGACTACAACGAGGTGGCCGCCGCGCTGGAGAGCATCTACAAGCTGAGCCCCGCCGTGGTCGAGGAGAAGGACGCCGACGAGGAGGACGAGAAGAGCAAACAGACCAAGCGGAAGAGAAAAGGCAGAGTGGGGAGGAGCCGGAACGCGACGGTGACGGTGAGGAGCAGCCGGAGGAGGAGGCGGGGACAGAGGATGGACCTGGGGAAGAGGGTGGAGATGAGGAGGAGGGAGGAAGAAGAGGGCGGCGGCGGCGCCGGCAAGGTGGAAGACGAGGAGCGGGGGTTCGAGGAGATGCTGCTCCGGGAGCACGCCGTGTCCACCGACATGGGCAGCCTCGACTGGAAGCGGATGAAGATCCCTCCCGTGCTCACCTCCGCCCAGAGCATCCGCCTCTTCAGGATCATGCAGCCCATGAAGGCGATCATGGAAATGAAGGAGAACCTGGAGAACGAAGTGCAGAGCGAGCCAAACGACGCACAGCTCGCCGAGGCCATGAACATGTCCGTTCTTCAGATGAGGCGCCATCTCGAGGTCGGCCGAGCTGCCAGGAACAAGCTCATCAAGCATAATCTCCGGCTGGTGCTGTACACGATCAACAAGTACTACCCGGACATGTCCAACGACGAGAGGTTCGACGACATCTGCCAGGCGGGCGCCAACGGCTTGATCACGGCGATCGACCGGTTCGAGCCCAAGCGCGGCTTCCGCATCTCCACCTACGCCCTCTTCTGGATCCGCCACTCCATCGTCCGCGCCATCACCCTCTCCAACTTCACCCGCTTCCCCTTCGCCATGGAATCCGAGAGGCAGGAGATCCACAGGGCTCGGGAGGAGCTGGCGTTCGAGCTGGGGAGGGCGCCGACGGAGGAGGAGGTGATGAAGAAGGTGGGGCTGTCTCCGGCGAGGTACCGCGACGTGGTGCGGATGACGAGGCCCACCTACTCCCTCCACGCGCGTAACAGGGTCACCCAGGAGGAGCTCATCAACGAGGTCACCGACGACGACGCCATCGGCGTCGACACCAGCAGCCACAACACCCTCCTCCGCCTCGCCATCGACGACCTCCTGGATTCGCTGAAGCCCAAGGAGAGCGTGGTGATCCGGCAGAGGTTCGGGCTGGACGGGAGGGGGAAGCGGACGCTGAGCGAGATCGCCGGAAACCTCAACATCTCGAGGGAGATGGTGCGCAAGTACGAGCTCAAGGCGCTCATGAAGCTCAAGCACCCCACGCGAGTGGAATACCTGCGCAGATACATGTGA
Protein Sequence
- >LOC_Os05g50930.1 protein MASTVTTPSRPVSAGCHRRSPRRSAPVVLSLGGGPRRRTPSSTSCSALASPAKQGTAKLPPPQPTASRTAAADAERERERTDYNEVAAALESIYKLSPAVVEEKDADEEDEKSKQTKRKRKGRVGRSRNATVTVRSSRRRRRGQRMDLGKRVEMRRREEEEGGGGAGKVEDEERGFEEMLLREHAVSTDMGSLDWKRMKIPPVLTSAQSIRLFRIMQPMKAIMEMKENLENEVQSEPNDAQLAEAMNMSVLQMRRHLEVGRAARNKLIKHNLRLVLYTINKYYPDMSNDERFDDICQAGANGLITAIDRFEPKRGFRISTYALFWIRHSIVRAITLSNFTRFPFAMESERQEIHRAREELAFELGRAPTEEEVMKKVGLSPARYRDVVRMTRPTYSLHARNRVTQEELINEVTDDDAIGVDTSSHNTLLRLAIDDLLDSLKPKESVVIRQRFGLDGRGKRTLSEIAGNLNISREMVRKYELKALMKLKHPTRVEYLRRYM*
- >LOC_Os05g50930.2 protein MASTVTTPSRPVSAGCHRRSPRRSAPVVLSLGGGPRRRTPSSTSCSALASPAKQGTAKLPPPQPTASRTAAADAERERERTDYNEVAAALESIYKLSPAVVEEKDADEEDEKSKQTKRKRKGRVGRSRNATVTVRSSRRRRRGQRMDLGKRVEMRRREEEEGGGGAGKVEDEERGFEEMLLREHAVSTDMGSLDWKRMKIPPVLTSAQSIRLFRIMQPMKAIMEMKENLENEVQSEPNDAQLAEAMNMSVLQMRRHLEVGRAARNKLIKHNLRLVLYTINKYYPDMSNDERFDDICQAGANGLITAIDRFEPKRGFRISTYALFWIRHSIVRAITLSNFTRFPFAMESERQEIHRAREELAFELGRAPTEEEVMKKVGLSPARYRDVVRMTRPTYSLHARNRVTQEELINEVTDDDAIGVDTSSHNTLLRLAIDDLLDSLKPKESVVIRQRFGLDGRGKRTLSEIAGNLNISREMVRKYELKALMKLKHPTRVEYLRRYM*