Gene Details:
- MSU gene ID: LOC_Os06g12610
- RAPdb gene ID: Os06g0232300
- Gene Symbol: OsPIN1a
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- These data suggest that OsPIN1a and OsPIN1b are involved in root, shoot and inflorescence development in rice, whereas OsPIN1c and OsPIN1d mainly function in panicle formation.
Function-related keywords:
- shoot , panicle , development , inflorescence
Literature:
- Functional Divergence of PIN1 Paralogous Genes in Rice . DOI: 10.1093/pcp/pcz159 ; PMID: 31410483
- Cadmium Inhibits Lateral Root Emergence in Rice by Disrupting OsPIN-Mediated Auxin Distribution and the Protective Effect of OsHMA3 . DOI: 10.1093/pcp/pcaa150 ; PMID: 33300991
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os06g12610.1 cDNA ACCTTCCCCACCCTCATTGGCTCCCCCGCCTGCCTCCCCTTCTCCATCCACCAACTCGCCGCACACTCAACCCCGCCTCGCCGCCGCACACCACCCACCGGCGAAGAGAAGAAGTCGTGGTTTTTCTTGGCTGCAAGATGATAACGGGGGCGGACTTCTACCACGTGATGACGGCGATGGTGCCGCTGTACGTGGCGATGATCCTGGCGTACGGGTCGGTGAAGTGGTGGCGCATCTTCACGCCCGACCAGTGCTCCGGGATCAACCGCTTCGTGGCGCTCTTCGCCGTCCCGCTCCTCTCCTTCCACTTCATCTCCACCAACAACCCCTACACCATGAACCTCCGCTTCATCGCCGCCGACACCCTGCAGAAGCTCATCGTCCTCGCGCTCCTCACCCTGTGGAGCCACCTCTCCCGCCGCGGCTCCCTCGAGTGGACCATCACCCTCTTCTCCCTCTCCACGCTGCCCAACACGCTCGTCATGGGGATCCCGCTGCTGAAGGGGATGTACGGGGAGTTCTCCGGTAGCCTCATGGTGCAGATCGTGGTGCTCCAGTGCATCATCTGGTACACGCTGATGCTCTTCATGTTCGAGTACCGCGGCGCCAGGATCCTCATCACCGAGCAGTTCCCGGACACCGCGGGCGCCATCGCGTCCATCGTCGTGGACGCCGACGTCGTGTCGCTCGACGGGCGGAGGGACATGATCGAGACGGAGGCCGAGGTGAAGGAGGACGGCAAGATACACGTCACCGTGCGCCGCTCCAACGCGTCGCGCTCCGACGTCTACTCGCGGCGCTCCATGGGGTTCTCCAGCACCACGCCGCGGCCGAGCAACCTCACCAACGCCGAGATCTACTCGCTGCAGTCGTCGCGCAACCCGACGCCGCGGGGCTCCAGCTTCAACCACACTGACTTCTACTCCATGGTCGGGCGCAGCTCCAACTTCGCCGCCGGGGACGCGTTCGGGGTGCGCACCGGCGCCACGCCGCGGCCGTCCAACTACGAGGAGGACGCGGCGGCGCCCAACAAGGCCGGCAGCAAGTACGGGCAGTACCCGGCGCCCAACCCGGCCATGGCGGCGCCGCCCAAGCCCAAGAAGGCGGCCAACGGCCAGGCCAAGGGCGAGGACGGCAAAGACCTCCACATGTTCGTCTGGAGCTCCAGCGCGTCGCCCGTGTCCGACGTCTTCGGCAACGGCGCCGAGTACAACGACGCCGCCGCCGTCAAGGAGGTCCGCATGGCCGTCGCCTCGCCGCGCAAAGCGGACGGCGTGGAGAGGGACGACTTCAGCTTCGGGAACAGAGGCGTCGCCGAGAGGGACGCGGAGGCCGGCGACGAGAAGAGCGTGGCGGCGGCGGTGTCGGGTGAGCATGGCAAGCCTGGCTTGACGCCGGCGCCGACGGCGATGCCGCCGACGAGCGTGATGACGCGGCTCATCCTGATCATGGTGTGGCGCAAGCTCATCCGCAACCCCAACACCTACTCCAGCCTCATCGGCCTCATCTGGTCGCTCGTCTGCTTCCGGTGGAACTTCGAGATGCCGGCGATCATCCTGAAATCCATCTCCATCCTCTCCGACGCCGGCCTCGGCATGGCCATGTTCAGCCTCGGGCTGTTCATGGCGCTGCAGCCGCGGATCATCGCGTGCGGGAACAAGGTGGCGACGTTCGCCATGGCGGTGCGGTTCCTGACCGGCCCGGCCGTCATGGCCGCCGCCTCCATCGCCGTCGGCCTCCGCGGCACGCTCCTCCACGTCGCCATCGTGCAGGCAGCGTTGCCACAGGGCATTGTCCCCTTCGTCTTCGCCAAGGAGTACAGCGTGCACCCCGACATTCTCAGCACGGCGGTCATCTTTGGCATGCTCATCGCGCTGCCCATCACGCTGGTGTACTACATCCTGCTGGGGCTGTGACTGTGAACAACCACCACCAAGAACAGCATGTTTTTGCAGGTGAGGGTCGTCATGTTTGCAGCGAGTGCCGGGACAGAGGAGAAGACAAAGGGCTGCATGCATGCATCACGCTGCAGTCACCCACCAGTTCACCATGGAGGAGGAGGAGCAAGAAGCCAAGCAACCAAGCAGCAATGCAGTGCAGCAGCTGGGTTTTCATTAGAGTTTTTTTAGGTGTAGAGATCGATGGATGGGAGTATGGATAATTGTTTTAGGGCAGAGAGTTCCAAAAATTGCAGGCATGTGCAAAGGCTTTGGAGGGAGGGGAGGGGGAGGGGACAGGGTTCAGGTTTTTAGTACAGGGCCTGGGGGTTTATAGGGGAGTGAGAATGTGAGATGCATCGCTTGGCTGGGTTGGCTGGCCTTGTGGTGAAATGGGTGTGTGTCACTTTGGTGGAAAAAAAACAAATGGTTTAGTAGAGCTCTTGTTCATCCTACGGTATAGTAGTACTTTGGCATGGCACAATGCTTCGGCTTTGATTAGCAAGATTAATCAATAATACTAGTAATAGCT
CDS Sequence
- >LOC_Os06g12610.1 CDS ATGATAACGGGGGCGGACTTCTACCACGTGATGACGGCGATGGTGCCGCTGTACGTGGCGATGATCCTGGCGTACGGGTCGGTGAAGTGGTGGCGCATCTTCACGCCCGACCAGTGCTCCGGGATCAACCGCTTCGTGGCGCTCTTCGCCGTCCCGCTCCTCTCCTTCCACTTCATCTCCACCAACAACCCCTACACCATGAACCTCCGCTTCATCGCCGCCGACACCCTGCAGAAGCTCATCGTCCTCGCGCTCCTCACCCTGTGGAGCCACCTCTCCCGCCGCGGCTCCCTCGAGTGGACCATCACCCTCTTCTCCCTCTCCACGCTGCCCAACACGCTCGTCATGGGGATCCCGCTGCTGAAGGGGATGTACGGGGAGTTCTCCGGTAGCCTCATGGTGCAGATCGTGGTGCTCCAGTGCATCATCTGGTACACGCTGATGCTCTTCATGTTCGAGTACCGCGGCGCCAGGATCCTCATCACCGAGCAGTTCCCGGACACCGCGGGCGCCATCGCGTCCATCGTCGTGGACGCCGACGTCGTGTCGCTCGACGGGCGGAGGGACATGATCGAGACGGAGGCCGAGGTGAAGGAGGACGGCAAGATACACGTCACCGTGCGCCGCTCCAACGCGTCGCGCTCCGACGTCTACTCGCGGCGCTCCATGGGGTTCTCCAGCACCACGCCGCGGCCGAGCAACCTCACCAACGCCGAGATCTACTCGCTGCAGTCGTCGCGCAACCCGACGCCGCGGGGCTCCAGCTTCAACCACACTGACTTCTACTCCATGGTCGGGCGCAGCTCCAACTTCGCCGCCGGGGACGCGTTCGGGGTGCGCACCGGCGCCACGCCGCGGCCGTCCAACTACGAGGAGGACGCGGCGGCGCCCAACAAGGCCGGCAGCAAGTACGGGCAGTACCCGGCGCCCAACCCGGCCATGGCGGCGCCGCCCAAGCCCAAGAAGGCGGCCAACGGCCAGGCCAAGGGCGAGGACGGCAAAGACCTCCACATGTTCGTCTGGAGCTCCAGCGCGTCGCCCGTGTCCGACGTCTTCGGCAACGGCGCCGAGTACAACGACGCCGCCGCCGTCAAGGAGGTCCGCATGGCCGTCGCCTCGCCGCGCAAAGCGGACGGCGTGGAGAGGGACGACTTCAGCTTCGGGAACAGAGGCGTCGCCGAGAGGGACGCGGAGGCCGGCGACGAGAAGAGCGTGGCGGCGGCGGTGTCGGGTGAGCATGGCAAGCCTGGCTTGACGCCGGCGCCGACGGCGATGCCGCCGACGAGCGTGATGACGCGGCTCATCCTGATCATGGTGTGGCGCAAGCTCATCCGCAACCCCAACACCTACTCCAGCCTCATCGGCCTCATCTGGTCGCTCGTCTGCTTCCGGTGGAACTTCGAGATGCCGGCGATCATCCTGAAATCCATCTCCATCCTCTCCGACGCCGGCCTCGGCATGGCCATGTTCAGCCTCGGGCTGTTCATGGCGCTGCAGCCGCGGATCATCGCGTGCGGGAACAAGGTGGCGACGTTCGCCATGGCGGTGCGGTTCCTGACCGGCCCGGCCGTCATGGCCGCCGCCTCCATCGCCGTCGGCCTCCGCGGCACGCTCCTCCACGTCGCCATCGTGCAGGCAGCGTTGCCACAGGGCATTGTCCCCTTCGTCTTCGCCAAGGAGTACAGCGTGCACCCCGACATTCTCAGCACGGCGGTCATCTTTGGCATGCTCATCGCGCTGCCCATCACGCTGGTGTACTACATCCTGCTGGGGCTGTGA
Protein Sequence
- >LOC_Os06g12610.1 protein MITGADFYHVMTAMVPLYVAMILAYGSVKWWRIFTPDQCSGINRFVALFAVPLLSFHFISTNNPYTMNLRFIAADTLQKLIVLALLTLWSHLSRRGSLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILITEQFPDTAGAIASIVVDADVVSLDGRRDMIETEAEVKEDGKIHVTVRRSNASRSDVYSRRSMGFSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVGRSSNFAAGDAFGVRTGATPRPSNYEEDAAAPNKAGSKYGQYPAPNPAMAAPPKPKKAANGQAKGEDGKDLHMFVWSSSASPVSDVFGNGAEYNDAAAVKEVRMAVASPRKADGVERDDFSFGNRGVAERDAEAGDEKSVAAAVSGEHGKPGLTPAPTAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVCFRWNFEMPAIILKSISILSDAGLGMAMFSLGLFMALQPRIIACGNKVATFAMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPFVFAKEYSVHPDILSTAVIFGMLIALPITLVYYILLGL*