Gene Details:
- MSU gene ID: LOC_Os06g13640
- RAPdb gene ID: Os06g0245600
- Gene Symbol: RPL1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Analysis of the putative rice brassinosteroid receptor OsBRI1, a key hormone signaling gene, indicated that RPL1 may be involved in the regulation of epigenomic modification of the gene.
- These data suggest that RPL1 regulated phenotypic plasticity likely through its involvement in epigenetic processes affecting responses of the plant to phytohormones.
Function-related keywords:
Literature:
- RPL1, a gene involved in epigenetic processes regulates phenotypic plasticity in rice . DOI: 10.1093/mp/ssr091 ; PMID: 22131052
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os06g13640.2 cDNA GAGCCCGCGGCCGCGGGTTTCAAAAATTTCCCCAAAATCTCGTCCCCCCTTCGTCCCCGTCTCCTCCGCTCCCCCGCTCCACCCGCCGCCGCCGCGTCCGCTCTCGACGACGACCTCGAAGCGGCCGCCGGCCTCCATCCAGGGCCATACATCCATCCGCCATCTGCTACGCTTCTCCGCACCGATGGAGCAGCTCAACGCCAAGCTCTACCACAGAAGCGGAAGCTGCTCGACGAGGGGCTGGACCAGAAGCGGGCTGCCGACATCAACGAGCTCCGCCAAGCCATGAAAGATTGGGTGGCCGAGCTCCAGAGCGAGAACGAGCGCCTCGTTGCCAAGCTGACCCAAAAGGAGCAGCAGCTTGTGGAGGCACAGACGCTTTTACTTGATGAGACTCGGAAGACAAAGGAGCTCAATAGTGAAATATTGAAACTTCAGTGTCTCCTGGCTGAGAAGAATGATGCAAACCATATTGCGACAGGGTCTCCTGACACAACCGCCGAAATGACTATAGAAAATCAAACTCCAATTTCACCTGCAAAGAAGACGCCAAAGTCAAACAGCAGGGAGAGAAATATTCGCTCCATTGAAAAAGCGATTGTTCCTCGTAATGGCTTTCAGGAGGAAGGAAGAGATCTTGATTCCTGTAGAAGACATATGAGCATCTCAGGGAGTGCGACAGAAGAAAGTTCCAGTACCTGTATGTTTCATCTGCTGGCTGAATCAATGGTTGGGATGAAATTTTCAGTGAAGAACGAAACAGAAGGATTTTCACTTTCAGTCTCCCATGAAGCTAGTGGTTACAACTTCACTCTCACATGGGTAGACCAACCTGGTGGCAGTGAATGGTCATATCAGTACTCCTCGTTGGGCACCCTGGACAGGATAGCTATGGGCTGGATGAAGGAGGACATAAAATTCAGCTCGACCATGTGTCCTGTATTCTTCAAGCAGATATCGCACATCCTCAGGCAATGCTAAGCTCAACTGGGAAGCTTTGTTTGGGTTTAGCTTAGTTTCTGTACTGGACTTCTGCTAGATAGTGGACTGAAACTGACTTGTTTTAGAGGTGACACGAGGCTTTATGTATCCTTTCGTTTGTCCTTCGTTGTTCCTGTTGTGAACATACTAGTAACAATTAGCAAGTTATTCTGGGTGTTGGTTGCCGTATGTCTTTATGTATAGCCCCTGATTTGAACTCTGATGCTTTTGAAAATAAGAGTTTTGACATGGCTGCCCGATATATCATA
- >LOC_Os06g13640.1 cDNA GAGCCCGCGGCCGCGGGTTTCAAAAATTTCCCCAAAATCTCGTCCCCCCTTCGTCCCCGTCTCCTCCGCTCCCCCGCTCCACCCGCCGCCGCCGCGTCCGCTCTCGACGACGACCTCGAAGCGGCCGCCGGCCTCCATCCAGGGCCATACATCCATCCGCCATCTGCTACGCTTCTCCGCACCGATGGAGCAGCTCAACGCCAAGCTCTACCACAGAAGCGGAAGCTGCTCGACGAGGGGCTGGACCAGAAGCGGGCTGCCGACATCAACGAGCTCCGCCAAGCCATGAAAGATTGGGTGGCCGAGCTCCAGAGCGAGAACGAGCGCCTCGTTGCCAAGCTGACCCAAAAGGAGCAGCAGCTTGTGGAGGCACAGACGCTTTTACTTGATGAGACTCGGAAGACAAAGGAGCTCAATAGTGAAATATTGAAACTTCAGTGTCTCCTGGCTGAGAAGAATGATGCAAACCATATTGCGACAGGGTCTCCTGACACAACCGCCGAAATGACTATAGAAAATCAAACTCCAATTTCACCTGCAAAGAAGACGCCAAAGTCAAACAGCAGGGAGAGAAATATTCGCTCCATTGAAAAAGCGATTGTTCCTCGTAATGGCTTTCAGGAGGAAGGAAGAGATCTTGATTCCTGTAGAAGACATATGAGCATCTCAGGGAGTGCGACAGAAGAAAGTTCCAGTACCTGTATGTTTCATCTGCTGGCTGAATCAATGGTTGGGATGAAATTTTCAGTGAAGAACGAAACAGAAGGATTTTCACTTTCAGTCTCCCATGAAGCTAGTGGTTACAACTTCACTCTCACATGGGTAGACCAACCTGGTGGCAGTGAATGGTCATATCAGTACTCCTCGTTGGGCACCCTGGACAGGATAGCTATGGGCTGGATGAAGGAGGACATAAAATTCAGCTCGACCATGTGTCCTGTATTCTTCAAGCAGATATCGCACATCCTCAGGCAATGCTAAGCTCAACTGGGAAGCTTTGTTTGGGTTTAGCTTAGTTTCTGTACTGGACTTCTGCTAGATAGTGGACTGAAACTGACTTGTTTTAGAGGTGACACGAGGCTTTATGTATCCTTTCGTTTGTCCTTCGTTGTTCCTGTTGTGAACATACTAGTAACAATTAGCAAGTTATTCTGGGTGTTGGTTGCCGTATGTCTTTATGTATAGCCCCTGATTTGAACTCTGATGCTTTTGAAAATAAGAGTTTTGACATGGCTGCCCGATATATCATA
CDS Sequence
- >LOC_Os06g13640.2 CDS ATGAAAGATTGGGTGGCCGAGCTCCAGAGCGAGAACGAGCGCCTCGTTGCCAAGCTGACCCAAAAGGAGCAGCAGCTTGTGGAGGCACAGACGCTTTTACTTGATGAGACTCGGAAGACAAAGGAGCTCAATAGTGAAATATTGAAACTTCAGTGTCTCCTGGCTGAGAAGAATGATGCAAACCATATTGCGACAGGGTCTCCTGACACAACCGCCGAAATGACTATAGAAAATCAAACTCCAATTTCACCTGCAAAGAAGACGCCAAAGTCAAACAGCAGGGAGAGAAATATTCGCTCCATTGAAAAAGCGATTGTTCCTCGTAATGGCTTTCAGGAGGAAGGAAGAGATCTTGATTCCTGTAGAAGACATATGAGCATCTCAGGGAGTGCGACAGAAGAAAGTTCCAGTACCTGTATGTTTCATCTGCTGGCTGAATCAATGGTTGGGATGAAATTTTCAGTGAAGAACGAAACAGAAGGATTTTCACTTTCAGTCTCCCATGAAGCTAGTGGTTACAACTTCACTCTCACATGGGTAGACCAACCTGGTGGCAGTGAATGGTCATATCAGTACTCCTCGTTGGGCACCCTGGACAGGATAGCTATGGGCTGGATGAAGGAGGACATAAAATTCAGCTCGACCATGTGTCCTGTATTCTTCAAGCAGATATCGCACATCCTCAGGCAATGCTAA
- >LOC_Os06g13640.1 CDS ATGAAAGATTGGGTGGCCGAGCTCCAGAGCGAGAACGAGCGCCTCGTTGCCAAGCTGACCCAAAAGGAGCAGCAGCTTGTGGAGGCACAGACGCTTTTACTTGATGAGACTCGGAAGACAAAGGAGCTCAATAGTGAAATATTGAAACTTCAGTGTCTCCTGGCTGAGAAGAATGATGCAAACCATATTGCGACAGGGTCTCCTGACACAACCGCCGAAATGACTATAGAAAATCAAACTCCAATTTCACCTGCAAAGAAGACGCCAAAGTCAAACAGCAGGGAGAGAAATATTCGCTCCATTGAAAAAGCGATTGTTCCTCGTAATGGCTTTCAGGAGGAAGGAAGAGATCTTGATTCCTGTAGAAGACATATGAGCATCTCAGGGAGTGCGACAGAAGAAAGTTCCAGTACCTGTATGTTTCATCTGCTGGCTGAATCAATGGTTGGGATGAAATTTTCAGTGAAGAACGAAACAGAAGGATTTTCACTTTCAGTCTCCCATGAAGCTAGTGGTTACAACTTCACTCTCACATGGGTAGACCAACCTGGTGGCAGTGAATGGTCATATCAGTACTCCTCGTTGGGCACCCTGGACAGGATAGCTATGGGCTGGATGAAGGAGGACATAAAATTCAGCTCGACCATGTGTCCTGTATTCTTCAAGCAGATATCGCACATCCTCAGGCAATGCTAA
Protein Sequence
- >LOC_Os06g13640.2 protein MKDWVAELQSENERLVAKLTQKEQQLVEAQTLLLDETRKTKELNSEILKLQCLLAEKNDANHIATGSPDTTAEMTIENQTPISPAKKTPKSNSRERNIRSIEKAIVPRNGFQEEGRDLDSCRRHMSISGSATEESSSTCMFHLLAESMVGMKFSVKNETEGFSLSVSHEASGYNFTLTWVDQPGGSEWSYQYSSLGTLDRIAMGWMKEDIKFSSTMCPVFFKQISHILRQC*
- >LOC_Os06g13640.1 protein MKDWVAELQSENERLVAKLTQKEQQLVEAQTLLLDETRKTKELNSEILKLQCLLAEKNDANHIATGSPDTTAEMTIENQTPISPAKKTPKSNSRERNIRSIEKAIVPRNGFQEEGRDLDSCRRHMSISGSATEESSSTCMFHLLAESMVGMKFSVKNETEGFSLSVSHEASGYNFTLTWVDQPGGSEWSYQYSSLGTLDRIAMGWMKEDIKFSSTMCPVFFKQISHILRQC*