Gene Details:
- MSU gene ID: LOC_Os06g13810
- RAPdb gene ID: Os06g0247500
- Gene Symbol: PFP1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- However, mechanisms underlying the regulation of starch metabolism by PFP1 remain elusive.
- Map-based cloning revealed that PFP1-3 is a novel allele and encodes the regulatory β-subunit of PFP1 (PFP1β).
- This study addressed the function of PFP1 in rice floury endosperm and defective grainfilling.
- Concentrations of multiple lipid and glycolytic intermediates and trehalose metabolites were elevated in PFP1-3 endosperm, indicating that PFP1 modulates endosperm metabolism, potentially through reversible adjustments to metabolic fluxes.
Function-related keywords:
Literature:
- Pyrophosphate-fructose 6-phosphate 1-phosphotransferase (PFP1) regulates starch biosynthesis and seed development via heterotetramer formation in rice (Oryza sativa L.) . DOI: 10.1111/pbi.13173 ; PMID: 31131526
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os06g13810.3 cDNA AAGCGAATTTGAAGCTCGTGGTTTCGAGATGGGGGTGTTCGCGATCTGGATAGGATCGTGGTTTTAGCTAGTTAGAGTTGGTGTTCTCCAAACAAGCTTTGGCATCGAACGCGCACAGTTCTTAGATCTTGATCGATTTTGGTTGTTTAGCGAGGGCCAGAATTAAGAGATCTGCTTATTTTTTGATTGTGAGTTGTGTCCCGGTTGCACTGAAAAATCGAATAGGCACTAATGATATATTGTGGTTCCAAATATATTTCTTGATGAATTTGCTTGCCTTGTGTCGGACCAGATTACCTGCAGGAATATGCAAAAGGATCCGTCATGTATGGATTCAAGGGAGGTCCAGCTGGAGTCATGAAGTGCAAGTACGTTGAGCTCACTGCGGATTATGTGTACCCCTACAGAAACCAGGGTGGATTTGATATGATCTGCAGTGGTAGGGACAAGATTGAAACACCAGAGCAGTTCAAGCAAGCTGAAGACACTGTAAACAAACTTGATTTGGATGGGCTTGTTGTCATTGGTGGTGATGATTCAAACACAAACGCATGCCTTCTTGCTGAGTACTTCAGGGGGAAGAACATGAAAACTCGTGTCATTGGTTGCCCAAAGACTATTGATGGAGATCTGAAATGCAAGGAGGTTCCAACAAGCTTTGGGTTTGACACTGCTTGCAAGATATACTCTGAAATGATTGGTAATGTTATGACTGATGCACGCTCAACCGGGAAGTACTACCACTTTGTGAGGCTTATGGGACGTGCTGCTTCTCACATTACATTGGAGTGTGCTCTGCAAACACATCCTAATGTTGCACTCATTGGAGAAGAGGTTGCTGCAAAGAAGGAAACTCTTAAAAGTGTCACCGACTACATTACCGACATTGTCTGCAAGCGTGCAGAACTTGGTTACAACTATGGTGTGATCCTTATCCCAGAGGGTCTGATTGATTTCATCCCAGAGGTTCAAAAACTCATTGCAGAATTGAATGAAATTTTGGCGCATGATGTTGTTGATGAGGCAGGGGCTTGGAAAAGCAAGCTTCAACCAGAATCCAGGCAACTGTTTGACTTCCTGCCCAAAACCATCCAGGAGCAACTTTTGCTTGAAAGAGATCCTCATGGAAATGTTCAGGTTGCAAAAATTGAAACAGAGAAAATGCTTATTGCCATGGTTGAGACTGAATTGGAGAAGAGAAAAGCTGAGGGGAAGTACCCCGCACATTTCAGAGGCCAATCTCACTTCTTTGGATATGAAGGAAGATGTGGCCTTCCTACTATTTTTGATTCTAACTATTGCTATGCGTTAGGCTACGGTTCTGGGGCACTTCTCCAATGTGGGAAGACAGGACTGATTACGTCGGTTGGCAACCTCGCTGCTCCTGTGGAAGAATGGACCGTTGGTGGAACTGCATTGACATCGTTGATGGATGTTGAGAGGAGGCACGGAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAACCATTACATCAGCCCTGGTCCCATCCAGTTCAGTGGCCCTGGAAGCAACGATGCGAACCACACCTTGATGTTGGAACTCGGCGCCGAGGCATAGAGAGACACGACGATACCGACGTGTACCTTTTAAATTTTTTGTTCTTACAGTTTTGAAAAGTTGAGATGGAACCTCGCAGAGTGACCTGCAGGCTCCATATTTGTGGAGTGCTCAATAAGAGGTTCCATTGGGAGTTTCTGTGGAGTAGAGATATGTGTACCAATAATAACTGATGTTAGCTTTGCATGATCCATTGCTCCATTTTTACACAGAAGTTAACTTGGTTTTATTGTAGCTCTGGGTTTTGTTCAACTGGATGCGACGCTATAATTATGGGTTTTGTTCAACTGGATGCGACGCTATAATTATGAACATAAATAATCCAGGTTGAGGGGCGGTTTTGGTTTTCTTTA
- >LOC_Os06g13810.1 cDNA AAGCGAATTTGAAGCTCGTGGTTTCGAGATGGGGGTGTTCGCGATCTGGATAGGATCGTGGTTTTAGCTAGTTAGAGTTGGTGTTCTCCAAACAAGCTTTGGCATCGAACGCGCACAGTTCTTAGATCTTGATCGATTTTGGTTGTTTAGCGAGGGCCAGAATTAAGAGATCTGCTTATTTTTTGATTGTGAGTTGTGTCCCGGTTGCACTGAAAAATCGAATAGGCACTAATGATATATTGTGGTTCCAAATATATTTCTTGATGAATTTGCTTGCCTTGTGTCGGACCAGATTACCTGCAGGAATATGCAAAAGGATCCGTCATGTATGGATTCAAGGGAGGTCCAGCTGGAGTCATGAAGTGCAAGTACGTTGAGCTCACTGCGGATTATGTGTACCCCTACAGAAACCAGGGTGGATTTGATATGATCTGCAGTGGTAGGGACAAGATTGAAACACCAGAGCAGTTCAAGCAAGCTGAAGACACTGTAAACAAACTTGATTTGGATGGGCTTGTTGTCATTGGTGGTGATGATTCAAACACAAACGCATGCCTTCTTGCTGAGTACTTCAGGGGGAAGAACATGAAAACTCGTGTCATTGGTTGCCCAAAGACTATTGATGGAGATCTGAAATGCAAGGAGGTTCCAACAAGCTTTGGGTTTGACACTGCTTGCAAGATATACTCTGAAATGATTGGTAATGTTATGACTGATGCACGCTCAACCGGGAAGTACTACCACTTTGTGAGGCTTATGGGACGTGCTGCTTCTCACATTACATTGGAGTGTGCTCTGCAAACACATCCTAATGTTGCACTCATTGGAGAAGAGGTTGCTGCAAAGAAGGAAACTCTTAAAAGTGTCACCGACTACATTACCGACATTGTCTGCAAGCGTGCAGAACTTGGTTACAACTATGGTGTGATCCTTATCCCAGAGGGTCTGATTGATTTCATCCCAGAGGTTCAAAAACTCATTGCAGAATTGAATGAAATTTTGGCGCATGATGTTGTTGATGAGGCAGGGGCTTGGAAAAGCAAGCTTCAACCAGAATCCAGGCAACTGTTTGACTTCCTGCCCAAAACCATCCAGGAGCAACTTTTGCTTGAAAGAGATCCTCATGGAAATGTTCAGGTTGCAAAAATTGAAACAGAGAAAATGCTTATTGCCATGGTTGAGACTGAATTGGAGAAGAGAAAAGCTGAGGGGAAGTACCCCGCACATTTCAGAGGCCAATCTCACTTCTTTGGATATGAAGGAAGATGTGGCCTTCCTACTATTTTTGATTCTAACTATTGCTATGCGTTAGGCTACGGTTCTGGGGCACTTCTCCAATGTGGGAAGACAGGACTGATTACGTCGGTTGGCAACCTCGCTGCTCCTGTGGAAGAATGGACCGTTGGTGGAACTGCATTGACATCGTTGATGGATGTTGAGAGGAGGCACGGAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAACCATTACATCAGCCCTGGTCCCATCCAGTTCAGTGGCCCTGGAAGCAACGATGCGAACCACACCTTGATGTTGGAACTCGGCGCCGAGGCATAGAGAGACACGACGATACCGACGTGTACCTTTTAAATTTTTTGTTCTTACAGTTTTGAAAAGTTGAGATGGAACCTCGCAGAGTGACCTGCAGGCTCCATATTTGTGGAGTGCTCAATAAGAGGTTCCATTGGGAGTTTCTGTGGAGTAGAGATATGTGTACCAATAATAACTGATGTTAGCTTTGCATGATCCATTGCTCCATTTTTACACAGAAGTTAACTTGGTTTTATTGTAGCTCTGGGTTTTGTTCAACTGGATGCGACGCTATAATTATGGGTTTTGTTCAACTGGATGCGACGCTATAATTATGAACATAAATAATCCAGGTTGAGGGGCGGTTTTGGTTTTCTTTA
CDS Sequence
- >LOC_Os06g13810.3 CDS ATGTATGGATTCAAGGGAGGTCCAGCTGGAGTCATGAAGTGCAAGTACGTTGAGCTCACTGCGGATTATGTGTACCCCTACAGAAACCAGGGTGGATTTGATATGATCTGCAGTGGTAGGGACAAGATTGAAACACCAGAGCAGTTCAAGCAAGCTGAAGACACTGTAAACAAACTTGATTTGGATGGGCTTGTTGTCATTGGTGGTGATGATTCAAACACAAACGCATGCCTTCTTGCTGAGTACTTCAGGGGGAAGAACATGAAAACTCGTGTCATTGGTTGCCCAAAGACTATTGATGGAGATCTGAAATGCAAGGAGGTTCCAACAAGCTTTGGGTTTGACACTGCTTGCAAGATATACTCTGAAATGATTGGTAATGTTATGACTGATGCACGCTCAACCGGGAAGTACTACCACTTTGTGAGGCTTATGGGACGTGCTGCTTCTCACATTACATTGGAGTGTGCTCTGCAAACACATCCTAATGTTGCACTCATTGGAGAAGAGGTTGCTGCAAAGAAGGAAACTCTTAAAAGTGTCACCGACTACATTACCGACATTGTCTGCAAGCGTGCAGAACTTGGTTACAACTATGGTGTGATCCTTATCCCAGAGGGTCTGATTGATTTCATCCCAGAGGTTCAAAAACTCATTGCAGAATTGAATGAAATTTTGGCGCATGATGTTGTTGATGAGGCAGGGGCTTGGAAAAGCAAGCTTCAACCAGAATCCAGGCAACTGTTTGACTTCCTGCCCAAAACCATCCAGGAGCAACTTTTGCTTGAAAGAGATCCTCATGGAAATGTTCAGGTTGCAAAAATTGAAACAGAGAAAATGCTTATTGCCATGGTTGAGACTGAATTGGAGAAGAGAAAAGCTGAGGGGAAGTACCCCGCACATTTCAGAGGCCAATCTCACTTCTTTGGATATGAAGGAAGATGTGGCCTTCCTACTATTTTTGATTCTAACTATTGCTATGCGTTAGGCTACGGTTCTGGGGCACTTCTCCAATGTGGGAAGACAGGACTGATTACGTCGGTTGGCAACCTCGCTGCTCCTGTGGAAGAATGGACCGTTGGTGGAACTGCATTGACATCGTTGATGGATGTTGAGAGGAGGCACGGAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAACCATTACATCAGCCCTGGTCCCATCCAGTTCAGTGGCCCTGGAAGCAACGATGCGAACCACACCTTGATGTTGGAACTCGGCGCCGAGGCATAG
- >LOC_Os06g13810.1 CDS ATGTATGGATTCAAGGGAGGTCCAGCTGGAGTCATGAAGTGCAAGTACGTTGAGCTCACTGCGGATTATGTGTACCCCTACAGAAACCAGGGTGGATTTGATATGATCTGCAGTGGTAGGGACAAGATTGAAACACCAGAGCAGTTCAAGCAAGCTGAAGACACTGTAAACAAACTTGATTTGGATGGGCTTGTTGTCATTGGTGGTGATGATTCAAACACAAACGCATGCCTTCTTGCTGAGTACTTCAGGGGGAAGAACATGAAAACTCGTGTCATTGGTTGCCCAAAGACTATTGATGGAGATCTGAAATGCAAGGAGGTTCCAACAAGCTTTGGGTTTGACACTGCTTGCAAGATATACTCTGAAATGATTGGTAATGTTATGACTGATGCACGCTCAACCGGGAAGTACTACCACTTTGTGAGGCTTATGGGACGTGCTGCTTCTCACATTACATTGGAGTGTGCTCTGCAAACACATCCTAATGTTGCACTCATTGGAGAAGAGGTTGCTGCAAAGAAGGAAACTCTTAAAAGTGTCACCGACTACATTACCGACATTGTCTGCAAGCGTGCAGAACTTGGTTACAACTATGGTGTGATCCTTATCCCAGAGGGTCTGATTGATTTCATCCCAGAGGTTCAAAAACTCATTGCAGAATTGAATGAAATTTTGGCGCATGATGTTGTTGATGAGGCAGGGGCTTGGAAAAGCAAGCTTCAACCAGAATCCAGGCAACTGTTTGACTTCCTGCCCAAAACCATCCAGGAGCAACTTTTGCTTGAAAGAGATCCTCATGGAAATGTTCAGGTTGCAAAAATTGAAACAGAGAAAATGCTTATTGCCATGGTTGAGACTGAATTGGAGAAGAGAAAAGCTGAGGGGAAGTACCCCGCACATTTCAGAGGCCAATCTCACTTCTTTGGATATGAAGGAAGATGTGGCCTTCCTACTATTTTTGATTCTAACTATTGCTATGCGTTAGGCTACGGTTCTGGGGCACTTCTCCAATGTGGGAAGACAGGACTGATTACGTCGGTTGGCAACCTCGCTGCTCCTGTGGAAGAATGGACCGTTGGTGGAACTGCATTGACATCGTTGATGGATGTTGAGAGGAGGCACGGAAAGTACAAGCCAGTGATCAAGAAGGCTATGGTGGAACTTGACGGGGCACCGTTTAAGAAGTTTGCTTCATTGCGAGATGAGTGGTCCCTCAAGAACCATTACATCAGCCCTGGTCCCATCCAGTTCAGTGGCCCTGGAAGCAACGATGCGAACCACACCTTGATGTTGGAACTCGGCGCCGAGGCATAG
Protein Sequence
- >LOC_Os06g13810.3 protein MYGFKGGPAGVMKCKYVELTADYVYPYRNQGGFDMICSGRDKIETPEQFKQAEDTVNKLDLDGLVVIGGDDSNTNACLLAEYFRGKNMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIYSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNVALIGEEVAAKKETLKSVTDYITDIVCKRAELGYNYGVILIPEGLIDFIPEVQKLIAELNEILAHDVVDEAGAWKSKLQPESRQLFDFLPKTIQEQLLLERDPHGNVQVAKIETEKMLIAMVETELEKRKAEGKYPAHFRGQSHFFGYEGRCGLPTIFDSNYCYALGYGSGALLQCGKTGLITSVGNLAAPVEEWTVGGTALTSLMDVERRHGKYKPVIKKAMVELDGAPFKKFASLRDEWSLKNHYISPGPIQFSGPGSNDANHTLMLELGAEA*
- >LOC_Os06g13810.1 protein MYGFKGGPAGVMKCKYVELTADYVYPYRNQGGFDMICSGRDKIETPEQFKQAEDTVNKLDLDGLVVIGGDDSNTNACLLAEYFRGKNMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIYSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNVALIGEEVAAKKETLKSVTDYITDIVCKRAELGYNYGVILIPEGLIDFIPEVQKLIAELNEILAHDVVDEAGAWKSKLQPESRQLFDFLPKTIQEQLLLERDPHGNVQVAKIETEKMLIAMVETELEKRKAEGKYPAHFRGQSHFFGYEGRCGLPTIFDSNYCYALGYGSGALLQCGKTGLITSVGNLAAPVEEWTVGGTALTSLMDVERRHGKYKPVIKKAMVELDGAPFKKFASLRDEWSLKNHYISPGPIQFSGPGSNDANHTLMLELGAEA*