Gene Details:
- MSU gene ID: LOC_Os06g39650
- RAPdb gene ID: Os06g0597500
- Gene Symbol: sped1-D
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- These results suggest that sped1-D may prompt the shortening of pedicels and secondary branches by blocking the action of GID1L2, RFL, and Wox3.
Function-related keywords:
Literature:
- Regulation of inflorescence branch development in rice through a novel pathway involving the pentatricopeptide repeat protein sped1-D . DOI: 10.1534/genetics.114.163931 ; PMID: 24950892
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os06g39650.1 cDNA ATGGCAATGGCGGCGGCGAGGAGGGGCCACGGGATGCCGCTCTGGGAGTGCAACGTGCTGATCAGGACGCTGGCGAGGCGGGGGAGCTTCGCGCGCGTCATGGCGGTGTACTACGACCTCCGCGCGCGGGGACTCGTGGCGGACAGCTTCACCTACCCGTTCGTGCTCAGGGCCGTCGGGGTCCTCAAGCTGTCGGTCGAGGGGCGCAAGGCGCACGCGGCCGCTGTCAAGACCGGGTTCCGGTGGGACGCCTACACCGGGAGCTCGCTGATGGAGATGTACACGATGCTGGGGCGCGTGGACATCGCGCGGAAGGTGTTCGACGAAATGCCGAGTAGGGCGCTGGTGCTGTGGAACATGATGGTCAGGTGCTACATCAGGTGCGGGTGGTACTCGGCGGCAGTTGCTTTGTCTGAACAGATGGAGAGAAGCGGTGTCACACCTGACAGGGTGACGTTGGTGACGGCGGTGACGGCGTGCTCTAGAGCAAGGGACCTGAGCTTGGGAAGGAGGATTCATGTGTACATGGATAACGTCTTCGGTTTCAATCTGCCAGTTGCAAATGCTCTGCTGGACATGTACACGAAGAATGATTGCTTGGAAGAGGCGGTGAAATTGTTCGAGCAAATGCCTGCGAGGAACATAATTTCTTGGACCATACTTGTGTCGGGATATGGCCTTGCTGGGCAGCTGGACAAGGCCAGAGTGCTCTTCAACCAGTGCAAAGAGAAGGATCTAATTCTGTGGACTGCAATGATCAATGCGTGTGTGCAACACGGATGCTTCGAGGAGGCGCTGACATTGTTCCGAGATATGCAGATGCAACGGGTTGAGCCAGACAGGTTCACTGTTGTCACTCTCCTGACATGCTGTGCCAATCTTGGCGCTCTTGATCAAGGTGAATGGATTCACCAGTATGCTGAACAAAGGAAAATGAAGATCGATGCAGTCCTAGGCACCGCATTGATTGACATGTATTCTAAATGTGGGCACATTGAGAAGTCTCTAGAGGTCTTCTGGCGAATGCAAGGCAGAGATGCCACAGCTTGGACTGCCATCATCTGTGGGCTGGCCACAAATGGTCAGGCTGGTAGAGCTCTTGAACTGTTTCAAGATATGCAGAGAAGTAAAGTTAAGCCCGACGGTGTTACGTTTATTGGGGTGCTAAGTGCATGCTGCCATGGTGGCTTGGTTGATGAAGGCCGGAAGCAGTTCCATGCAATGAGGGAGGTTTATCAGATAGAACCAAGAGTTGAACACTATAGCTGCCTTGTGAACCTCCTAGGTCGTGCTGGTCTACTAGATGAAGCTGAGAGGTTGATCGGTGACGTTCCAATTAACAAGGATGCTATGCCACTGTTTGGTGCACTCCTCACTGCTTGCAAGGCTCATGGGAATGTTGAGATGAGTGAACGGTTAACCAAACGAATCTGTGAGCAAGATTCCCAAATTACTGATGTGAATTTGCTCATGTCTAATGTATATGCAACAGCAAGTAGATGGGAGGATGTGATAAGGGTACGGGGCAAGATGGCACACCCTACTGTCAAGAAGAATGCAGGGTGTAGCTTGATTGAGGTGAAGGGGTACTGAGGAGTTGTTGAAGCATATAATGCTTGGACAAAGGAATTGTTGAAGCATCCATTAGTTTGACTGGACCAACAGAAGCATGATCAATCACTGGAAGCCGTTTCATTAGCAATTTTGAAGAACCTTGTCTGAACAGACATTCGAGTGATCAGGCTTGTACAGTTAGTTAATTTGAGGACTACTGAACTTCAGCTAGCTTGTTTCAGGCTTGTAGCAGAGCTGGATTTTTTTTACTCTTGCCAGGAAATGGAACACGGTTCTGCAGATGAAAAAACAAGGTTAGACACCAATGCCAGTAGTATTTTTTTTTCTGTTGTTGCCTATGCCTATCAGTGCAGATGATTATATCTAATGTGCAACCATAACTTCTTAACAATGGATGGACGAACATTATCATCGCAGCATGATTCTGTCATTTGTCAGCTTGTTAAAAATGCTATACTTGGATTTTCAGTTTGCTCTTGTTGATGTATTCAGCATATCCACTCAAAACTCACTAACACATAAAACATCACTTTGAAGTGAATGCAATATTTATTTATGGAAGAAGGTTCATCTGCAAGTCACAGT
CDS Sequence
- >LOC_Os06g39650.1 CDS ATGGCAATGGCGGCGGCGAGGAGGGGCCACGGGATGCCGCTCTGGGAGTGCAACGTGCTGATCAGGACGCTGGCGAGGCGGGGGAGCTTCGCGCGCGTCATGGCGGTGTACTACGACCTCCGCGCGCGGGGACTCGTGGCGGACAGCTTCACCTACCCGTTCGTGCTCAGGGCCGTCGGGGTCCTCAAGCTGTCGGTCGAGGGGCGCAAGGCGCACGCGGCCGCTGTCAAGACCGGGTTCCGGTGGGACGCCTACACCGGGAGCTCGCTGATGGAGATGTACACGATGCTGGGGCGCGTGGACATCGCGCGGAAGGTGTTCGACGAAATGCCGAGTAGGGCGCTGGTGCTGTGGAACATGATGGTCAGGTGCTACATCAGGTGCGGGTGGTACTCGGCGGCAGTTGCTTTGTCTGAACAGATGGAGAGAAGCGGTGTCACACCTGACAGGGTGACGTTGGTGACGGCGGTGACGGCGTGCTCTAGAGCAAGGGACCTGAGCTTGGGAAGGAGGATTCATGTGTACATGGATAACGTCTTCGGTTTCAATCTGCCAGTTGCAAATGCTCTGCTGGACATGTACACGAAGAATGATTGCTTGGAAGAGGCGGTGAAATTGTTCGAGCAAATGCCTGCGAGGAACATAATTTCTTGGACCATACTTGTGTCGGGATATGGCCTTGCTGGGCAGCTGGACAAGGCCAGAGTGCTCTTCAACCAGTGCAAAGAGAAGGATCTAATTCTGTGGACTGCAATGATCAATGCGTGTGTGCAACACGGATGCTTCGAGGAGGCGCTGACATTGTTCCGAGATATGCAGATGCAACGGGTTGAGCCAGACAGGTTCACTGTTGTCACTCTCCTGACATGCTGTGCCAATCTTGGCGCTCTTGATCAAGGTGAATGGATTCACCAGTATGCTGAACAAAGGAAAATGAAGATCGATGCAGTCCTAGGCACCGCATTGATTGACATGTATTCTAAATGTGGGCACATTGAGAAGTCTCTAGAGGTCTTCTGGCGAATGCAAGGCAGAGATGCCACAGCTTGGACTGCCATCATCTGTGGGCTGGCCACAAATGGTCAGGCTGGTAGAGCTCTTGAACTGTTTCAAGATATGCAGAGAAGTAAAGTTAAGCCCGACGGTGTTACGTTTATTGGGGTGCTAAGTGCATGCTGCCATGGTGGCTTGGTTGATGAAGGCCGGAAGCAGTTCCATGCAATGAGGGAGGTTTATCAGATAGAACCAAGAGTTGAACACTATAGCTGCCTTGTGAACCTCCTAGGTCGTGCTGGTCTACTAGATGAAGCTGAGAGGTTGATCGGTGACGTTCCAATTAACAAGGATGCTATGCCACTGTTTGGTGCACTCCTCACTGCTTGCAAGGCTCATGGGAATGTTGAGATGAGTGAACGGTTAACCAAACGAATCTGTGAGCAAGATTCCCAAATTACTGATGTGAATTTGCTCATGTCTAATGTATATGCAACAGCAAGTAGATGGGAGGATGTGATAAGGGTACGGGGCAAGATGGCACACCCTACTGTCAAGAAGAATGCAGGGTGTAGCTTGATTGAGGTGAAGGGGTACTGA
Protein Sequence
- >LOC_Os06g39650.1 protein MAMAAARRGHGMPLWECNVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAVKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGWYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKNAGCSLIEVKGY*