Gene Details:
- MSU gene ID: LOC_Os06g40620
- RAPdb gene ID: Os06g0608500
- Gene Symbol: OsSNF7
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The LRD6-6 protein co-localizes with the MVBs marker protein RabF1/ARA6 and interacts with ESCRT-III components OsSNF7 and OsVPS2.
Function-related keywords:
Literature:
- The Multivesicular Bodies (MVBs)-Localized AAA ATPase LRD6-6 Inhibits Immunity and Cell Death Likely through Regulating MVBs-Mediated Vesicular Trafficking in Rice . DOI: 10.1371/journal.pgen.1006311 ; PMID: 27618555
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os06g40620.2 cDNA GAACGAAACTTCCTTGTCATGCCGGTAACGACTCCCACCACCGCATCCTCCCCGCTTTTCCCACTCCCAACCACGACCGCGGCCGGCCGGCGAATCGCCTCGATTCCGGCGTGCGAATTCCTCCACCTCGCCGCCGCCGCTGCTCGCGACCGATCTTCACCTTCCGCTTCCCCCCCCCTGCAGCCGATTGGACTCGATCCTATCCTATCCTATCCTATCCCCGAACGGGCGATCTGGTAGGCGAGAGAGACCAGCCATGTCGGGGGTGTTCGGCAAGGTGTTCGGGAAGTCCAAGGCGCAGAGCCAGGCCACCGCGCTGGCCTCCATCGACAAGCTCAGCGAGACTCTTGAAATGCTGGAAAAGAAAGAAAATTTGCTAGTGAAGAAAGCGAATCTTGAGGTTGAGAAGGCCAAGACCTTCACTAAAGCGAAGAATAAAAGAGCTGCAATACAATGCTTAAAGAGGAAGAGATTATATGAGCAACAGATTGAGCAGCTTGGTAATTTCCAATTAAGGATACATGATCAGATGATAATGCTGGAAGGTGCAAAGGCTACAACAGAGACTGTTGATGCATTGAGAACTGGAGCATCGGCGATGAAAGCAATGCACAAAGCGACAAATATTGACGACGTTGACAAGACAATGGATGAAATTAATGACAATATGGAGAATATGAGGCAGATCCAGGATCTACTATCTGCTCCTATTGGAGCTGCAGCTGATTTTGATGAAGATGAGCTGGAAGCTGAATTAGCAGATCTGGAGGGGGAGGAATTGGAGGCAGAGCTTCTAGCACCTACAACGACTGCCCCTACTGCTCCAGTGCGTGTACAGCAACCAACTCGGCCTTCTGCCCAGAGCAGCAAAACTGAAGATGACGAGTTGGCAGCTTTGCAGGCAGAGATGGCTATGTAATTAGGCTTTGATAGGGTCATGCCAAAAGATCAGATACTTCAAATACTCCTATATTGGACTCTGGTGTACTCATGAAGATCTTCCTAGGAAGATGTCAGAGACACAGAAGCAAGCTGCATGCCAGCCTAACCCGTTATGTATGGTATCATGTCATGTTACTGCCTTGTAAATCAAACAGAGCTATTTGAGCACATTATGAGCTAATAAAATGTACTACCCGTGATGGCGTCATTATGATGTGTTTCAGTCTGTACCATATCGTTTTGACGTTTTTAGTGTAGGTCAATTTATAGTTTCTCTTGATTCGAATCTGAAGTACTACATTGATGGTCGAATATAGACAGTTCTCTAAATAATGTGAATGATGATTGTATAGGGTGCTGTACATTCCTTCAGTTGTTGGTACTGTCGACCTGTAATAAATTATTAACCTAGGCTTTGTAGCTGTCTAAACAGTGATGTATATTAGTCGTGATAATTGGACACATTT
- >LOC_Os06g40620.1 cDNA GAACGAAACTTCCTTGTCATGCCGGTAACGACTCCCACCACCGCATCCTCCCCGCTTTTCCCACTCCCAACCACGACCGCGGCCGGCCGGCGAATCGCCTCGATTCCGGCGTGCGAATTCCTCCACCTCGCCGCCGCCGCTGCTCGCGACCGATCTTCACCTTCCGCTTCCCCCCCCCTGCAGCCGATTGGACTCGATCCTATCCTATCCTATCCTATCCCCGAACGGGCGATCTGGTAGGCGAGAGAGACCAGCCATGTCGGGGGTGTTCGGCAAGGTGTTCGGGAAGTCCAAGGCGCAGAGCCAGGCCACCGCGCTGGCCTCCATCGACAAGCTCAGCGAGACTCTTGAAATGCTGGAAAAGAAAGAAAATTTGCTAGTGAAGAAAGCGAATCTTGAGGTTGAGAAGGCCAAGACCTTCACTAAAGCGAAGAATAAAAGAGCTGCAATACAATGCTTAAAGAGGAAGAGATTATATGAGCAACAGATTGAGCAGCTTGGTAATTTCCAATTAAGGATACATGATCAGATGATAATGCTGGAAGGTGCAAAGGCTACAACAGAGACTGTTGATGCATTGAGAACTGGAGCATCGGCGATGAAAGCAATGCACAAAGCGACAAATATTGACGACGTTGACAAGACAATGGATGAAATTAATGACAATATGGAGAATATGAGGCAGATCCAGGATCTACTATCTGCTCCTATTGGAGCTGCAGCTGATTTTGATGAAGATGAGCTGGAAGCTGAATTAGCAGATCTGGAGGGGGAGGAATTGGAGGCAGAGCTTCTAGCACCTACAACGACTGCCCCTACTGCTCCAGTGCGTGTACAGCAACCAACTCGGCCTTCTGCCCAGAGCAGCAAAACTGAAGATGACGAGTTGGCAGCTTTGCAGGCAGAGATGGCTATGTAATTAGGCTTTGATAGGGTCATGCCAAAAGATCAGATACTTCAAATACTCCTATATTGGACTCTGGTGTACTCATGAAGATCTTCCTAGGAAGATGTCAGAGACACAGAAGCAAGCTGCATGCCAGCCTAACCCGTTATGTATGGTATCATGTCATGTTACTGCCTTGTAAATCAAACAGAGCTATTTGAGCACATTATGAGCTAATAAAATGTACTACCCGTGATGGCGTCATTATGATGTGTTTCAGTCTGTACCATATCGTTTTGACGTTTTTAGTGTAGGTCAATTTATAGTTTCTCTTGATTCGAATCTGAAGTACTACATTGATGGTCGAATATAGACAGTTCTCTAAATAATGTGAATGATGATTGTATAGGGTGCTGTACATTCCTTCAGTTGTTGGTACTGTCGACCTGTAATAAATTATTAACCTAGGCTTTGTAGCTGTCTAAACAGTGATGTATATTAGTCGTGATAATTGGACACATTT
CDS Sequence
- >LOC_Os06g40620.2 CDS ATGTCGGGGGTGTTCGGCAAGGTGTTCGGGAAGTCCAAGGCGCAGAGCCAGGCCACCGCGCTGGCCTCCATCGACAAGCTCAGCGAGACTCTTGAAATGCTGGAAAAGAAAGAAAATTTGCTAGTGAAGAAAGCGAATCTTGAGGTTGAGAAGGCCAAGACCTTCACTAAAGCGAAGAATAAAAGAGCTGCAATACAATGCTTAAAGAGGAAGAGATTATATGAGCAACAGATTGAGCAGCTTGGTAATTTCCAATTAAGGATACATGATCAGATGATAATGCTGGAAGGTGCAAAGGCTACAACAGAGACTGTTGATGCATTGAGAACTGGAGCATCGGCGATGAAAGCAATGCACAAAGCGACAAATATTGACGACGTTGACAAGACAATGGATGAAATTAATGACAATATGGAGAATATGAGGCAGATCCAGGATCTACTATCTGCTCCTATTGGAGCTGCAGCTGATTTTGATGAAGATGAGCTGGAAGCTGAATTAGCAGATCTGGAGGGGGAGGAATTGGAGGCAGAGCTTCTAGCACCTACAACGACTGCCCCTACTGCTCCAGTGCGTGTACAGCAACCAACTCGGCCTTCTGCCCAGAGCAGCAAAACTGAAGATGACGAGTTGGCAGCTTTGCAGGCAGAGATGGCTATGTAA
- >LOC_Os06g40620.1 CDS ATGTCGGGGGTGTTCGGCAAGGTGTTCGGGAAGTCCAAGGCGCAGAGCCAGGCCACCGCGCTGGCCTCCATCGACAAGCTCAGCGAGACTCTTGAAATGCTGGAAAAGAAAGAAAATTTGCTAGTGAAGAAAGCGAATCTTGAGGTTGAGAAGGCCAAGACCTTCACTAAAGCGAAGAATAAAAGAGCTGCAATACAATGCTTAAAGAGGAAGAGATTATATGAGCAACAGATTGAGCAGCTTGGTAATTTCCAATTAAGGATACATGATCAGATGATAATGCTGGAAGGTGCAAAGGCTACAACAGAGACTGTTGATGCATTGAGAACTGGAGCATCGGCGATGAAAGCAATGCACAAAGCGACAAATATTGACGACGTTGACAAGACAATGGATGAAATTAATGACAATATGGAGAATATGAGGCAGATCCAGGATCTACTATCTGCTCCTATTGGAGCTGCAGCTGATTTTGATGAAGATGAGCTGGAAGCTGAATTAGCAGATCTGGAGGGGGAGGAATTGGAGGCAGAGCTTCTAGCACCTACAACGACTGCCCCTACTGCTCCAGTGCGTGTACAGCAACCAACTCGGCCTTCTGCCCAGAGCAGCAAAACTGAAGATGACGAGTTGGCAGCTTTGCAGGCAGAGATGGCTATGTAA
Protein Sequence
- >LOC_Os06g40620.2 protein MSGVFGKVFGKSKAQSQATALASIDKLSETLEMLEKKENLLVKKANLEVEKAKTFTKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKATNIDDVDKTMDEINDNMENMRQIQDLLSAPIGAAADFDEDELEAELADLEGEELEAELLAPTTTAPTAPVRVQQPTRPSAQSSKTEDDELAALQAEMAM*
- >LOC_Os06g40620.1 protein MSGVFGKVFGKSKAQSQATALASIDKLSETLEMLEKKENLLVKKANLEVEKAKTFTKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKATNIDDVDKTMDEINDNMENMRQIQDLLSAPIGAAADFDEDELEAELADLEGEELEAELLAPTTTAPTAPVRVQQPTRPSAQSSKTEDDELAALQAEMAM*