Gene Details:
- MSU gene ID: LOC_Os06g44060
- RAPdb gene ID: Os06g0649900
- Gene Symbol: spPLD
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Interestingly, rice Hd3a and RFT1 bind to phosphatidylcholines (PCs) and a further analysis by lipidomic approach using mass spectrometry revealed the altered phospholipids profiles in shoot apical meristem, particularly the PC species, under altered spPLD expressions.
Function-related keywords:
Literature:
- A secretory phospholipase D hydrolyzes phosphatidylcholine to suppress rice heading time . DOI: 10.1371/journal.pgen.1009905 ; PMID: 34879072
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os06g44060.2 cDNA CCATGGAGATCATTGTGGTTTTCCCGCGAAATCCTTCTTCTCGTCGGGCGATTCGCCGCTAATATCAACTCTATCCTTCTCCAAATTTTTCTTTTTTTTTCCCAGTGGTGGTGTTACACTGACAGCTCGCTCGCCAGTTGACGCTTCCACGGAAGGCGCAGCAGAGTAGCCGGCTAAGCCGCCGCCGCCATGCGTTCCTCCGCCCGCGGCCGCGGCCGCCTCCTGCTGCTCCTCCTCCTCGCCGCCGGTGCGCCGGCGGCGCCGGCGGCGGCGGAGGTGGCCACCTGCAAGGCGTGGCTGGTGCAGTCCATCCCCACCGACATGCCCCACCTGCGGCGCGTCCCCGGTGTCCTCTCCACTGCGGATGTGCTGCAATGGCTATCTGGGAATGCTACAAAAAGCCTGGATGTCCTTGCTCAATACTGGCAGTTCTTAGCTCAACCTAAGAACCCTAAATCAGGCGATTATGGGTACTCTGAGAGTGAAATGGTAAGGTTCGGAGCTGACAAGGGGCAACGGGTTTATAAGGCACTGGAGAAAGCTGCAGATCGTAAGATCAAAATCAGGATTGTGCAACACTCTGGATTTGCGCCTGATTTTGACAAAGAGAGTGCTGATCTCGCTGCAGGAAGACCAAATGTACAAAATGTAACCTTACTTTTTGGTGATTGGTGGGGCTCTGGTGTTGTGCATGCAAAAGTGTGGATATCTGACAAAAAGGATGTGTATATTGGATCTGCAAACAACGATTGGAAATCCCTTAGTCAGGTGAAAGAGCTTGGGATTTATTTTGCTGATTGTCCACAGATAGCAAAAACTGTGGAAATATACTTTCAAAATCTTTGGAAACTTTCAACTCTCAACTCAACTGCTTACACCAAAGTTGCCTGGGACAAGCAATGGCAAGCTTTTAGAAAAGTGCCATGCTGGTCACATTTTCTAAAACCAGAAGAAAGATGCAGGTCACCTCTTCCACCCTCTGTTGATGTCCCATATGTGGATGGCTATCCGTCACTTGCCAATCCTAAAATGCTTGATTTTTCATTTGAAACCCCTGGGTATAAGAGCTCTACTAAGGAACACCACTTGAGCTATCTTTCATATGCTCCTCCTGAGCTTTCATTTGACAAGTTCCAGGCAGATGAGCAGGGTTGGCTTGACACCATCAAGTCTGTCAAATTCGGGGGAGTGGTGCGGATAAGTACTATGGACTGGCTGGGACAGTCGCAATATGCAACTCAAACAGTGTTCTGGCCATCCTTGTCATCAGCAATATCAGAGGTAATATTCTCAAAGAATGCAACTGTAAGGATCCTCGTAGCCTACTGGACGCACTTCATCCCGAACACCGAAAAGTACTTGAAGAGCCTTCTATACTCAAACATCCTCTGCACATCTTCCAGCTACAACCACTGCATGGGCAAGGTTGAGATCAAATACTATGTGGTTCCTGGGTACAACAAGACCGGACCTGCATTGGCGCAAGGCGCTGCGACGGGGAATCGCTACCCTGATTTCACCCGGGTGAACCATGGCAAGTACGCCGTCAGCGATGTGAGGGCGAACATCGGCACCAGCAACCTCATCTGGGATTACTTCTACACCACAGCCGGTGTCAGCTTCGGAACATACAGCCCCGCCATTGTTTCGCAGCTGCAGGATATCTTTGATGCAGATTGGTTTTCTCCATACACTGTACCTGTAAAACCACTGGAAGCATCTGCATAATATCAGGACAGAAACGCCATTCAACAGGAGATCACATGCATCAACAACATTAGGAGTTTCACTGCTCGTTTTTGTCAAGAATCTGCAGATATTTTTTTTTCGTTTCTCCAATAAGTTAGTTTACAGAAATTTTACTTCCCAGATGAGAAGTGTAAACTTTCAGAAAACATTGTACAAGTGTAAATTTTACTACCTCTTGAGCATTGCCTCATCTAATCAATTTGAGAGCATCGAGTTTATTCAGA
- >LOC_Os06g44060.1 cDNA CCATGGAGATCATTGTGGTTTTCCCGCGAAATCCTTCTTCTCGTCGGGCGATTCGCCGCTAATATCAACTCTATCCTTCTCCAAATTTTTCTTTTTTTTTCCCAGTGGTGGTGTTACACTGACAGCTCGCTCGCCAGTTGACGCTTCCACGGAAGGCGCAGCAGAGTAGCCGGCTAAGCCGCCGCCGCCATGCGTTCCTCCGCCCGCGGCCGCGGCCGCCTCCTGCTGCTCCTCCTCCTCGCCGCCGGTGCGCCGGCGGCGCCGGCGGCGGCGGAGGTGGCCACCTGCAAGGCGTGGCTGGTGCAGTCCATCCCCACCGACATGCCCCACCTGCGGCGCGTCCCCGGTGTCCTCTCCACTGCGGATGTGCTGCAATGGCTATCTGGGAATGCTACAAAAAGCCTGGATGTCCTTGCTCAATACTGGCAGTTCTTAGCTCAACCTAAGAACCCTAAATCAGGCGATTATGGGTACTCTGAGAGTGAAATGGTAAGGTTCGGAGCTGACAAGGGGCAACGGGTTTATAAGGCACTGGAGAAAGCTGCAGATCGTAAGATCAAAATCAGGATTGTGCAACACTCTGGATTTGCGCCTGATTTTGACAAAGAGAGTGCTGATCTCGCTGCAGGAAGACCAAATGTACAAAATGTAACCTTACTTTTTGGTGATTGGTGGGGCTCTGGTGTTGTGCATGCAAAAGTGTGGATATCTGACAAAAAGGATGTGTATATTGGATCTGCAAACAACGATTGGAAATCCCTTAGTCAGGTGAAAGAGCTTGGGATTTATTTTGCTGATTGTCCACAGATAGCAAAAACTGTGGAAATATACTTTCAAAATCTTTGGAAACTTTCAACTCTCAACTCAACTGCTTACACCAAAGTTGCCTGGGACAAGCAATGGCAAGCTTTTAGAAAAGTGCCATGCTGGTCACATTTTCTAAAACCAGAAGAAAGATGCAGGTCACCTCTTCCACCCTCTGTTGATGTCCCATATGTGGATGGCTATCCGTCACTTGCCAATCCTAAAATGCTTGATTTTTCATTTGAAACCCCTGGGTATAAGAGCTCTACTAAGGAACACCACTTGAGCTATCTTTCATATGCTCCTCCTGAGCTTTCATTTGACAAGTTCCAGGCAGATGAGCAGGGTTGGCTTGACACCATCAAGTCTGTCAAATTCGGGGGAGTGGTGCGGATAAGTACTATGGACTGGCTGGGACAGTCGCAATATGCAACTCAAACAGTGTTCTGGCCATCCTTGTCATCAGCAATATCAGAGGTAATATTCTCAAAGAATGCAACTGTAAGGATCCTCGTAGCCTACTGGACGCACTTCATCCCGAACACCGAAAAGTACTTGAAGAGCCTTCTATACTCAAACATCCTCTGCACATCTTCCAGCTACAACCACTGCATGGGCAAGGTTGAGATCAAATACTATGTGGTTCCTGGGTACAACAAGACCGGACCTGCATTGGCGCAAGGCGCTGCGACGGGGAATCGCTACCCTGATTTCACCCGGGTGAACCATGGCAAGTACGCCGTCAGCGATGTGAGGGCGAACATCGGCACCAGCAACCTCATCTGGGATTACTTCTACACCACAGCCGGTGTCAGCTTCGGAACATACAGCCCCGCCATTGTTTCGCAGCTGCAGGATATCTTTGATGCAGATTGGTTTTCTCCATACACTGTACCTGTAAAACCACTGGAAGCATCTGCATAATATCAGGACAGAAACGCCATTCAACAGGAGATCACATGCATCAACAACATTAGGAGTTTCACTGCTCGTTTTTGTCAAGAATCTGCAGATATTTTTTTTTCGTTTCTCCAATAAGTTAGTTTACAGAAATTTTACTTCCCAGATGAGAAGTGTAAACTTTCAGAAAACATTGTACAAGTGTAAATTTTACTACCTCTTGAGCATTGCCTCATCTAATCAATTTGAGAGCATCGAGTTTATTCAGA
CDS Sequence
- >LOC_Os06g44060.2 CDS ATGCGTTCCTCCGCCCGCGGCCGCGGCCGCCTCCTGCTGCTCCTCCTCCTCGCCGCCGGTGCGCCGGCGGCGCCGGCGGCGGCGGAGGTGGCCACCTGCAAGGCGTGGCTGGTGCAGTCCATCCCCACCGACATGCCCCACCTGCGGCGCGTCCCCGGTGTCCTCTCCACTGCGGATGTGCTGCAATGGCTATCTGGGAATGCTACAAAAAGCCTGGATGTCCTTGCTCAATACTGGCAGTTCTTAGCTCAACCTAAGAACCCTAAATCAGGCGATTATGGGTACTCTGAGAGTGAAATGGTAAGGTTCGGAGCTGACAAGGGGCAACGGGTTTATAAGGCACTGGAGAAAGCTGCAGATCGTAAGATCAAAATCAGGATTGTGCAACACTCTGGATTTGCGCCTGATTTTGACAAAGAGAGTGCTGATCTCGCTGCAGGAAGACCAAATGTACAAAATGTAACCTTACTTTTTGGTGATTGGTGGGGCTCTGGTGTTGTGCATGCAAAAGTGTGGATATCTGACAAAAAGGATGTGTATATTGGATCTGCAAACAACGATTGGAAATCCCTTAGTCAGGTGAAAGAGCTTGGGATTTATTTTGCTGATTGTCCACAGATAGCAAAAACTGTGGAAATATACTTTCAAAATCTTTGGAAACTTTCAACTCTCAACTCAACTGCTTACACCAAAGTTGCCTGGGACAAGCAATGGCAAGCTTTTAGAAAAGTGCCATGCTGGTCACATTTTCTAAAACCAGAAGAAAGATGCAGGTCACCTCTTCCACCCTCTGTTGATGTCCCATATGTGGATGGCTATCCGTCACTTGCCAATCCTAAAATGCTTGATTTTTCATTTGAAACCCCTGGGTATAAGAGCTCTACTAAGGAACACCACTTGAGCTATCTTTCATATGCTCCTCCTGAGCTTTCATTTGACAAGTTCCAGGCAGATGAGCAGGGTTGGCTTGACACCATCAAGTCTGTCAAATTCGGGGGAGTGGTGCGGATAAGTACTATGGACTGGCTGGGACAGTCGCAATATGCAACTCAAACAGTGTTCTGGCCATCCTTGTCATCAGCAATATCAGAGGTAATATTCTCAAAGAATGCAACTGTAAGGATCCTCGTAGCCTACTGGACGCACTTCATCCCGAACACCGAAAAGTACTTGAAGAGCCTTCTATACTCAAACATCCTCTGCACATCTTCCAGCTACAACCACTGCATGGGCAAGGTTGAGATCAAATACTATGTGGTTCCTGGGTACAACAAGACCGGACCTGCATTGGCGCAAGGCGCTGCGACGGGGAATCGCTACCCTGATTTCACCCGGGTGAACCATGGCAAGTACGCCGTCAGCGATGTGAGGGCGAACATCGGCACCAGCAACCTCATCTGGGATTACTTCTACACCACAGCCGGTGTCAGCTTCGGAACATACAGCCCCGCCATTGTTTCGCAGCTGCAGGATATCTTTGATGCAGATTGGTTTTCTCCATACACTGTACCTGTAAAACCACTGGAAGCATCTGCATAA
- >LOC_Os06g44060.1 CDS ATGCGTTCCTCCGCCCGCGGCCGCGGCCGCCTCCTGCTGCTCCTCCTCCTCGCCGCCGGTGCGCCGGCGGCGCCGGCGGCGGCGGAGGTGGCCACCTGCAAGGCGTGGCTGGTGCAGTCCATCCCCACCGACATGCCCCACCTGCGGCGCGTCCCCGGTGTCCTCTCCACTGCGGATGTGCTGCAATGGCTATCTGGGAATGCTACAAAAAGCCTGGATGTCCTTGCTCAATACTGGCAGTTCTTAGCTCAACCTAAGAACCCTAAATCAGGCGATTATGGGTACTCTGAGAGTGAAATGGTAAGGTTCGGAGCTGACAAGGGGCAACGGGTTTATAAGGCACTGGAGAAAGCTGCAGATCGTAAGATCAAAATCAGGATTGTGCAACACTCTGGATTTGCGCCTGATTTTGACAAAGAGAGTGCTGATCTCGCTGCAGGAAGACCAAATGTACAAAATGTAACCTTACTTTTTGGTGATTGGTGGGGCTCTGGTGTTGTGCATGCAAAAGTGTGGATATCTGACAAAAAGGATGTGTATATTGGATCTGCAAACAACGATTGGAAATCCCTTAGTCAGGTGAAAGAGCTTGGGATTTATTTTGCTGATTGTCCACAGATAGCAAAAACTGTGGAAATATACTTTCAAAATCTTTGGAAACTTTCAACTCTCAACTCAACTGCTTACACCAAAGTTGCCTGGGACAAGCAATGGCAAGCTTTTAGAAAAGTGCCATGCTGGTCACATTTTCTAAAACCAGAAGAAAGATGCAGGTCACCTCTTCCACCCTCTGTTGATGTCCCATATGTGGATGGCTATCCGTCACTTGCCAATCCTAAAATGCTTGATTTTTCATTTGAAACCCCTGGGTATAAGAGCTCTACTAAGGAACACCACTTGAGCTATCTTTCATATGCTCCTCCTGAGCTTTCATTTGACAAGTTCCAGGCAGATGAGCAGGGTTGGCTTGACACCATCAAGTCTGTCAAATTCGGGGGAGTGGTGCGGATAAGTACTATGGACTGGCTGGGACAGTCGCAATATGCAACTCAAACAGTGTTCTGGCCATCCTTGTCATCAGCAATATCAGAGGTAATATTCTCAAAGAATGCAACTGTAAGGATCCTCGTAGCCTACTGGACGCACTTCATCCCGAACACCGAAAAGTACTTGAAGAGCCTTCTATACTCAAACATCCTCTGCACATCTTCCAGCTACAACCACTGCATGGGCAAGGTTGAGATCAAATACTATGTGGTTCCTGGGTACAACAAGACCGGACCTGCATTGGCGCAAGGCGCTGCGACGGGGAATCGCTACCCTGATTTCACCCGGGTGAACCATGGCAAGTACGCCGTCAGCGATGTGAGGGCGAACATCGGCACCAGCAACCTCATCTGGGATTACTTCTACACCACAGCCGGTGTCAGCTTCGGAACATACAGCCCCGCCATTGTTTCGCAGCTGCAGGATATCTTTGATGCAGATTGGTTTTCTCCATACACTGTACCTGTAAAACCACTGGAAGCATCTGCATAA
Protein Sequence
- >LOC_Os06g44060.2 protein MRSSARGRGRLLLLLLLAAGAPAAPAAAEVATCKAWLVQSIPTDMPHLRRVPGVLSTADVLQWLSGNATKSLDVLAQYWQFLAQPKNPKSGDYGYSESEMVRFGADKGQRVYKALEKAADRKIKIRIVQHSGFAPDFDKESADLAAGRPNVQNVTLLFGDWWGSGVVHAKVWISDKKDVYIGSANNDWKSLSQVKELGIYFADCPQIAKTVEIYFQNLWKLSTLNSTAYTKVAWDKQWQAFRKVPCWSHFLKPEERCRSPLPPSVDVPYVDGYPSLANPKMLDFSFETPGYKSSTKEHHLSYLSYAPPELSFDKFQADEQGWLDTIKSVKFGGVVRISTMDWLGQSQYATQTVFWPSLSSAISEVIFSKNATVRILVAYWTHFIPNTEKYLKSLLYSNILCTSSSYNHCMGKVEIKYYVVPGYNKTGPALAQGAATGNRYPDFTRVNHGKYAVSDVRANIGTSNLIWDYFYTTAGVSFGTYSPAIVSQLQDIFDADWFSPYTVPVKPLEASA*
- >LOC_Os06g44060.1 protein MRSSARGRGRLLLLLLLAAGAPAAPAAAEVATCKAWLVQSIPTDMPHLRRVPGVLSTADVLQWLSGNATKSLDVLAQYWQFLAQPKNPKSGDYGYSESEMVRFGADKGQRVYKALEKAADRKIKIRIVQHSGFAPDFDKESADLAAGRPNVQNVTLLFGDWWGSGVVHAKVWISDKKDVYIGSANNDWKSLSQVKELGIYFADCPQIAKTVEIYFQNLWKLSTLNSTAYTKVAWDKQWQAFRKVPCWSHFLKPEERCRSPLPPSVDVPYVDGYPSLANPKMLDFSFETPGYKSSTKEHHLSYLSYAPPELSFDKFQADEQGWLDTIKSVKFGGVVRISTMDWLGQSQYATQTVFWPSLSSAISEVIFSKNATVRILVAYWTHFIPNTEKYLKSLLYSNILCTSSSYNHCMGKVEIKYYVVPGYNKTGPALAQGAATGNRYPDFTRVNHGKYAVSDVRANIGTSNLIWDYFYTTAGVSFGTYSPAIVSQLQDIFDADWFSPYTVPVKPLEASA*