Gene Details:
- MSU gene ID: LOC_Os06g44620
- RAPdb gene ID: Os06g0656500
- Gene Symbol: Os4CL4
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Further, the loss-of-function of Os4CL3 and Os4CL4 notably reduced cell-wall-bound ferulates, indicating their roles in cell wall feruloylation.
- A series of chemical and nuclear magnetic resonance analyses revealed that loss-of-function of Os4CL3 and Os4CL4 differently altered the composition of lignin polymer units.
Function-related keywords:
Literature:
- Functional characterization of evolutionarily divergent 4-coumarate:coenzyme a ligases in rice . DOI: 10.1104/pp.111.178301 ; PMID: 21807887
- Genome-edited rice deficient in two 4-COUMARATE:COENZYME A LIGASE genes displays diverse lignin alterations . DOI: 10.1093/plphys/kiac450 ; PMID: 36149320
Related News:
Gene Resources:
- NCBI ID: NM_001064787
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os06g44620.1 cDNA TATTAACAAACGCTTCGCCTGCCCCCAATTCCTCTCTCTTCCTCTCATCAGTCAAGAGCGGAAGAGCTCGACACATCTCTCCGATCCCCATTTCGCCTTCTGCTCCGGTGAGCTCCGATCTGACTGCGCGTGGGGGGAATCGATGGGGTCCATGGCGGCGGCGGCGGAGGCGGCGCAGGAGGAGGAGACGGTGGTGTTCCGGTCCAAGCTCCCCGACATCGAGATCCCCAGCCACCTCACCCTGCAGGCCTACTGCTTCGAGAAGCTTCCGGAGGTGGCCGCCCGCCCCTGCCTCATCGACGGGCAGACCGGGGCGGTGTACAGCTACGGCGAGGTGGAGGAGCTCTCCCGGCGCGCGGCGGCGGGGCTGCGGCGGCTCGGGGTGGGGAAGGGCGACGTGGTGATGAGCCTCCTCCGCAACTGCCCCGAGTTCGCCTTCACCTTCCTCGGCGCCGCCAGGCTGGGCGCGGCCACCACCACCGCCAACCCGTTCTACACCCCGCACGAGATCCACCGCCAGGCGTCGGCGGCGGGCGCCAGGGTGATCGTGACCGAGGCGTGCGCGGTGGAGAAGGTGCGCGGGTTCGCCGCCGACCGCGGCATCCCCGTGGTCGCCGTCGACGGGGACTTCGACGGCTGCGTCGGGTTCGGGGAGGCGATGCTGGACGCGTCCATCGAGCCGCTCGACGCCGACGAGGAGGTCCACCCCGACGACGTCGTCGCCCTCCCTTACTCCTCCGGCACCACCGGCTTGCCCAAGGGCGTCATGCTCACCCACCGCAGCCTCGTCACCAGCGTCGCGCAGCAGGTGGACGGGGAGAACCCGAACCTGTACTTCAGGAGGGAGGACGTGGTGCTGTGCTTGCTGCCGCTGTTCCACATCTACTCGCTCAACTCCGTGCTGCTGGCGGGGCTGCGAGCCGGGTCGGCGATCGTGATCATGCGCAAGTTCGACCTGGGCGCGCTGGTGGACCTGACGCGGAGGCACGGCGTCACCGTCGCGCCGTTCGTGCCGCCCATCGTGGTGGAGATCGCCAAGAGCCCCCGCGTCACCGCCGACGACCTCGCCTCCATCCGCATGGTTATGTCCGGCGCCGCCCCCATGGGGAAGGACCTCCAGGACGCCTTCATGGCCAAGATCCCCAACGCCGTCCTGGGACAGGGGTATGGGATGACTGAGGCTGGACCTGTGCTGGCCATGTGTCTGGCCTTCGCAAAGGAGCCATTCGAGGTCAAGTCCGGCTCGTGCGGGACAGTCGTCAGAAACGCGGAGCTGAAGATCGTTGACCCTGACACCGGCGCCACCCTTGGCCGGAACCAGTCCGGGGAGATTTGCATCCGGGGAGAACAAATCATGAAAGGTTATCTGAATGACCCGGAGTCCACGAAGAACACCATCGACAAGGGCGGTTGGCTGCACACAGGAGACATTGGTTATGTTGACGACGACGACGAGATTTTCATTGTTGACCGGCTCAAGGAAATAATAAAATACAAGGGGTTCCAAGTACCTCCTGCGGAACTTGAAGCTCTTCTCATCACACACCCTGATATCAAGGATGCTGCCGTTGTACCGATGATAGACGAAATTGCGGGTGAAGTGCCGGTTGCATTCATTGTACGGATTGAAGGATCTGCAATCAGCGAGAATGAGATCAAGCAATTTGTGGCAAAGGAGGTTGTTTTCTACAAGAGGCTCAACAAAGTTTTCTTCGCGGATTCAATTCCGAAGAGTCCTTCTGGCAAGATTCTCAGGAAGGACCTCAGAGCAAAGCTTGCAGCCGGCATCCCTACCAATGATAATACACAGTTGAAAAGCTAAATCTGATAATATTTTTTCCTCTTTATACACCAGTTTCAAAAATCATGTAATATTCTTTATGAAATGGCAGAAATACGTATAGAAGGGCCATATGGTTCAATTCTTTTAGATGGCTAAGTTATACTTTGTTTGTATGCCCGTTATGTGTACCGTGTCATGTATAGATACCTTTTTTTTTTCTTTTTGAATTTTGACAACAAGGCTGATTATAATGTATACCACGTTTCAATTAAAATATTCTCTTCATTTGTAATTCAAATTGCACGTGTTCTTACTGCTTACTGGAACCTGGACATTATGTGAGAACTAAAATGTTCTGACTTATGACAG
- >LOC_Os06g44620.2 cDNA TATTAACAAACGCTTCGCCTGCCCCCAATTCCTCTCTCTTCCTCTCATCAGTCAAGAGCGGAAGAGCTCGACACATCTCTCCGATCCCCATTTCGCCTTCTGCTCCGGTGAGCTCCGATCTGACTGCGCGTGGGGGGAATCGATGGGGTCCATGGCGGCGGCGGCGGAGGCGGCGCAGGAGGAGGAGACGGTGGTGTTCCGGTCCAAGCTCCCCGACATCGAGATCCCCAGCCACCTCACCCTGCAGGCCTACTGCTTCGAGAAGCTTCCGGAGGTGGCCGCCCGCCCCTGCCTCATCGACGGGCAGACCGGGGCGGTGTACAGCTACGGCGAGGTGGAGGAGCTCTCCCGGCGCGCGGCGGCGGGGCTGCGGCGGCTCGGGGTGGGGAAGGGCGACGTGGTGATGAGCCTCCTCCGCAACTGCCCCGAGTTCGCCTTCACCTTCCTCGGCGCCGCCAGGCTGGGCGCGGCCACCACCACCGCCAACCCGTTCTACACCCCGCACGAGATCCACCGCCAGGCGTCGGCGGCGGGCGCCAGGGTGATCGTGACCGAGGCGTGCGCGGTGGAGAAGGTGCGCGGGTTCGCCGCCGACCGCGGCATCCCCGTGGTCGCCGTCGACGGGGACTTCGACGGCTGCGTCGGGTTCGGGGAGGCGATGCTGGACGCGTCCATCGAGCCGCTCGACGCCGACGAGGAGGTCCACCCCGACGACGTCGTCGCCCTCCCTTACTCCTCCGGCACCACCGGCTTGCCCAAGGGCGTCATGCTCACCCACCGCAGCCTCGTCACCAGCGTCGCGCAGCAGGTGGACGGGGAGAACCCGAACCTGTACTTCAGGAGGGAGGACGTGGTGCTGTGCTTGCTGCCGCTGTTCCACATCTACTCGCTCAACTCCGTGCTGCTGGCGGGGCTGCGAGCCGGGTCGGCGATCGTGATCATGCGCAAGTTCGACCTGGGCGCGCTGGTGGACCTGACGCGGAGGCACGGCGTCACCGTCGCGCCGTTCGTGCCGCCCATCGTGGTGGAGATCGCCAAGAGCCCCCGCGTCACCGCCGACGACCTCGCCTCCATCCGCATGGTTATGTCCGGCGCCGCCCCCATGGGGAAGGACCTCCAGGACGCCTTCATGGCCAAGATCCCCAACGCCGTCCTGGGACAGGGGTATGGGATGACTGAGGCTGGACCTGTGCTGGCCATGTGTCTGGCCTTCGCAAAGGAGCCATTCGAGGTCAAGTCCGGCTCGTGCGGGACAGTCGTCAGAAACGCGGAGCTGAAGATCGTTGACCCTGACACCGGCGCCACCCTTGGCCGGAACCAGTCCGGGGAGATTTGCATCCGGGGAGAACAAATCATGAAAGGTTATCTGAATGACCCGGAGTCCACGAAGAACACCATCGACAAGGGCGGTTGGCTGCACACAGGAGACATTGGTTATGTTGACGACGACGACGAGATTTTCATTGTTGACCGGCTCAAGGAAATAATAAAATACAAGGGGTTCCAAGTACCTCCTGCGGAACTTGAAGCTCTTCTCATCACACACCCTGATATCAAGGATGCTGCCGTTGTACCGATGATAGACGAAATTGCGGGTGAAGTGCCGGTTGCATTCATTGTACGGATTGAAGGATCTGCAATCAGCGAGAATGAGATCAAGCAATTTGTGGCAAAGGAGGTTGTTTTCTACAAGAGGCTCAACAAAGTTTTCTTCGCGGATTCAATTCCGAAGAGTCCTTCTGGCAAGATTCTCAGGAAGGACCTCAGAGCAAAGCTTGCAGCCGGCATCCCTACCAATGATAATACACAGTTGAAAAGCTAAATCTGATAATATTTTTTCCTCTTTATACACCAGTTTCAAAAATCATGTAATATTCTTTATGAAATGGCAGAAATACGTATAGAAGGGCCATATGGTTCAATTCTTTTAGATGGCTAAGTTATACTTTGTTTGTATGCCCGTTATGTGTACCGTGTCATGTATAGATACCTTTTTTTTTTCTTTTTGAATTTTGACAACAAGGCTGATTATAATGTATACCACGTTTCAATTAAAATATTCTCTTCATTTGTAATTCAAATTGCACGTGTTCTTACTGCTTACTGGAACCTGGACATTATGTGAGAACTAAAATGTTCTGACTTATGACAG
CDS Sequence
- >LOC_Os06g44620.1 CDS ATGGGGTCCATGGCGGCGGCGGCGGAGGCGGCGCAGGAGGAGGAGACGGTGGTGTTCCGGTCCAAGCTCCCCGACATCGAGATCCCCAGCCACCTCACCCTGCAGGCCTACTGCTTCGAGAAGCTTCCGGAGGTGGCCGCCCGCCCCTGCCTCATCGACGGGCAGACCGGGGCGGTGTACAGCTACGGCGAGGTGGAGGAGCTCTCCCGGCGCGCGGCGGCGGGGCTGCGGCGGCTCGGGGTGGGGAAGGGCGACGTGGTGATGAGCCTCCTCCGCAACTGCCCCGAGTTCGCCTTCACCTTCCTCGGCGCCGCCAGGCTGGGCGCGGCCACCACCACCGCCAACCCGTTCTACACCCCGCACGAGATCCACCGCCAGGCGTCGGCGGCGGGCGCCAGGGTGATCGTGACCGAGGCGTGCGCGGTGGAGAAGGTGCGCGGGTTCGCCGCCGACCGCGGCATCCCCGTGGTCGCCGTCGACGGGGACTTCGACGGCTGCGTCGGGTTCGGGGAGGCGATGCTGGACGCGTCCATCGAGCCGCTCGACGCCGACGAGGAGGTCCACCCCGACGACGTCGTCGCCCTCCCTTACTCCTCCGGCACCACCGGCTTGCCCAAGGGCGTCATGCTCACCCACCGCAGCCTCGTCACCAGCGTCGCGCAGCAGGTGGACGGGGAGAACCCGAACCTGTACTTCAGGAGGGAGGACGTGGTGCTGTGCTTGCTGCCGCTGTTCCACATCTACTCGCTCAACTCCGTGCTGCTGGCGGGGCTGCGAGCCGGGTCGGCGATCGTGATCATGCGCAAGTTCGACCTGGGCGCGCTGGTGGACCTGACGCGGAGGCACGGCGTCACCGTCGCGCCGTTCGTGCCGCCCATCGTGGTGGAGATCGCCAAGAGCCCCCGCGTCACCGCCGACGACCTCGCCTCCATCCGCATGGTTATGTCCGGCGCCGCCCCCATGGGGAAGGACCTCCAGGACGCCTTCATGGCCAAGATCCCCAACGCCGTCCTGGGACAGGGGTATGGGATGACTGAGGCTGGACCTGTGCTGGCCATGTGTCTGGCCTTCGCAAAGGAGCCATTCGAGGTCAAGTCCGGCTCGTGCGGGACAGTCGTCAGAAACGCGGAGCTGAAGATCGTTGACCCTGACACCGGCGCCACCCTTGGCCGGAACCAGTCCGGGGAGATTTGCATCCGGGGAGAACAAATCATGAAAGGTTATCTGAATGACCCGGAGTCCACGAAGAACACCATCGACAAGGGCGGTTGGCTGCACACAGGAGACATTGGTTATGTTGACGACGACGACGAGATTTTCATTGTTGACCGGCTCAAGGAAATAATAAAATACAAGGGGTTCCAAGTACCTCCTGCGGAACTTGAAGCTCTTCTCATCACACACCCTGATATCAAGGATGCTGCCGTTGTACCGATGATAGACGAAATTGCGGGTGAAGTGCCGGTTGCATTCATTGTACGGATTGAAGGATCTGCAATCAGCGAGAATGAGATCAAGCAATTTGTGGCAAAGGAGGTTGTTTTCTACAAGAGGCTCAACAAAGTTTTCTTCGCGGATTCAATTCCGAAGAGTCCTTCTGGCAAGATTCTCAGGAAGGACCTCAGAGCAAAGCTTGCAGCCGGCATCCCTACCAATGATAATACACAGTTGAAAAGCTAA
- >LOC_Os06g44620.2 CDS ATGGGGTCCATGGCGGCGGCGGCGGAGGCGGCGCAGGAGGAGGAGACGGTGGTGTTCCGGTCCAAGCTCCCCGACATCGAGATCCCCAGCCACCTCACCCTGCAGGCCTACTGCTTCGAGAAGCTTCCGGAGGTGGCCGCCCGCCCCTGCCTCATCGACGGGCAGACCGGGGCGGTGTACAGCTACGGCGAGGTGGAGGAGCTCTCCCGGCGCGCGGCGGCGGGGCTGCGGCGGCTCGGGGTGGGGAAGGGCGACGTGGTGATGAGCCTCCTCCGCAACTGCCCCGAGTTCGCCTTCACCTTCCTCGGCGCCGCCAGGCTGGGCGCGGCCACCACCACCGCCAACCCGTTCTACACCCCGCACGAGATCCACCGCCAGGCGTCGGCGGCGGGCGCCAGGGTGATCGTGACCGAGGCGTGCGCGGTGGAGAAGGTGCGCGGGTTCGCCGCCGACCGCGGCATCCCCGTGGTCGCCGTCGACGGGGACTTCGACGGCTGCGTCGGGTTCGGGGAGGCGATGCTGGACGCGTCCATCGAGCCGCTCGACGCCGACGAGGAGGTCCACCCCGACGACGTCGTCGCCCTCCCTTACTCCTCCGGCACCACCGGCTTGCCCAAGGGCGTCATGCTCACCCACCGCAGCCTCGTCACCAGCGTCGCGCAGCAGGTGGACGGGGAGAACCCGAACCTGTACTTCAGGAGGGAGGACGTGGTGCTGTGCTTGCTGCCGCTGTTCCACATCTACTCGCTCAACTCCGTGCTGCTGGCGGGGCTGCGAGCCGGGTCGGCGATCGTGATCATGCGCAAGTTCGACCTGGGCGCGCTGGTGGACCTGACGCGGAGGCACGGCGTCACCGTCGCGCCGTTCGTGCCGCCCATCGTGGTGGAGATCGCCAAGAGCCCCCGCGTCACCGCCGACGACCTCGCCTCCATCCGCATGGTTATGTCCGGCGCCGCCCCCATGGGGAAGGACCTCCAGGACGCCTTCATGGCCAAGATCCCCAACGCCGTCCTGGGACAGGGGTATGGGATGACTGAGGCTGGACCTGTGCTGGCCATGTGTCTGGCCTTCGCAAAGGAGCCATTCGAGGTCAAGTCCGGCTCGTGCGGGACAGTCGTCAGAAACGCGGAGCTGAAGATCGTTGACCCTGACACCGGCGCCACCCTTGGCCGGAACCAGTCCGGGGAGATTTGCATCCGGGGAGAACAAATCATGAAAGGTTATCTGAATGACCCGGAGTCCACGAAGAACACCATCGACAAGGGCGGTTGGCTGCACACAGGAGACATTGGTTATGTTGACGACGACGACGAGATTTTCATTGTTGACCGGCTCAAGGAAATAATAAAATACAAGGGGTTCCAAGTACCTCCTGCGGAACTTGAAGCTCTTCTCATCACACACCCTGATATCAAGGATGCTGCCGTTGTACCGATGATAGACGAAATTGCGGGTGAAGTGCCGGTTGCATTCATTGTACGGATTGAAGGATCTGCAATCAGCGAGAATGAGATCAAGCAATTTGTGGCAAAGGAGGTTGTTTTCTACAAGAGGCTCAACAAAGTTTTCTTCGCGGATTCAATTCCGAAGAGTCCTTCTGGCAAGATTCTCAGGAAGGACCTCAGAGCAAAGCTTGCAGCCGGCATCCCTACCAATGATAATACACAGTTGAAAAGCTAA
Protein Sequence
- >LOC_Os06g44620.1 protein MGSMAAAAEAAQEEETVVFRSKLPDIEIPSHLTLQAYCFEKLPEVAARPCLIDGQTGAVYSYGEVEELSRRAAAGLRRLGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTANPFYTPHEIHRQASAAGARVIVTEACAVEKVRGFAADRGIPVVAVDGDFDGCVGFGEAMLDASIEPLDADEEVHPDDVVALPYSSGTTGLPKGVMLTHRSLVTSVAQQVDGENPNLYFRREDVVLCLLPLFHIYSLNSVLLAGLRAGSAIVIMRKFDLGALVDLTRRHGVTVAPFVPPIVVEIAKSPRVTADDLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTGATLGRNQSGEICIRGEQIMKGYLNDPESTKNTIDKGGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPDIKDAAVVPMIDEIAGEVPVAFIVRIEGSAISENEIKQFVAKEVVFYKRLNKVFFADSIPKSPSGKILRKDLRAKLAAGIPTNDNTQLKS*
- >LOC_Os06g44620.2 protein MGSMAAAAEAAQEEETVVFRSKLPDIEIPSHLTLQAYCFEKLPEVAARPCLIDGQTGAVYSYGEVEELSRRAAAGLRRLGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTANPFYTPHEIHRQASAAGARVIVTEACAVEKVRGFAADRGIPVVAVDGDFDGCVGFGEAMLDASIEPLDADEEVHPDDVVALPYSSGTTGLPKGVMLTHRSLVTSVAQQVDGENPNLYFRREDVVLCLLPLFHIYSLNSVLLAGLRAGSAIVIMRKFDLGALVDLTRRHGVTVAPFVPPIVVEIAKSPRVTADDLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTGATLGRNQSGEICIRGEQIMKGYLNDPESTKNTIDKGGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPDIKDAAVVPMIDEIAGEVPVAFIVRIEGSAISENEIKQFVAKEVVFYKRLNKVFFADSIPKSPSGKILRKDLRAKLAAGIPTNDNTQLKS*