Gene Details:
- MSU gene ID: LOC_Os06g48940
- RAPdb gene ID: Os06g0702500
- Gene Symbol: OsARA1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Collapsed abnormal pollen1 gene encoding the Arabinokinase-like protein is involved in pollen development in rice . DOI: 10.1104/pp.113.216523 ; PMID: 23629836
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os06g48940.1 cDNA GAAGCAAGCGTCCCTCCAAAACGAGAGCAAAAAGGCGCAACCACCAACGCTACGGGATCCCATCCATTTTTCTTCCCTTTCCGATCCAAAAGCTTCCTTCCCTTCCGCCACCACACCATGCCACCCGCCGGAGACGCCGCCCACGCGCCGCCGCCGCCGCACCGCCGCCTCGTCTTCGCCTTCTACCTCACCGGCCACGGCTTCGGCCACGCCACCCGCGCCATCGAGGTGGTGCGGCACCTGATCGCGGCGGGGCACGAGGTGCACGTGGCCACGGCGGTGCCGGAGTTCGTCTTCACCGCCGAGCTGCCGCGCTCCCCGTCCTCCCAGGGCCTCCTCCACATCCGCAGGGCCATCCTCGACTGCGGCGCCGTCCAGACCGACGCCCTCACCGTCGACCCCCTCGCCTCCCTCCTCAAGTATCATGAGACGGCCGTGGTGCCCCGCGAGTCGATTTTGAGGACCGAGGCGGAGTGGCTCACCTCCATCAACGCAGACCTAGTGATCTCGGATGTTGTTCCTGTGGCCTGCAGGGTGGCTGCAGATGTTGGTATCCCCTCGGTCTGCATTGGGAATTTTAGTTGGGACTACATATATGCAGAATATATTGTGGCATCTGGCGATCATCACCGTTCTATTGTTTGGCAGATAGCGGAGGATTATTCTCATTGTGATATCTTACTTCGACTACCTGGATACTGCCCTATGCCGGCTTTCCGTGATGTCACTGATGTGCCTCTTGTGGTAAGAGGGCTACGCAAATCTAGATCAGAGGTGAGGAAGGAACTTGGAATAGCAGAAAATGCGAAGGTGGTGGTTTTTAATTTTGGGGGACAGCCAGCAGGATGGAACCTGAAGCAAGAATGGCTGCCTGATGGCTGGATCTGTTTGGTCTGCGGTGCATCTGATTCTCAAGAGGTTCCTCCAAACTTCATTAAGCTTGCAAAAGATGCTTACACACCTGATGCTATGGCAGCATCTGACTGCATGCTTGGGAAAATTGGATATGGAACTGCAAGTGAGGCTTTGGCCTACAAGCTGCCATTTATCTTTGTCCGCAGAGATTATTTTAATGAAGAGCCATTTTTGCGGAATTTACTTGAGCACTACCAGAGCAGTATTGAAATGACCAGAAGGGACTTCCTTCATGGGCACTGGAAACCTTATCTACTCCGTGCTCTCACACTTCAACCATGCTATGATGGTCCAACAAATGGTGGTGAGGTGGCTGCACGAATCCTCGAGGACACTGCTGTTGGGAAGAAGTGTATTTCTGACAAATTCAATGGAGCAAGACGATTGCAAGACGCCATAGTGTTAGGGTATCAATTACAAAGGGCTCCAGGGAGAGATGTAGCGATTCCTGACTGGTATTCTCTTTCCGAGACAGAAGTTGGTGCCTGTCCAATCTCAGAAAATATTAAAACAAAAGAAAGCACCGAATCATGTTTTGAAGACTTTGAGATACTTCATGGGGATCTGCAAGGATTACCAGACACCATGTCCTTTTTGAAGAGCTTATCTGAATTTAATCAAAGTGAGTTAAAGAGTAATGGGAAGCAACCTCAAGAGAGAATTGCTGCATCTGTGCTCTTTGACTGGGAGGAGGAAATGTATATAGCAAGGGCACCTGGTCGTTTAGATGTCATGGGTGGCATTGGTGACTATTCAGGAAGTCTAGTCTTGCAGCTGCCCCTTCGGGAAGCCTGTCATGTTGCTGTACAGAGGAACCACCCAAGCAATCAGAAGCTATGGGAAAATACACAGGCAAGACGGCTTGAGAACGGAGGCATGGAACCTGTGGTACAAATAGTATCATTTGGGTCTGAATTGAGTAACCGTTCACCAACTTTTGATATGAAATTGTCAGATTTAATGGATGTCGACAAACCAATATCCTACGAGAAAGCCAGAGAATTTTTTTGTCGCAACCCATCCCAGAAATGGGCTGCTTATGTCGCTGGAACAATTCTAGTGTTGATGACTGAGCTAGATGTGAAGTTCACTGACAGCATGAGCATTCTGGTTTCGTCTGATGTGCCAGAAGGCAAAGGTGTTTCTTCTTCTGCATCAGTGGAGGTTGCAACTATGGCTGCTATTGCAGCTGCCTATGGTCTAAACATTGCTCCAAGGGACCTCGCTTTGCTTTGTCAGAAGGTTGAGAATCATGTTGTCGGAGCTCCATGTGGAGTAATGGACCAAATGACATCTGCTTGTGGAGAAGCTAACAAACTCCTTGCGATGGTTTGCCAGCCTGCAGAAGTGAAGGAATTGGTTGCCATTCCTAATCATATGCGGTTTTGGGGTCTGGACTCAGGGATACGGCATAGTGTTGGTGGGGGAGATTACGGATCTGTAAGGGTAGGCACTTACATGGGACGAAAAATGATCAAGTGTGCAGCATCCGACTTAGCTTCAGAATCCTCAGTTTCTGATGCTCCTGTTCAATCTAATGACTATAAACAAAATGCCATAGAACTACTGAAATCCGAAGCTTCCCTGGAGTATTTGTGCAACATACCACCTCACAGATATGAAGCTATTTATGCAAAAGATATTCCAGAGGTCATTACTGGAGATGCATTTTTGAAGAAATATGGAGATCACGATGATACAGTAACAGCAATTGACCCTAAAAGATCTTACAATGTGAAGGCTCCTACTAGGCATCCCATATATGAGAACTTTCGAGTTGAGACCTTCAAAGCACTCTTAGAAGCAGCTAATACCGATGAGCAATTGTCAGCCCTTGGAGAACTTATGTACCAGTGCCACTACAGCTATAATGCATGTGGTCTTGGTTCTGATGGGACTGATCTGCTAGTTAATCTGGTACAAGAAATGCAGCACAGAAATATGTCAAAAGGTGAAAGTCCTAGTCTATTTGGTGCTAAGATTACCGGAGGAGGTTCCGGAGGCTCAGTTTGCGTCATGGGGAAAAACTGCCTCAAAAGCAGTGAGGAGATCATCGAGATTCAGCAAAGGTACAAGGCAGCAACTGGCTACCTACCAATCCTATTCGATGGATCATCCCCAGGCGCTGCCAAATTCGGCTACCTGAAGATCCGACGACGCCCCTCGTCACCAATTGCTGCCAAATGAAGAGATTGGCTTTCAGTTTGTCGTGCAACTCGGTCTGTCAATGAGTTTCATCAAGACCGTTGATTGAAAACATTGTGCCATCCTGTCAACTGCAATTGTTCGTTCATTGATTAATTGCTCCATTCTGGGGCACAGTCGTTGCAATTGTAGATTTCGTGTGACAGCCAATTCGTTGGGTTGCTTTCGTGTGGAACTGTGAAAATGTGAAATACTGGATTCTTCTGAAAGAAAAATGCTACTACTATTCGCGAAATCTGGTGGCTGCAAATCGAGGAGAGGACGACGGCCGGCGACACCTATCTGCCTCGCATCGAGAGCCGCAGCCCATCGCGCCGGTGGGCAGAATCTGCATCCGCGATCTCCTCTTCCTCGTGGGGGTCTTGACGATGGCGATGAGCCGATCCAGGCACCGGCAAAAGTGGGCGGTGATGGAGCACTCGAGCAGAGGAAGGGGGAGAGAAGAGGGATGAGAGGGGGTTGACCCACTGACATGTGGGTCCCACTGTTTTAGCTTTTTATTTGAGTACCAGGTGGAACCCACCTATTTTGTTTTTACTTTTTAAATTTTTAATTCTAGCTTCTAATGCCACGTCAACGTCATGTAAGAAGATGACTAAGTCAAAC
CDS Sequence
- >LOC_Os06g48940.1 CDS ATGCCACCCGCCGGAGACGCCGCCCACGCGCCGCCGCCGCCGCACCGCCGCCTCGTCTTCGCCTTCTACCTCACCGGCCACGGCTTCGGCCACGCCACCCGCGCCATCGAGGTGGTGCGGCACCTGATCGCGGCGGGGCACGAGGTGCACGTGGCCACGGCGGTGCCGGAGTTCGTCTTCACCGCCGAGCTGCCGCGCTCCCCGTCCTCCCAGGGCCTCCTCCACATCCGCAGGGCCATCCTCGACTGCGGCGCCGTCCAGACCGACGCCCTCACCGTCGACCCCCTCGCCTCCCTCCTCAAGTATCATGAGACGGCCGTGGTGCCCCGCGAGTCGATTTTGAGGACCGAGGCGGAGTGGCTCACCTCCATCAACGCAGACCTAGTGATCTCGGATGTTGTTCCTGTGGCCTGCAGGGTGGCTGCAGATGTTGGTATCCCCTCGGTCTGCATTGGGAATTTTAGTTGGGACTACATATATGCAGAATATATTGTGGCATCTGGCGATCATCACCGTTCTATTGTTTGGCAGATAGCGGAGGATTATTCTCATTGTGATATCTTACTTCGACTACCTGGATACTGCCCTATGCCGGCTTTCCGTGATGTCACTGATGTGCCTCTTGTGGTAAGAGGGCTACGCAAATCTAGATCAGAGGTGAGGAAGGAACTTGGAATAGCAGAAAATGCGAAGGTGGTGGTTTTTAATTTTGGGGGACAGCCAGCAGGATGGAACCTGAAGCAAGAATGGCTGCCTGATGGCTGGATCTGTTTGGTCTGCGGTGCATCTGATTCTCAAGAGGTTCCTCCAAACTTCATTAAGCTTGCAAAAGATGCTTACACACCTGATGCTATGGCAGCATCTGACTGCATGCTTGGGAAAATTGGATATGGAACTGCAAGTGAGGCTTTGGCCTACAAGCTGCCATTTATCTTTGTCCGCAGAGATTATTTTAATGAAGAGCCATTTTTGCGGAATTTACTTGAGCACTACCAGAGCAGTATTGAAATGACCAGAAGGGACTTCCTTCATGGGCACTGGAAACCTTATCTACTCCGTGCTCTCACACTTCAACCATGCTATGATGGTCCAACAAATGGTGGTGAGGTGGCTGCACGAATCCTCGAGGACACTGCTGTTGGGAAGAAGTGTATTTCTGACAAATTCAATGGAGCAAGACGATTGCAAGACGCCATAGTGTTAGGGTATCAATTACAAAGGGCTCCAGGGAGAGATGTAGCGATTCCTGACTGGTATTCTCTTTCCGAGACAGAAGTTGGTGCCTGTCCAATCTCAGAAAATATTAAAACAAAAGAAAGCACCGAATCATGTTTTGAAGACTTTGAGATACTTCATGGGGATCTGCAAGGATTACCAGACACCATGTCCTTTTTGAAGAGCTTATCTGAATTTAATCAAAGTGAGTTAAAGAGTAATGGGAAGCAACCTCAAGAGAGAATTGCTGCATCTGTGCTCTTTGACTGGGAGGAGGAAATGTATATAGCAAGGGCACCTGGTCGTTTAGATGTCATGGGTGGCATTGGTGACTATTCAGGAAGTCTAGTCTTGCAGCTGCCCCTTCGGGAAGCCTGTCATGTTGCTGTACAGAGGAACCACCCAAGCAATCAGAAGCTATGGGAAAATACACAGGCAAGACGGCTTGAGAACGGAGGCATGGAACCTGTGGTACAAATAGTATCATTTGGGTCTGAATTGAGTAACCGTTCACCAACTTTTGATATGAAATTGTCAGATTTAATGGATGTCGACAAACCAATATCCTACGAGAAAGCCAGAGAATTTTTTTGTCGCAACCCATCCCAGAAATGGGCTGCTTATGTCGCTGGAACAATTCTAGTGTTGATGACTGAGCTAGATGTGAAGTTCACTGACAGCATGAGCATTCTGGTTTCGTCTGATGTGCCAGAAGGCAAAGGTGTTTCTTCTTCTGCATCAGTGGAGGTTGCAACTATGGCTGCTATTGCAGCTGCCTATGGTCTAAACATTGCTCCAAGGGACCTCGCTTTGCTTTGTCAGAAGGTTGAGAATCATGTTGTCGGAGCTCCATGTGGAGTAATGGACCAAATGACATCTGCTTGTGGAGAAGCTAACAAACTCCTTGCGATGGTTTGCCAGCCTGCAGAAGTGAAGGAATTGGTTGCCATTCCTAATCATATGCGGTTTTGGGGTCTGGACTCAGGGATACGGCATAGTGTTGGTGGGGGAGATTACGGATCTGTAAGGGTAGGCACTTACATGGGACGAAAAATGATCAAGTGTGCAGCATCCGACTTAGCTTCAGAATCCTCAGTTTCTGATGCTCCTGTTCAATCTAATGACTATAAACAAAATGCCATAGAACTACTGAAATCCGAAGCTTCCCTGGAGTATTTGTGCAACATACCACCTCACAGATATGAAGCTATTTATGCAAAAGATATTCCAGAGGTCATTACTGGAGATGCATTTTTGAAGAAATATGGAGATCACGATGATACAGTAACAGCAATTGACCCTAAAAGATCTTACAATGTGAAGGCTCCTACTAGGCATCCCATATATGAGAACTTTCGAGTTGAGACCTTCAAAGCACTCTTAGAAGCAGCTAATACCGATGAGCAATTGTCAGCCCTTGGAGAACTTATGTACCAGTGCCACTACAGCTATAATGCATGTGGTCTTGGTTCTGATGGGACTGATCTGCTAGTTAATCTGGTACAAGAAATGCAGCACAGAAATATGTCAAAAGGTGAAAGTCCTAGTCTATTTGGTGCTAAGATTACCGGAGGAGGTTCCGGAGGCTCAGTTTGCGTCATGGGGAAAAACTGCCTCAAAAGCAGTGAGGAGATCATCGAGATTCAGCAAAGGTACAAGGCAGCAACTGGCTACCTACCAATCCTATTCGATGGATCATCCCCAGGCGCTGCCAAATTCGGCTACCTGAAGATCCGACGACGCCCCTCGTCACCAATTGCTGCCAAATGA
Protein Sequence
- >LOC_Os06g48940.1 protein MPPAGDAAHAPPPPHRRLVFAFYLTGHGFGHATRAIEVVRHLIAAGHEVHVATAVPEFVFTAELPRSPSSQGLLHIRRAILDCGAVQTDALTVDPLASLLKYHETAVVPRESILRTEAEWLTSINADLVISDVVPVACRVAADVGIPSVCIGNFSWDYIYAEYIVASGDHHRSIVWQIAEDYSHCDILLRLPGYCPMPAFRDVTDVPLVVRGLRKSRSEVRKELGIAENAKVVVFNFGGQPAGWNLKQEWLPDGWICLVCGASDSQEVPPNFIKLAKDAYTPDAMAASDCMLGKIGYGTASEALAYKLPFIFVRRDYFNEEPFLRNLLEHYQSSIEMTRRDFLHGHWKPYLLRALTLQPCYDGPTNGGEVAARILEDTAVGKKCISDKFNGARRLQDAIVLGYQLQRAPGRDVAIPDWYSLSETEVGACPISENIKTKESTESCFEDFEILHGDLQGLPDTMSFLKSLSEFNQSELKSNGKQPQERIAASVLFDWEEEMYIARAPGRLDVMGGIGDYSGSLVLQLPLREACHVAVQRNHPSNQKLWENTQARRLENGGMEPVVQIVSFGSELSNRSPTFDMKLSDLMDVDKPISYEKAREFFCRNPSQKWAAYVAGTILVLMTELDVKFTDSMSILVSSDVPEGKGVSSSASVEVATMAAIAAAYGLNIAPRDLALLCQKVENHVVGAPCGVMDQMTSACGEANKLLAMVCQPAEVKELVAIPNHMRFWGLDSGIRHSVGGGDYGSVRVGTYMGRKMIKCAASDLASESSVSDAPVQSNDYKQNAIELLKSEASLEYLCNIPPHRYEAIYAKDIPEVITGDAFLKKYGDHDDTVTAIDPKRSYNVKAPTRHPIYENFRVETFKALLEAANTDEQLSALGELMYQCHYSYNACGLGSDGTDLLVNLVQEMQHRNMSKGESPSLFGAKITGGGSGGSVCVMGKNCLKSSEEIIEIQQRYKAATGYLPILFDGSSPGAAKFGYLKIRRRPSSPIAAK*