Gene Details:
- MSU gene ID: LOC_Os07g08880
- RAPdb gene ID: Os07g0186400
- Gene Symbol: OsSHL1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Polycomb-mediated gene silencing by the BAH-EMF1 complex in plants . DOI: 10.1038/s41588-018-0190-0 ; PMID: 30082786
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os07g08880.3 cDNA GAGACCCAAAAAGAAAACCACGAATTCCCAATAAAGAAATAGGCAAAATTCCCCATCTCCTCGTCTCCTCCCAACTCCAAACCCTAGCTCCCACCCCCTCTCGCCGTCGCCGTCGCGTCCCATGGCGAAGTCGCGGCCGCCCAAGCGGATCCTCGAGTCCTACACCATCAAGGGCTCCGACAAAGTCATCAAGCCTGGGGACTGTGTGCTAATGAGGGCATCTGATACATCAAAGCCACCCTATGTGGCAAGAGTTGAGGCTATTGAGGCTGCAGGGTCACGAGGCACAAATGTGAGAGTACGGGTGCGGTGGTACTATCGGCCAGAGGAGTCCATGGGTGGAAGGCGTCCATTTCATGGTGCCAAAGAGGTGTTCCTCTCGGATCACTATGACGTACAGAGTGCTGACACCATAGAGGGAAAGTGCAACGTTCACAGCTTCCGTAGCTACACAAAGCTTGATTCTGTCAATGCTGAGGACTTCTTCTGTCGCTTTGAGTACAAATCAGCCACAGGAAGCTTCGTGCCCGACCGCATTGCTGTGTTCTGCAAGTGTGAGATGCCATACAATCCTGATGACCTTATGATCCAATGTTTCACCCTTCTTGCATTGGAATGACTATTAAAGATGCAAAAAAACTAGAGCATTTTTTCTGCCAGAGCTGTACTGCGGAAAATGGAAAGATGGCTGAGAATTCTCATGAAGCTACAGCGCAATCCGAAGAAAAGCAGGTGGAGTCAAAAAGACGGAGAAGGTGACTGCCCCCCAGATTCATTGACGAGATACACCTGGATGTACAAAGCCTTCTCAAGTTGGTGTAATGCTATTTATTTGTCATGGCAAGTGTGTGTGACCCACGACCACGAGAGTCCCTTCCTGTAATGTCAGTCGCATGGTGTACATAAACTTTTCAACCTGAGACTGTTGTATTAGGAGACGACACGACCTGTTGTTGTTGCATGATGTTTTTAGCAGCGTCAGAATTAGCATGGTAGAGTCGGGTGATGAAGCCCCTCGCGGGCATTAGGACTCCCGTATGGATGTTATCACTGATCATACATTGATACTACATTGGATGCAGTTGAGTCTGTCATCTGCGTTTGTCTTTGGAGAATTCTTGTACCATCAATCCATCATGTGAACTTTGATTCTTTTCGAGACGCTTCGTAATTAATGCAGGCATTTCTGTGTGGGTAGTCA
- >LOC_Os07g08880.2 cDNA GAGACCCAAAAAGAAAACCACGAATTCCCAATAAAGAAATAGGCAAAATTCCCCATCTCCTCGTCTCCTCCCAACTCCAAACCCTAGCTCCCACCCCCTCTCGCCGTCGCCGTCGCGTCCCATGGCGAAGTCGCGGCCGCCCAAGCGGATCCTCGAGTCCTACACCATCAAGGGCTCCGACAAAGTCATCAAGCCTGGGGACTGTGTGCTAATGAGGGCATCTGATACATCAAAGCCACCCTATGTGGCAAGAGTTGAGGCTATTGAGGCTGCAGGGTCACGAGGCACAAATGTGAGAGTACGGGTGCGGTGGTACTATCGGCCAGAGGAGTCCATGGGTGGAAGGCGTCCATTTCATGGTGCCAAAGAGGTGTTCCTCTCGGATCACTATGACGTACAGAGTGCTGACACCATAGAGGGAAAGTGCAACGTTCACAGCTTCCGTAGCTACACAAAGCTTGATTCTGTCAATGCTGAGGACTTCTTCTGTCGCTTTGAGTACAAATCAGCCACAGGAAGCTTCGTGCCCGACCGCATTGCTGTGTTCTGCAAGTGTGAGATGCCATACAATCCTGATGACCTTATGATCCAATGTTTCACCCTTCTTGCATTGGAATGACTATTAAAGATGCAAAAAAACTAGAGCATTTTTTCTGCCAGAGCTGTACTGCGGAAAATGGAAAGATGGCTGAGAATTCTCATGAAGCTACAGCGCAATCCGAAGAAAAGCAGGTGGAGTCAAAAAGACGGAGAAGGTGACTGCCCCCCAGATTCATTGACGAGATACACCTGGATGTACAAAGCCTTCTCAAGTTGGTGTAATGCTATTTATTTGTCATGGCAAGTGTGTGTGACCCACGACCACGAGAGTCCCTTCCTGTAATGTCAGTCGCATGGTGTACATAAACTTTTCAACCTGAGACTGTTGTATTAGGAGACGACACGACCTGTTGTTGTTGCATGATGTTTTTAGCAGCGTCAGAATTAGCATGGTAGAGTCGGGTGATGAAGCCCCTCGCGGGCATTAGGACTCCCGTATGGATGTTATCACTGATCATACATTGATACTACATTGGATGCAGTTGAGTCTGTCATCTGCGTTTGTCTTTGGAGAATTCTTGTACCATCAATCCATCATGTGAACTTTGATTCTTTTCGAGACGCTTCGTAATTAATGCAGGCATTTCTGTGTGGGTAGTCA
- >LOC_Os07g08880.1 cDNA GAGACCCAAAAAGAAAACCACGAATTCCCAATAAAGAAATAGGCAAAATTCCCCATCTCCTCGTCTCCTCCCAACTCCAAACCCTAGCTCCCACCCCCTCTCGCCGTCGCCGTCGCGTCCCATGGCGAAGTCGCGGCCGCCCAAGCGGATCCTCGAGTCCTACACCATCAAGGGCTCCGACAAAGTCATCAAGCCTGGGGACTGTGTGCTAATGAGGGCATCTGATACATCAAAGCCACCCTATGTGGCAAGAGTTGAGGCTATTGAGGCTGCAGGGTCACGAGGCACAAATGTGAGAGTACGGGTGCGGTGGTACTATCGGCCAGAGGAGTCCATGGGTGGAAGGCGTCCATTTCATGGTGCCAAAGAGGTGTTCCTCTCGGATCACTATGACGTACAGAGTGCTGACACCATAGAGGGAAAGTGCAACGTTCACAGCTTCCGTAGCTACACAAAGCTTGATTCTGTCAATGCTGAGGACTTCTTCTGTCGCTTTGAGTACAAATCAGCCACAGGAAGCTTCGTGCCCGACCGCATTGCTGTGTTCTGCAAGTGTGAGATGCCATACAATCCTGATGACCTTATGATCCAATGTTTCACCCTTCTTGCATTGGAATGACTATTAAAGATGCAAAAAAACTAGAGCATTTTTTCTGCCAGAGCTGTACTGCGGAAAATGGAAAGATGGCTGAGAATTCTCATGAAGCTACAGCGCAATCCGAAGAAAAGCAGGTGGAGTCAAAAAGACGGAGAAGGTGACTGCCCCCCAGATTCATTGACGAGATACACCTGGATGTACAAAGCCTTCTCAAGTTGGTGTAATGCTATTTATTTGTCATGGCAAGTGTGTGTGACCCACGACCACGAGAGTCCCTTCCTGTAATGTCAGTCGCATGGTGTACATAAACTTTTCAACCTGAGACTGTTGTATTAGGAGACGACACGACCTGTTGTTGTTGCATGATGTTTTTAGCAGCGTCAGAATTAGCATGGTAGAGTCGGGTGATGAAGCCCCTCGCGGGCATTAGGACTCCCGTATGGATGTTATCACTGATCATACATTGATACTACATTGGATGCAGTTGAGTCTGTCATCTGCGTTTGTCTTTGGAGAATTCTTGTACCATCAATCCATCATGTGAACTTTGATTCTTTTCGAGACGCTTCGTAATTAATGCAGGCATTTCTGTGTGGGTAGTCA
- >LOC_Os07g08880.4 cDNA GAGACCCAAAAAGAAAACCACGAATTCCCAATAAAGAAATAGGCAAAATTCCCCATCTCCTCGTCTCCTCCCAACTCCAAACCCTAGCTCCCACCCCCTCTCGCCGTCGCCGTCGCGTCCCATGGCGAAGTCGCGGCCGCCCAAGCGGATCCTCGAGTCCTACACCATCAAGGGCTCCGACAAAGTCATCAAGCCTGGGGACTGTGTGCTAATGAGGGCATCTGATACATCAAAGCCACCCTATGTGGCAAGAGTTGAGGCTATTGAGGCTGCAGGGTCACGAGGCACAAATGTGAGAGTACGGGTGCGGTGGTACTATCGGCCAGAGGAGTCCATGGGTGGAAGGCGTCCATTTCATGGTGCCAAAGAGGTGTTCCTCTCGGATCACTATGACGTACAGAGTGCTGACACCATAGAGGGAAAGTGCAACGTTCACAGCTTCCGTAGCTACACAAAGCTTGATTCTGTCAATGCTGAGGACTTCTTCTGTCGCTTTGAGTACAAATCAGCCACAGGAAGCTTCGTGCCCGACCGCATTGCTGTGTTCTGCAAGTGTGAGATGCCATACAATCCTGATGACCTTATGATCCAATGTTTCACCCTTCTTGCATTGGAATGACTATTAAAGATGCAAAAAAACTAGAGCATTTTTTCTGCCAGAGCTGTACTGCGGAAAATGGAAAGATGGCTGAGAATTCTCATGAAGCTACAGCGCAATCCGAAGAAAAGCAGGTGGAGTCAAAAAGACGGAGAAGGTGACTGCCCCCCAGATTCATTGACGAGATACACCTGGATGTACAAAGCCTTCTCAAGTTGGTGTAATGCTATTTATTTGTCATGGCAAGTGTGTGTGACCCACGACCACGAGAGTCCCTTCCTGTAATGTCAGTCGCATGGTGTACATAAACTTTTCAACCTGAGACTGTTGTATTAGGAGACGACACGACCTGTTGTTGTTGCATGATGTTTTTAGCAGCGTCAGAATTAGCATGGTAGAGTCGGGTGATGAAGCCCCTCGCGGGCATTAGGACTCCCGTATGGATGTTATCACTGATCATACATTGATACTACATTGGATGCAGTTGAGTCTGTCATCTGCGTTTGTCTTTGGAGAATTCTTGTACCATCAATCCATCATGTGAACTTTGATTCTTTTCGAGACGCTTCGTAATTAATGCAGGCATTTCTGTGTGGGTAGTCA
CDS Sequence
- >LOC_Os07g08880.3 CDS ATGGCGAAGTCGCGGCCGCCCAAGCGGATCCTCGAGTCCTACACCATCAAGGGCTCCGACAAAGTCATCAAGCCTGGGGACTGTGTGCTAATGAGGGCATCTGATACATCAAAGCCACCCTATGTGGCAAGAGTTGAGGCTATTGAGGCTGCAGGGTCACGAGGCACAAATGTGAGAGTACGGGTGCGGTGGTACTATCGGCCAGAGGAGTCCATGGGTGGAAGGCGTCCATTTCATGGTGCCAAAGAGGTGTTCCTCTCGGATCACTATGACGTACAGAGTGCTGACACCATAGAGGGAAAGTGCAACGTTCACAGCTTCCGTAGCTACACAAAGCTTGATTCTGTCAATGCTGAGGACTTCTTCTGTCGCTTTGAGTACAAATCAGCCACAGGAAGCTTCGTGCCCGACCGCATTGCTGTGTTCTGCAAGTGTGAGATGCCATACAATCCTGATGACCTTATGATCCAATGTTTCACCCTTCTTGCATTGGAATGA
- >LOC_Os07g08880.2 CDS ATGGCGAAGTCGCGGCCGCCCAAGCGGATCCTCGAGTCCTACACCATCAAGGGCTCCGACAAAGTCATCAAGCCTGGGGACTGTGTGCTAATGAGGGCATCTGATACATCAAAGCCACCCTATGTGGCAAGAGTTGAGGCTATTGAGGCTGCAGGGTCACGAGGCACAAATGTGAGAGTACGGGTGCGGTGGTACTATCGGCCAGAGGAGTCCATGGGTGGAAGGCGTCCATTTCATGGTGCCAAAGAGGTGTTCCTCTCGGATCACTATGACGTACAGAGTGCTGACACCATAGAGGGAAAGTGCAACGTTCACAGCTTCCGTAGCTACACAAAGCTTGATTCTGTCAATGCTGAGGACTTCTTCTGTCGCTTTGAGTACAAATCAGCCACAGGAAGCTTCGTGCCCGACCGCATTGCTGTGTTCTGCAAGTGTGAGATGCCATACAATCCTGATGACCTTATGATCCAATGTTTCACCCTTCTTGCATTGGAATGA
- >LOC_Os07g08880.1 CDS ATGGCGAAGTCGCGGCCGCCCAAGCGGATCCTCGAGTCCTACACCATCAAGGGCTCCGACAAAGTCATCAAGCCTGGGGACTGTGTGCTAATGAGGGCATCTGATACATCAAAGCCACCCTATGTGGCAAGAGTTGAGGCTATTGAGGCTGCAGGGTCACGAGGCACAAATGTGAGAGTACGGGTGCGGTGGTACTATCGGCCAGAGGAGTCCATGGGTGGAAGGCGTCCATTTCATGGTGCCAAAGAGGTGTTCCTCTCGGATCACTATGACGTACAGAGTGCTGACACCATAGAGGGAAAGTGCAACGTTCACAGCTTCCGTAGCTACACAAAGCTTGATTCTGTCAATGCTGAGGACTTCTTCTGTCGCTTTGAGTACAAATCAGCCACAGGAAGCTTCGTGCCCGACCGCATTGCTGTGTTCTGCAAGTGTGAGATGCCATACAATCCTGATGACCTTATGATCCAATGTTTCACCCTTCTTGCATTGGAATGA
- >LOC_Os07g08880.4 CDS ATGGCGAAGTCGCGGCCGCCCAAGCGGATCCTCGAGTCCTACACCATCAAGGGCTCCGACAAAGTCATCAAGCCTGGGGACTGTGTGCTAATGAGGGCATCTGATACATCAAAGCCACCCTATGTGGCAAGAGTTGAGGCTATTGAGGCTGCAGGGTCACGAGGCACAAATGTGAGAGTACGGGTGCGGTGGTACTATCGGCCAGAGGAGTCCATGGGTGGAAGGCGTCCATTTCATGGTGCCAAAGAGGTGTTCCTCTCGGATCACTATGACGTACAGAGTGCTGACACCATAGAGGGAAAGTGCAACGTTCACAGCTTCCGTAGCTACACAAAGCTTGATTCTGTCAATGCTGAGGACTTCTTCTGTCGCTTTGAGTACAAATCAGCCACAGGAAGCTTCGTGCCCGACCGCATTGCTGTGTTCTGCAAGTGTGAGATGCCATACAATCCTGATGACCTTATGATCCAATGTTTCACCCTTCTTGCATTGGAATGA
Protein Sequence
- >LOC_Os07g08880.3 protein MAKSRPPKRILESYTIKGSDKVIKPGDCVLMRASDTSKPPYVARVEAIEAAGSRGTNVRVRVRWYYRPEESMGGRRPFHGAKEVFLSDHYDVQSADTIEGKCNVHSFRSYTKLDSVNAEDFFCRFEYKSATGSFVPDRIAVFCKCEMPYNPDDLMIQCFTLLALE*
- >LOC_Os07g08880.2 protein MAKSRPPKRILESYTIKGSDKVIKPGDCVLMRASDTSKPPYVARVEAIEAAGSRGTNVRVRVRWYYRPEESMGGRRPFHGAKEVFLSDHYDVQSADTIEGKCNVHSFRSYTKLDSVNAEDFFCRFEYKSATGSFVPDRIAVFCKCEMPYNPDDLMIQCFTLLALE*
- >LOC_Os07g08880.1 protein MAKSRPPKRILESYTIKGSDKVIKPGDCVLMRASDTSKPPYVARVEAIEAAGSRGTNVRVRVRWYYRPEESMGGRRPFHGAKEVFLSDHYDVQSADTIEGKCNVHSFRSYTKLDSVNAEDFFCRFEYKSATGSFVPDRIAVFCKCEMPYNPDDLMIQCFTLLALE*
- >LOC_Os07g08880.4 protein MAKSRPPKRILESYTIKGSDKVIKPGDCVLMRASDTSKPPYVARVEAIEAAGSRGTNVRVRVRWYYRPEESMGGRRPFHGAKEVFLSDHYDVQSADTIEGKCNVHSFRSYTKLDSVNAEDFFCRFEYKSATGSFVPDRIAVFCKCEMPYNPDDLMIQCFTLLALE*