Gene Details:
- MSU gene ID: LOC_Os07g22600
- RAPdb gene ID: Os07g0408700
- Gene Symbol: OsSPDS1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- In contrast, no such induction of the paralogous OsSPDS1 was observed during the chilling treatment.
Function-related keywords:
Literature:
- A distinctive class of spermidine synthase is involved in chilling response in rice . DOI: 10.1016/j.jplph.2003.11.002 ; PMID: 15310079
Related News:
Gene Resources:
- NCBI ID: AJ251298
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os07g22600.2 cDNA ATTGATGCGACTTGCAGCCCAAAACCCCCAAAAAGCCACAGAAGAGAGACAGGGGAGAAAACCCTAATCTCAAGGCCGCGGCTGTGAGCGCTCCTCCCGTCTCTCCCCCAACCCGCCGCCAGCCACCGAGCTCGCCACCGTCTCCGTTGCCTCGCCGTGCTCTAGGTTCTCGGATGGAGGCCGAGGCGGCGGCGAAGAGGGCGCGGGAGAGCGGTGACGCGGCGGCGGCCGGTGCCGGCGAGCAGGCGGGTATCTCTGCCGTCATCCCTGGATGGTTCTCCGAGATTAGCCCCATGTGGCCTGGTGAGGCACACTCATTGAAGGTCGAAAAGGTACTATTCCAAGGAAAGTCGGACTACCAAAATGTGATGGTGTTTCAGTCCTCCACGTACGGCAAGGTGCTTGTGCTGGATGGAGTGATTCAGGTCACTGAGAGGGATGAGTGTGCTTACCAAGAGATGATTACCCACCTCCCCCTTTGCTCTATCAAAGATCCCAAGAAGGTGTTAGTTATTGGAGGTGGAGATGGTGGTGTTTTGCGTGAAGTTTCACGACATTCCTCGGTGGAGCAAATTGACATATGTGAAATTGATAAGATGGTGGTAGATGTCTCCAAACAATTTTTTCCTCATCTGGCTGTTGGATTTGAAGACCCCCGTGTGTCATTACACATTGGAGATGGCGTGGCCTTTTTGAAAAATGCTCCAGAGGGTACTTATGATGCAGTTATTGTGGATTCCTCTGATCCAATAGAGCTTTTCGAGAAGCCTTTCTTCCAGTCAGTTGCCAGAGCTTTGCGTCCTGGTGGTGTTGTATGTACCCAGGCAGAGAGCATATGGTTGCATATGCATATTATTGAAGATATTGTAGCTAATTGTCGCCAAGTTTTTAAAGGCTCAGTGAATTATGCTTGGACAACAGTACCAACATACCCTAGTGGTGTTATTGGTTTTATGCTTTGCTCCACCGAGGGGCCTACTGTTGATTTCCAGCATCCTATTTTTAACATTGAGGATAATGAGTTCTCAACAAAATCGAAAGGACCACTTAAGTTCTACAATTCCGAGATCCACTCAGCATCATTTTGTTTGCCGTCTTTTGCGAAGAGAGTCATTGGATCCAAGGCCAACTAGATCAAAGATCACTGAGCCCAAGGCCAACTGGACTGGAATCCCTCCGACAAGAGATTTGGTTGTAGCAGAAAGAGCAATGACCCCTTTTTTCCCATTTAAATAAAAATTGGAGATGTAAACGGTTATCCAAGTGCTTTTGAATTTTGTCTCAGTATGAGAACGTTTTGTATTTGGTAACTGTTTTCCCGCATCTCCCTTACCATTTACCAAAATGAGTATTGCTGTAGTTTTCATCTGAGGTGCTTCTTGAATTCTTGCAGTCAGTCTCATTTTCAGCTCGAGTGAGACGGTGGTTTCTTTGAAGGGCTTAGTGCTTTGTTTTGGGGGTTTGGGGGGACATGGATCCTCTACCTTTGGCTAGTAAAGTACCATCCAAACTAATTGAATGGACAGATTTGCTTATAGGGAGATAG
- >LOC_Os07g22600.1 cDNA ATTGATGCGACTTGCAGCCCAAAACCCCCAAAAAGCCACAGAAGAGAGACAGGGGAGAAAACCCTAATCTCAAGGCCGCGGCTGTGAGCGCTCCTCCCGTCTCTCCCCCAACCCGCCGCCAGCCACCGAGCTCGCCACCGTCTCCGTTGCCTCGCCGTGCTCTAGGTTCTCGGATGGAGGCCGAGGCGGCGGCGAAGAGGGCGCGGGAGAGCGGTGACGCGGCGGCGGCCGGTGCCGGCGAGCAGGCGGGTATCTCTGCCGTCATCCCTGGATGGTTCTCCGAGATTAGCCCCATGTGGCCTGGTGAGGCACACTCATTGAAGGTCGAAAAGGTACTATTCCAAGGAAAGTCGGACTACCAAAATGTGATGGTGTTTCAGTCCTCCACGTACGGCAAGGTGCTTGTGCTGGATGGAGTGATTCAGGTCACTGAGAGGGATGAGTGTGCTTACCAAGAGATGATTACCCACCTCCCCCTTTGCTCTATCAAAGATCCCAAGAAGGTGTTAGTTATTGGAGGTGGAGATGGTGGTGTTTTGCGTGAAGTTTCACGACATTCCTCGGTGGAGCAAATTGACATATGTGAAATTGATAAGATGGTGGTAGATGTCTCCAAACAATTTTTTCCTCATCTGGCTGTTGGATTTGAAGACCCCCGTGTGTCATTACACATTGGAGATGGCGTGGCCTTTTTGAAAAATGCTCCAGAGGGTACTTATGATGCAGTTATTGTGGATTCCTCTGATCCAATAGAGCTTTTCGAGAAGCCTTTCTTCCAGTCAGTTGCCAGAGCTTTGCGTCCTGGTGGTGTTGTATGTACCCAGGCAGAGAGCATATGGTTGCATATGCATATTATTGAAGATATTGTAGCTAATTGTCGCCAAGTTTTTAAAGGCTCAGTGAATTATGCTTGGACAACAGTACCAACATACCCTAGTGGTGTTATTGGTTTTATGCTTTGCTCCACCGAGGGGCCTACTGTTGATTTCCAGCATCCTATTTTTAACATTGAGGATAATGAGTTCTCAACAAAATCGAAAGGACCACTTAAGTTCTACAATTCCGAGATCCACTCAGCATCATTTTGTTTGCCGTCTTTTGCGAAGAGAGTCATTGGATCCAAGGCCAACTAGATCAAAGATCACTGAGCCCAAGGCCAACTGGACTGGAATCCCTCCGACAAGAGATTTGGTTGTAGCAGAAAGAGCAATGACCCCTTTTTTCCCATTTAAATAAAAATTGGAGATGTAAACGGTTATCCAAGTGCTTTTGAATTTTGTCTCAGTATGAGAACGTTTTGTATTTGGTAACTGTTTTCCCGCATCTCCCTTACCATTTACCAAAATGAGTATTGCTGTAGTTTTCATCTGAGGTGCTTCTTGAATTCTTGCAGTCAGTCTCATTTTCAGCTCGAGTGAGACGGTGGTTTCTTTGAAGGGCTTAGTGCTTTGTTTTGGGGGTTTGGGGGGACATGGATCCTCTACCTTTGGCTAGTAAAGTACCATCCAAACTAATTGAATGGACAGATTTGCTTATAGGGAGATAG
CDS Sequence
- >LOC_Os07g22600.2 CDS ATGGAGGCCGAGGCGGCGGCGAAGAGGGCGCGGGAGAGCGGTGACGCGGCGGCGGCCGGTGCCGGCGAGCAGGCGGGTATCTCTGCCGTCATCCCTGGATGGTTCTCCGAGATTAGCCCCATGTGGCCTGGTGAGGCACACTCATTGAAGGTCGAAAAGGTACTATTCCAAGGAAAGTCGGACTACCAAAATGTGATGGTGTTTCAGTCCTCCACGTACGGCAAGGTGCTTGTGCTGGATGGAGTGATTCAGGTCACTGAGAGGGATGAGTGTGCTTACCAAGAGATGATTACCCACCTCCCCCTTTGCTCTATCAAAGATCCCAAGAAGGTGTTAGTTATTGGAGGTGGAGATGGTGGTGTTTTGCGTGAAGTTTCACGACATTCCTCGGTGGAGCAAATTGACATATGTGAAATTGATAAGATGGTGGTAGATGTCTCCAAACAATTTTTTCCTCATCTGGCTGTTGGATTTGAAGACCCCCGTGTGTCATTACACATTGGAGATGGCGTGGCCTTTTTGAAAAATGCTCCAGAGGGTACTTATGATGCAGTTATTGTGGATTCCTCTGATCCAATAGAGCTTTTCGAGAAGCCTTTCTTCCAGTCAGTTGCCAGAGCTTTGCGTCCTGGTGGTGTTGTATGTACCCAGGCAGAGAGCATATGGTTGCATATGCATATTATTGAAGATATTGTAGCTAATTGTCGCCAAGTTTTTAAAGGCTCAGTGAATTATGCTTGGACAACAGTACCAACATACCCTAGTGGTGTTATTGGTTTTATGCTTTGCTCCACCGAGGGGCCTACTGTTGATTTCCAGCATCCTATTTTTAACATTGAGGATAATGAGTTCTCAACAAAATCGAAAGGACCACTTAAGTTCTACAATTCCGAGATCCACTCAGCATCATTTTGTTTGCCGTCTTTTGCGAAGAGAGTCATTGGATCCAAGGCCAACTAG
- >LOC_Os07g22600.1 CDS ATGGAGGCCGAGGCGGCGGCGAAGAGGGCGCGGGAGAGCGGTGACGCGGCGGCGGCCGGTGCCGGCGAGCAGGCGGGTATCTCTGCCGTCATCCCTGGATGGTTCTCCGAGATTAGCCCCATGTGGCCTGGTGAGGCACACTCATTGAAGGTCGAAAAGGTACTATTCCAAGGAAAGTCGGACTACCAAAATGTGATGGTGTTTCAGTCCTCCACGTACGGCAAGGTGCTTGTGCTGGATGGAGTGATTCAGGTCACTGAGAGGGATGAGTGTGCTTACCAAGAGATGATTACCCACCTCCCCCTTTGCTCTATCAAAGATCCCAAGAAGGTGTTAGTTATTGGAGGTGGAGATGGTGGTGTTTTGCGTGAAGTTTCACGACATTCCTCGGTGGAGCAAATTGACATATGTGAAATTGATAAGATGGTGGTAGATGTCTCCAAACAATTTTTTCCTCATCTGGCTGTTGGATTTGAAGACCCCCGTGTGTCATTACACATTGGAGATGGCGTGGCCTTTTTGAAAAATGCTCCAGAGGGTACTTATGATGCAGTTATTGTGGATTCCTCTGATCCAATAGAGCTTTTCGAGAAGCCTTTCTTCCAGTCAGTTGCCAGAGCTTTGCGTCCTGGTGGTGTTGTATGTACCCAGGCAGAGAGCATATGGTTGCATATGCATATTATTGAAGATATTGTAGCTAATTGTCGCCAAGTTTTTAAAGGCTCAGTGAATTATGCTTGGACAACAGTACCAACATACCCTAGTGGTGTTATTGGTTTTATGCTTTGCTCCACCGAGGGGCCTACTGTTGATTTCCAGCATCCTATTTTTAACATTGAGGATAATGAGTTCTCAACAAAATCGAAAGGACCACTTAAGTTCTACAATTCCGAGATCCACTCAGCATCATTTTGTTTGCCGTCTTTTGCGAAGAGAGTCATTGGATCCAAGGCCAACTAG
Protein Sequence
- >LOC_Os07g22600.2 protein MEAEAAAKRARESGDAAAAGAGEQAGISAVIPGWFSEISPMWPGEAHSLKVEKVLFQGKSDYQNVMVFQSSTYGKVLVLDGVIQVTERDECAYQEMITHLPLCSIKDPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVDVSKQFFPHLAVGFEDPRVSLHIGDGVAFLKNAPEGTYDAVIVDSSDPIELFEKPFFQSVARALRPGGVVCTQAESIWLHMHIIEDIVANCRQVFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPTVDFQHPIFNIEDNEFSTKSKGPLKFYNSEIHSASFCLPSFAKRVIGSKAN*
- >LOC_Os07g22600.1 protein MEAEAAAKRARESGDAAAAGAGEQAGISAVIPGWFSEISPMWPGEAHSLKVEKVLFQGKSDYQNVMVFQSSTYGKVLVLDGVIQVTERDECAYQEMITHLPLCSIKDPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVDVSKQFFPHLAVGFEDPRVSLHIGDGVAFLKNAPEGTYDAVIVDSSDPIELFEKPFFQSVARALRPGGVVCTQAESIWLHMHIIEDIVANCRQVFKGSVNYAWTTVPTYPSGVIGFMLCSTEGPTVDFQHPIFNIEDNEFSTKSKGPLKFYNSEIHSASFCLPSFAKRVIGSKAN*