Gene Details:
- MSU gene ID: LOC_Os07g43530
- RAPdb gene ID: Os07g0628500
- Gene Symbol: OsbHLH1 OsbHLH062
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The transcription of the OsbHLH1 gene was specifically induced in roots of rice seedlings by cold but not by NaCl, PEG and ABA treatments.
- A rice transcription factor OsbHLH1 is involved in cold stress response.
- These results indicate that the OsbHLH1 may function as a transcription factor in a cold signal-transduction pathway.
- OsJAZ9 interacts with several bHLH transcription factors including OsbHLH062 via the Jas domain.
- OsbHLH062 can bind to an E-box in the promoters of the ion transporter genes such as OsHAK21, and most of these ion transporter genes are responsive to JA treatment.
Function-related keywords:
- ABA , root , seedling , cold-stress , transcription-factor , transporter , ja , JA
Literature:
- A rice transcription factor OsbHLH1 is involved in cold stress response . DOI: 10.1007/s00122-003-1378-x ; PMID: 12920519
- OsJAZ9 acts as a transcriptional regulator in jasmonate signaling and modulates salt stress tolerance in rice . DOI: 10.1016/j.plantsci.2014.12.010 ; PMID: 25617318
Related News:
Gene Resources:
- NCBI ID: AY222337
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os07g43530.1 cDNA GGTGGCGTCCACGCGCCCACCCCACGCGCGTCACCGTCGCTCGCCCAAACTGCGGGCGCGTCGCACGCCGCCCTCCCATCGTTTTCTCCCATTCTTTCCCCCTCCTCCTCGTGCAACCACCCAACCACTGCAGCCAGCCACGAGCCGAGGAAGCCGAGGCCGAGGAGGAAGACGACGAAGACAAGTAGCGCAAGGAACCCTCGAACCGGGAGGCCGCCGCGGCTCCGATCTGGGAGGGGGAGGTCGAGATGGTGCCCAGGGACAGGGTGAATGCCGCTGCCGCTGGTGGCGGCGGCGAGGGGAGGCTGGTCCAGAGCGGTATAGTGAACAAGAAGTGTGATAAGAAGGCTCCAAAGAGAATCCATAAATCAGAGAGGGAGAAACTTAAGCGGGACAAGCAGAATGACCTCTTTAATGAGCTGGGAAACTTGCTAGAACCTGACAGGCAGAACAATGGGAAGGCATGTGTACTGGGTGAAACTACACGAATACTAAAAGATTTACTTTCACAAGTGGAATCTCTCCGGAAGGAGAATAGTTCACTGAAGAATGAATCTCATTATGTTGCATTGGAGAGAAATGAACTGCACGACGATAACAGCATGCTTCGTACTGAAATCTTGGAGCTTCAAAACGAGCTTAGGACGCGGATGGAAGGCAATCCTGTTTGGAGTCATGTAAACACCAGACCAGCTCTCAGGGTACCTTATCCGACAACCGGAGTGTTCCCAGTACAGCACCTGCCACATTTACCAGTCACCACGACGGCAGCATTTCCTCAGCAGCTACCGGTTATCATCGAGCAGCACTATGCCGCCACGCCAAGAGAACTTCAGCTCTTCCCTGAGTCTGCGACCAGCGAAGACAGCGAACCGTCACAAGAACACGGGATTTCTGACCATGTAACACGGCCTCAGCCAAGGTACCCAACACCAACGGCCACTTTGCCAGTAAACCTGTTTCCAGTGTTTCCAGGAAGACAAGATCAACAATGTAGCAGTGGTACTTCTGGCACTAACGAGGAAGACCGTATAGGTAGATCTTAGGTACACTACATAACGAGAGGTCCACACAATGATTTGAGAATTCCTTTAGTTTCAACGTTTAACTTTGCAAGTTTAGCAAATGTGAAACAGAGATCTGCGACTGTGCTCATGGGTAGCACCTAATCTGTATATCTGAATCTCAGTTTTAAGTGGTCAAATAGGTGACATTCAGAAAAGTTTGAAATGCTTTGATTATTCTGTA
- >LOC_Os07g43530.2 cDNA GGTGGCGTCCACGCGCCCACCCCACGCGCGTCACCGTCGCTCGCCCAAACTGCGGGCGCGTCGCACGCCGCCCTCCCATCGTTTTCTCCCATTCTTTCCCCCTCCTCCTCGTGCAACCACCCAACCACTGCAGCCAGCCACGAGCCGAGGAAGCCGAGGCCGAGGAGGAAGACGACGAAGACAAGTAGCGCAAGGAACCCTCGAACCGGGAGGCCGCCGCGGCTCCGATCTGGGAGGGGGAGGTCGAGATGGTGCCCAGGGACAGGGTGAATGCCGCTGCCGCTGGTGGCGGCGGCGAGGGGAGGCTGGTCCAGAGCGGTATAGTGAACAAGAAGTGTGATAAGAAGGCTCCAAAGAGAATCCATAAATCAGAGAGGGAGAAACTTAAGCGGGACAAGCAGAATGACCTCTTTAATGAGCTGGGAAACTTGCTAGAACCTGACAGGCAGAACAATGGGAAGGCATGTGTACTGGGTGAAACTACACGAATACTAAAAGATTTACTTTCACAAGTGGAATCTCTCCGGAAGGAGAATAGTTCACTGAAGAATGAATCTCATTATGTTGCATTGGAGAGAAATGAACTGCACGACGATAACAGCATGCTTCGTACTGAAATCTTGGAGCTTCAAAACGAGCTTAGGACGCGGATGGAAGGCAATCCTGTTTGGAGTCATGTAAACACCAGACCAGCTCTCAGGGTACCTTATCCGACAACCGGAGTGTTCCCAGTACAGCACCTGCCACATTTACCAGTCACCACGACGGCAGCATTTCCTCAGCAGCTACCGGTTATCATCGAGCAGCACTATGCCGCCACGCCAAGAGAACTTCAGCTCTTCCCTGAGTCTGCGACCAGCGAAGACAGCGAACCGTCACAAGAACACGGGATTTCTGACCATGTAACACGGCCTCAGCCAAGGTACCCAACACCAACGGCCACTTTGCCAGTAAACCTGTTTCCAGTGTTTCCAGGAAGACAAGATCAACAATGTAGCAGTGGTACTTCTGGCACTAACGAGGAAGACCGTATAGGTAGATCTTAGGTACACTACATAACGAGAGGTCCACACAATGATTTGAGAATTCCTTTAGTTTCAACGTTTAACTTTGCAAGTTTAGCAAATGTGAAACAGAGATCTGCGACTGTGCTCATGGGTAGCACCTAATCTGTATATCTGAATCTCAGTTTTAAGTGGTCAAATAGGTGACATTCAGAAAAGTTTGAAATGCTTTGATTATTCTGTA
CDS Sequence
- >LOC_Os07g43530.1 CDS ATGGTGCCCAGGGACAGGGTGAATGCCGCTGCCGCTGGTGGCGGCGGCGAGGGGAGGCTGGTCCAGAGCGGTATAGTGAACAAGAAGTGTGATAAGAAGGCTCCAAAGAGAATCCATAAATCAGAGAGGGAGAAACTTAAGCGGGACAAGCAGAATGACCTCTTTAATGAGCTGGGAAACTTGCTAGAACCTGACAGGCAGAACAATGGGAAGGCATGTGTACTGGGTGAAACTACACGAATACTAAAAGATTTACTTTCACAAGTGGAATCTCTCCGGAAGGAGAATAGTTCACTGAAGAATGAATCTCATTATGTTGCATTGGAGAGAAATGAACTGCACGACGATAACAGCATGCTTCGTACTGAAATCTTGGAGCTTCAAAACGAGCTTAGGACGCGGATGGAAGGCAATCCTGTTTGGAGTCATGTAAACACCAGACCAGCTCTCAGGGTACCTTATCCGACAACCGGAGTGTTCCCAGTACAGCACCTGCCACATTTACCAGTCACCACGACGGCAGCATTTCCTCAGCAGCTACCGGTTATCATCGAGCAGCACTATGCCGCCACGCCAAGAGAACTTCAGCTCTTCCCTGAGTCTGCGACCAGCGAAGACAGCGAACCGTCACAAGAACACGGGATTTCTGACCATGTAACACGGCCTCAGCCAAGGTACCCAACACCAACGGCCACTTTGCCAGTAAACCTGTTTCCAGTGTTTCCAGGAAGACAAGATCAACAATGTAGCAGTGGTACTTCTGGCACTAACGAGGAAGACCGTATAGGTAGATCTTAG
- >LOC_Os07g43530.2 CDS ATGGTGCCCAGGGACAGGGTGAATGCCGCTGCCGCTGGTGGCGGCGGCGAGGGGAGGCTGGTCCAGAGCGGTATAGTGAACAAGAAGTGTGATAAGAAGGCTCCAAAGAGAATCCATAAATCAGAGAGGGAGAAACTTAAGCGGGACAAGCAGAATGACCTCTTTAATGAGCTGGGAAACTTGCTAGAACCTGACAGGCAGAACAATGGGAAGGCATGTGTACTGGGTGAAACTACACGAATACTAAAAGATTTACTTTCACAAGTGGAATCTCTCCGGAAGGAGAATAGTTCACTGAAGAATGAATCTCATTATGTTGCATTGGAGAGAAATGAACTGCACGACGATAACAGCATGCTTCGTACTGAAATCTTGGAGCTTCAAAACGAGCTTAGGACGCGGATGGAAGGCAATCCTGTTTGGAGTCATGTAAACACCAGACCAGCTCTCAGGGTACCTTATCCGACAACCGGAGTGTTCCCAGTACAGCACCTGCCACATTTACCAGTCACCACGACGGCAGCATTTCCTCAGCAGCTACCGGTTATCATCGAGCAGCACTATGCCGCCACGCCAAGAGAACTTCAGCTCTTCCCTGAGTCTGCGACCAGCGAAGACAGCGAACCGTCACAAGAACACGGGATTTCTGACCATGTAACACGGCCTCAGCCAAGGTACCCAACACCAACGGCCACTTTGCCAGTAAACCTGTTTCCAGTGTTTCCAGGAAGACAAGATCAACAATGTAGCAGTGGTACTTCTGGCACTAACGAGGAAGACCGTATAGGTAGATCTTAG
Protein Sequence
- >LOC_Os07g43530.1 protein MVPRDRVNAAAAGGGGEGRLVQSGIVNKKCDKKAPKRIHKSEREKLKRDKQNDLFNELGNLLEPDRQNNGKACVLGETTRILKDLLSQVESLRKENSSLKNESHYVALERNELHDDNSMLRTEILELQNELRTRMEGNPVWSHVNTRPALRVPYPTTGVFPVQHLPHLPVTTTAAFPQQLPVIIEQHYAATPRELQLFPESATSEDSEPSQEHGISDHVTRPQPRYPTPTATLPVNLFPVFPGRQDQQCSSGTSGTNEEDRIGRS*
- >LOC_Os07g43530.2 protein MVPRDRVNAAAAGGGGEGRLVQSGIVNKKCDKKAPKRIHKSEREKLKRDKQNDLFNELGNLLEPDRQNNGKACVLGETTRILKDLLSQVESLRKENSSLKNESHYVALERNELHDDNSMLRTEILELQNELRTRMEGNPVWSHVNTRPALRVPYPTTGVFPVQHLPHLPVTTTAAFPQQLPVIIEQHYAATPRELQLFPESATSEDSEPSQEHGISDHVTRPQPRYPTPTATLPVNLFPVFPGRQDQQCSSGTSGTNEEDRIGRS*