Gene Details:
- MSU gene ID: LOC_Os07g47670
- RAPdb gene ID: Os07g0673900
- Gene Symbol: OsHIGD2
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Transient expression of OsHIGD2 in leaf epidermal cells of Nicotiana benthamiana provided evidence that the protein is localized to mitochondria.
- Among the genes, OsHIGD2 showed the fastest and strongest induction by hypoxia as well as submergence.
Function-related keywords:
Literature:
- A novel rice protein family of OsHIGDs may be involved in early signalling of hypoxia-promoted stem growth in deepwater rice . DOI: 10.1007/s00299-016-2013-z ; PMID: 27306456
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os07g47670.2 cDNA GCGAGCCGCGTGTGCGCTCGAAACCATCTCCGCCACCGCCACCGCGACAGAGGCACGGGTCGCCACGTACGTTCGCAGCTCGCGCTGCCGGATTCCTGCCGCGTCATCGTGCAGCGGCTGCCACCTGAGCAGTGCCACCACCACGGCCGTTTCCCAGGCACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCGTCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCCTCACACTGGCTGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAAGCAGTTCATCACACCTGAGAGCAACCCACAAAAAGAATAGAGGACGTTGTGTACTTAATCAACGCCAGATGTATCGATATGATTTCCTACGCACAAATTCTGTGGCGTCTGAATCTCCTACGTACTGTCTGTTTTCCCTTCTCTGCCTGCTTTCTGTATAAGCTAAGCTGCTGAACTAACATTCAGGGTTTCAGACGCTGCGATATCGATGATGAATGATAATGAACTGGCATCAGCTGTGTAATGTAATACATTTGTTGTTTCTTGTCAAGACGAATCAAATGTTCTGATTTTCTATATGTGTGTAACTATTGAGGCTTTTTTTTAAATCACTATTGAGGC
- >LOC_Os07g47670.1 cDNA GCGAGCCGCGTGTGCGCTCGAAACCATCTCCGCCACCGCCACCGCGACAGAGGCACGGGTCGCCACGTACGTTCGCAGCTCGCGCTGCCGGATTCCTGCCGCGTCATCGTGCAGCGGCTGCCACCTGAGCAGTGCCACCACCACGGCCGTTTCCCAGGCACAAACAGATCGGGCACCGGAGAGGTTGGGAGGAGAGCTTGGGTTGGCCTGACGAAATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCGTCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCCTCACACTGGCTGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAAGCAGTTCATCACACCTGAGAGCAACCCACAAAAAGAATAGAGGACGTTGTGTACTTAATCAACGCCAGATGTATCGATATGATTTCCTACGCACAAATTCTGTGGCGTCTGAATCTCCTACGTACTGTCTGTTTTCCCTTCTCTGCCTGCTTTCTGTATAAGCTAAGCTGCTGAACTAACATTCAGGGTTTCAGACGCTGCGATATCGATGATGAATGATAATGAACTGGCATCAGCTGTGTAATGTAATACATTTGTTGTTTCTTGTCAAGACGAATCAAATGTTCTGATTTTCTATATGTGTGTAACTATTGAGGCTTTTTTTTAAATCACTATTGAGGC
CDS Sequence
- >LOC_Os07g47670.2 CDS ATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCGTCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCCTCACACTGGCTGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAAGCAGTTCATCACACCTGAGAGCAACCCACAAAAAGAATAG
- >LOC_Os07g47670.1 CDS ATGGCGGAGGAGAAGAGCACGATGCAGTCGATGAGGGAGTGGGTCGTCGACCACAAGCTCCGGGCCGTCGGGACGCTGTGGCTGACTGGGGTGGCGAGCTCGATCGCGTACAACTGGTCGAGGCCCGGCATGAAGACCAGCGTCAAGATCATCCACGCCAGGTTGCATGCTCAGGCCCTCACACTGGCTGCATTGGCTGGCTCTGCACTGGTGGAGTACTACGACCATCGGTCAGGTTCAGGATCAAGAGTTCATCAGTATGCGAAGCAGTTCATCACACCTGAGAGCAACCCACAAAAAGAATAG
Protein Sequence
- >LOC_Os07g47670.2 protein MAEEKSTMQSMREWVVDHKLRAVGTLWLTGVASSIAYNWSRPGMKTSVKIIHARLHAQALTLAALAGSALVEYYDHRSGSGSRVHQYAKQFITPESNPQKE*
- >LOC_Os07g47670.1 protein MAEEKSTMQSMREWVVDHKLRAVGTLWLTGVASSIAYNWSRPGMKTSVKIIHARLHAQALTLAALAGSALVEYYDHRSGSGSRVHQYAKQFITPESNPQKE*