Gene Details:
- MSU gene ID: LOC_Os07g47830
- RAPdb gene ID: Os07g0675100
- Gene Symbol: PME40
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Knockout of PME40 also resulted in early diurnal flower opening, whereas overexpression of PME42 delayed diurnal flower opening.
Function-related keywords:
Literature:
- Methylesterification of cell-wall pectin controls the diurnal flower-opening times in rice . DOI: 10.1016/j.molp.2022.04.004 ; PMID: 35418344
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os07g47830.1 cDNA ACTCACACTAGCACACTGTCAGTCCTTGTCACGTTTGCTACGGCCATCCCGTCCAATCCACCGCAGAAACGCCAATGCCACCTCCAAGAACCAAGCACCGGCCGCTTCTCCTCGCCACCACCTTCCTCTCCCTTCTGCTGCTGCTGCTGCTGCTCAGCTTGCTCTCCACCGCGCACAAGGCATTCGCCGTCGCTGACGACGACGGCCACCGCGCGCGCGTGCTTCTTGCAGCAGACGGCGGCGAGAGGAATGCCGATGCCGAGCACGCGGCCGCCGTGGACCGGCATTGCGCCGGGACGCTCCACCGGGACGTCTGCGTGTCGACGCTGTCCACCATCCCGAACCTCGCGCGGAAGCCGCTCCGGGACGTGATCTCCGAGGTCGTGGGGCGCGCCGCGTCGGCGGTGCGCGCGTCGTCGTCCAACTGCACGTCCTACCTCCAGCGGCCGCGGCAGCTGCGCACGCGCGACCGCCTCGCGCTGTCCGACTGCCTCGAGCTGTTCGGGCACACGCTGGACCTGCTGGGCACGGCGGCCGCGGAGCTCTCCGCCGGGAACAGCACCGCCGAGGAGTCCGCCGCCGGCGTGCAGACCGTGCTGTCGGCGGCGATGACGAACCAGTACACCTGCCTCGACGGGTTCGCCGGGCCGTCCGCCTCGGAGGACGGGCGCGTCCGGCCGTTCATCCAGGGCCGCATCTACCACGTCGCCCACCTGGTCTCCAACTCGCTCGCCATGGTGCGGCGCCTCCCGACCCAGCGGCGGCGCGGGGCGGAGGAGGAGCCATTGGAAGGGTACGGCCGCGTGCGACGCGGGTTCCCGTCGTGGGTGTCGGCGTCGGACCGGAGGCGGCTGCAGCAGCAGGTGGCGGCGGACGTGGTGGTGGCGAAGGACGGGAGCGGGAAGTTCACGACGGTGAGCGAGGCGGTGGCGGCGGCGCCGAACAACAGCGAGACGCGGTACGTGATATACATCAAGGCCGGCGGGTACTTCGAGAACGTGGAGGTCGGGAGCGAGAAGACCAACATCATGTTCGTCGGCGACGGCACGTGGAAGACCGTCATCAAGGCCAGCCGCAACGTCGTCGACAACTCCACCACCTTCCGCTCTGCCACGCTCGCCGTGGTGGGCACGGGGTTTCTGGCGCGGGACATAACGGTGGAGAACGCGGCGGGGCCGAGCAAGCACCAGGCGGTGGCGCTGCGGGTGAACGCCGACCTGTCGGCGTTCTACCGGTGCAGCTTCGCGGGCTACCAGGACACGCTGTACGCGCACTCGCTTCGCCAGTTCTACCGCGACTGCGACATCTACGGCACGGTGGACTTCATCTTCGGCGACGCCGCCGTCGTGCTCCAGAACTGCAACCTCTACGCGCGCCGCCCGGACCCCAACCAGAAGAATGTGTTCACGGCGCAGGGCCGGGAGGACCCCAACCAGAACACCGGCATCGCCATCCAGGGCTGCAAGGTCGCCGCCGCCGCCGACCTCGTCCCCGTCCAGGCCAACTTCTCCTCCTACCTCGGCCGCCCGTGGAAGACCTACTCGCGCACGGTGTTCCTGCAGTCCAAGATCGACAGCCTGATACACCCCAGGGGGTGGCTCGAGTGGAACGGCAGCTTCGCGCTCGACACGCTCTACTACGCCGAGTACATGAACCGCGGCGACGGCGCCGACACGTCGGCGAGGGTGTCGTGGCCGGGGTACCACGTGCTCACCAACGCCACCGACGCGGCCAACTTCACCGTGCTCAACTTCGTGCAGGGTGACCTCTGGCTCAACTCCAGCTCGTTCCCCTACATCTTGGGGTTGAGCTGAAAGTGGTGGCTTCTGGACAGTCTCTGGAGATGGGGATTTTTGGGTCTTATACTGGTTTTGGTCCTTTTTGGAATAAGAGTAGCTCATCACAGGTTTAAGATAATTTGTAGTAAACCTGGAGCTACCACCAGGCCATCACCACCAAGTGTTTTGTTACGAGGGTTGAAGCCTACAATGGCCGAAGGCTAATCATTGGAAGGGGATAGGTTCATTGCTTCTGAGCTCTTATTCGTCTCTGCTGTACAACAAGGTACGGTTGTTTGTTGGTGTCGAATTATGGACAGATGACAGTGCAATAGCTAACAGTTGAAGTAATACCCGCAGTACAACATCCACAAATTTCACGCCACATATCAACCATTCTATACAAGTGACAACTATCGTAGTGTCATTTCCAATTTCGTTCAATAAAAACGGGGACATGTTACACAACGATTTCCCTCTCCCCTAGTATTTATTATTCATGAAATCTGGGCGGCATCCTGATGACGCGAGACTACATCCTTGCTCTTTGCAGCTCCAGCTTAGCGATTGTCCCAAGATGAACTTCATCAGGGCCGTCGGCGATCCTCAGTGTCCTAGCAGTTGCCCATAGATGTGATAGAACTGTGTCTGATGAGAGACCAGCACCACCATGAACTTGCATTGCCATGTCAAGCACTTTCAGGGCCATATTTGGAGCTGCCACCT
CDS Sequence
- >LOC_Os07g47830.1 CDS ATGCCACCTCCAAGAACCAAGCACCGGCCGCTTCTCCTCGCCACCACCTTCCTCTCCCTTCTGCTGCTGCTGCTGCTGCTCAGCTTGCTCTCCACCGCGCACAAGGCATTCGCCGTCGCTGACGACGACGGCCACCGCGCGCGCGTGCTTCTTGCAGCAGACGGCGGCGAGAGGAATGCCGATGCCGAGCACGCGGCCGCCGTGGACCGGCATTGCGCCGGGACGCTCCACCGGGACGTCTGCGTGTCGACGCTGTCCACCATCCCGAACCTCGCGCGGAAGCCGCTCCGGGACGTGATCTCCGAGGTCGTGGGGCGCGCCGCGTCGGCGGTGCGCGCGTCGTCGTCCAACTGCACGTCCTACCTCCAGCGGCCGCGGCAGCTGCGCACGCGCGACCGCCTCGCGCTGTCCGACTGCCTCGAGCTGTTCGGGCACACGCTGGACCTGCTGGGCACGGCGGCCGCGGAGCTCTCCGCCGGGAACAGCACCGCCGAGGAGTCCGCCGCCGGCGTGCAGACCGTGCTGTCGGCGGCGATGACGAACCAGTACACCTGCCTCGACGGGTTCGCCGGGCCGTCCGCCTCGGAGGACGGGCGCGTCCGGCCGTTCATCCAGGGCCGCATCTACCACGTCGCCCACCTGGTCTCCAACTCGCTCGCCATGGTGCGGCGCCTCCCGACCCAGCGGCGGCGCGGGGCGGAGGAGGAGCCATTGGAAGGGTACGGCCGCGTGCGACGCGGGTTCCCGTCGTGGGTGTCGGCGTCGGACCGGAGGCGGCTGCAGCAGCAGGTGGCGGCGGACGTGGTGGTGGCGAAGGACGGGAGCGGGAAGTTCACGACGGTGAGCGAGGCGGTGGCGGCGGCGCCGAACAACAGCGAGACGCGGTACGTGATATACATCAAGGCCGGCGGGTACTTCGAGAACGTGGAGGTCGGGAGCGAGAAGACCAACATCATGTTCGTCGGCGACGGCACGTGGAAGACCGTCATCAAGGCCAGCCGCAACGTCGTCGACAACTCCACCACCTTCCGCTCTGCCACGCTCGCCGTGGTGGGCACGGGGTTTCTGGCGCGGGACATAACGGTGGAGAACGCGGCGGGGCCGAGCAAGCACCAGGCGGTGGCGCTGCGGGTGAACGCCGACCTGTCGGCGTTCTACCGGTGCAGCTTCGCGGGCTACCAGGACACGCTGTACGCGCACTCGCTTCGCCAGTTCTACCGCGACTGCGACATCTACGGCACGGTGGACTTCATCTTCGGCGACGCCGCCGTCGTGCTCCAGAACTGCAACCTCTACGCGCGCCGCCCGGACCCCAACCAGAAGAATGTGTTCACGGCGCAGGGCCGGGAGGACCCCAACCAGAACACCGGCATCGCCATCCAGGGCTGCAAGGTCGCCGCCGCCGCCGACCTCGTCCCCGTCCAGGCCAACTTCTCCTCCTACCTCGGCCGCCCGTGGAAGACCTACTCGCGCACGGTGTTCCTGCAGTCCAAGATCGACAGCCTGATACACCCCAGGGGGTGGCTCGAGTGGAACGGCAGCTTCGCGCTCGACACGCTCTACTACGCCGAGTACATGAACCGCGGCGACGGCGCCGACACGTCGGCGAGGGTGTCGTGGCCGGGGTACCACGTGCTCACCAACGCCACCGACGCGGCCAACTTCACCGTGCTCAACTTCGTGCAGGGTGACCTCTGGCTCAACTCCAGCTCGTTCCCCTACATCTTGGGGTTGAGCTGA
Protein Sequence
- >LOC_Os07g47830.1 protein MPPPRTKHRPLLLATTFLSLLLLLLLLSLLSTAHKAFAVADDDGHRARVLLAADGGERNADAEHAAAVDRHCAGTLHRDVCVSTLSTIPNLARKPLRDVISEVVGRAASAVRASSSNCTSYLQRPRQLRTRDRLALSDCLELFGHTLDLLGTAAAELSAGNSTAEESAAGVQTVLSAAMTNQYTCLDGFAGPSASEDGRVRPFIQGRIYHVAHLVSNSLAMVRRLPTQRRRGAEEEPLEGYGRVRRGFPSWVSASDRRRLQQQVAADVVVAKDGSGKFTTVSEAVAAAPNNSETRYVIYIKAGGYFENVEVGSEKTNIMFVGDGTWKTVIKASRNVVDNSTTFRSATLAVVGTGFLARDITVENAAGPSKHQAVALRVNADLSAFYRCSFAGYQDTLYAHSLRQFYRDCDIYGTVDFIFGDAAVVLQNCNLYARRPDPNQKNVFTAQGREDPNQNTGIAIQGCKVAAAADLVPVQANFSSYLGRPWKTYSRTVFLQSKIDSLIHPRGWLEWNGSFALDTLYYAEYMNRGDGADTSARVSWPGYHVLTNATDAANFTVLNFVQGDLWLNSSSFPYILGLS*