Gene Details:
- MSU gene ID: LOC_Os08g04440
- RAPdb gene ID: Os08g0139000
- Gene Symbol: OsDEG10
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- OsDEG10 RNAi transgenic plants were more sensitive to high light and cold stresses compared to wild-type plants.
- Among them, OsDEG10 is predicted to encode a small RNA-binding protein (RBP) and the transcript levels of OsDEG10 strongly increased under most of abiotic stress treatments such as high light, anoxia, NaCl, ABA, MV and cold.
- Our results suggest that OsDEG10 is a small RBP involved in the response to various abiotic stresses.
- OsDEG10 encoding a small RNA-binding protein is involved in abiotic stress signaling.
Function-related keywords:
Literature:
- OsDEG10 encoding a small RNA-binding protein is involved in abiotic stress signaling . DOI: 10.1016/j.bbrc.2009.01.131 ; PMID: 19285007
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os08g04440.2 cDNA CCCTAGCTTCTCACCTCACCTTCGAAATCCGGCGGCGGCGATGGCGGCGGCGGCTACGGCGAGGTCCGGATTCCGGCGCATGTTCTCCATCTCGGCCTTCTCCCCGCCCAAGCCGCCCACCCCGCCCCCGAAGGCCGACCCCTCCCCCAACCTCTTCATCTCAGGCTTAAGCAAGCGTACAACAACAGATGGGCTTAAAGAAGCTTTTGCAAAGTTTGGGGAAGTCATACATGCTCGAGTTGTCACAGATCGTGTCACTGGATTCTCTAAGGGGTTTGGCTTCGTAAGGTATGCTACAGTTGAGGATGCAGCTAAAGGAATAGAAGGAATGGATGGAAAGGTATGTTTCATACTTTCATATCATTTTTGTTGTTAGGATTTGTTGTTTTTTCCTCAATTCTCTTGTGTTGAACTCTCACTGTTTATATAATGATCAGTTCCCATGATGCAATAAGCAGAATATATGACCTTACCTCTCTACTTGTTATGCCTCATTTTAAAAATTTTAATACAAGAACTGCCTAATTTCACTGGCTGCCACTGGAAAGGCGGAAACAGTAAGAAAGCTAGTTTTGTATTGGAGCATAGGCAGTTAATATATACACAGAATTGATTTGATTATGTGGAATTCAGAGAAAGCAGGACAAGTTGGAGAGGTAGGTAGAGCCCAGGGAGCCTGCTTAGGCACCCTTTGTCAACAGACTATTTCAAACTAAATATGTTGTAGAATTATTCAGGTATCTCATTTTGACAGTACCGAAGTATAGATATTTGCATCCTAGTTGACCAGAAACTGTGAGCGTATGTTCGTTGTGCAATACTATAGTAGTACTATTTAATAACTTGGACATGCTATGGGGTGGACATCATAGGCATCACATTTTTCTGGACATTTTATCCTGAGATTGAAATTGAGAGCATCGTGGTCACTCAGGTTTACTCTTTGTGTTTTGCACAAGCAGACAGGGCATGTGTTACCACTTTTCAAGTTCATGTGTAAGTTTTTTTTATTATGATATTGGTAGCACAATTTGCTAACTACCTAAGGTCTCACCACAATTCAACTCTGATATATTTTGCACACATTCTTTCTTGTTGTGCTCATCTCTGAAGAACAAAAATGCAAAAAAAAATGTTCATTATTTTAAAAATAATTATGTGTGAATAATCCAGAATTACTATGTGCAAGATTCTTAAGAACACAGATATCAGCCTCATGCACTCATTTCATATAGCTTGTATTGTGCTAGATGCTGGATATCTTGATAAATTTCTGTGGTAATTTTTAAGGTATACGCTAACCTTTTAATGCTCAAGTATAATAGTTACATTGTTTTCTTACATGTTATCGCTGTGACTTGTGACTTGTGTTGCTTCGTTGCAACTGGCAAATCATGAACCGTACTCAGACATGCTTGGACTGATTTCTTCAACAAAAATCGTGAACTGGTGGTTCTGCACTGTCTTTAGAATCTTAATACAAATTTGCATTCTGGTATCTTGTTTTTATTTTTGCTTTATATTTAGATACTAAAATATTTTACTCTGTATGTTTCCTCATTAGCAATGATACTCCATATTTTTCTTAATTCATTCTTGAATTCTTGTGGCACCAAAGCAATACTTCACACATAATGTAAGAAAATTACGTATGTGATACACTAACTATTGCCCACATGACCCTCATGCTATAATTTATGCTTTCTTGAATGGCTGAGCTCTCAATTATTTATTTATTTTTTCAGTCTACTAATTTCTACCATAGTGAAAATAAAATGAAGCGTTTATTTGGTGTGGTTAGATACTCTGAAAGCAACTGGTGAAAATATCATTGACCATTTTGGGCTTCTTTTTAGAGCCTTGCTGCAGTATATCATAATGCACAGGTTTTTTCTGATATATCTCTGCTTCTATGCAGTTTCTCGATGGATGGGTTATTTTTGCTGAATATGCTAGACCCAGAACACCACCGCAGCAACCAGAAATGAACTCACAGCCACAACAATCATGGGGCCCTCCATCCAGTTCCTGGGGTGCACAGTAGATGAAGATACAATCTTGGGGCCCTCTATCTGGCCGTGGGGCTCACAGCGGATCGACAAGTTATTGATTCTATATTTAGTTTATCGCTATACCATATTGTTCCAGGTGTGAACAGAGTTTCCGATCCAATATTCTTATCGTGTTGGAGTGGTCGTTTGCTTGCATCCCATGGTTTCCGCATGGAGAAGCACTTGTCAAACTGAATATGGACCAAACAATATTACTATCAACGCGCAACAGGACACGAACAGCTTCAAACCTTTGCTAATAATGACCCCCATGTCTTGCTTGTCCTGACTCATGAGGTGCTGGTTGTGTTGGAGTCACCCTTTCATTTGAATTGTCGTAGCCCTTATCAGCTGGTGGCATGTGCTGCTCATGTACTGGATAATGACTCGTTGCTCAGAATAACACGTTTATACATGACAAGGTACAACTGAATTTTCCTTGATCAAAATCCTGATCTGCTGACAGCGACGGTGAAGCTGATCTGTGCAGAGTGCAATTCATTCGTGATCAACAGTGCATGCACTTGTTACATATTGCGCTCTGTTCTTGTACTTCATTTGATTTTGCAATTATCCTTTTCTTGC
- >LOC_Os08g04440.1 cDNA CCCTAGCTTCTCACCTCACCTTCGAAATCCGGCGGCGGCGATGGCGGCGGCGGCTACGGCGAGGTCCGGATTCCGGCGCATGTTCTCCATCTCGGCCTTCTCCCCGCCCAAGCCGCCCACCCCGCCCCCGAAGGCCGACCCCTCCCCCAACCTCTTCATCTCAGGCTTAAGCAAGCGTACAACAACAGATGGGCTTAAAGAAGCTTTTGCAAAGTTTGGGGAAGTCATACATGCTCGAGTTGTCACAGATCGTGTCACTGGATTCTCTAAGGGGTTTGGCTTCGTAAGGTATGCTACAGTTGAGGATGCAGCTAAAGGAATAGAAGGAATGGATGGAAAGGTATGTTTCATACTTTCATATCATTTTTGTTGTTAGGATTTGTTGTTTTTTCCTCAATTCTCTTGTGTTGAACTCTCACTGTTTATATAATGATCAGTTCCCATGATGCAATAAGCAGAATATATGACCTTACCTCTCTACTTGTTATGCCTCATTTTAAAAATTTTAATACAAGAACTGCCTAATTTCACTGGCTGCCACTGGAAAGGCGGAAACAGTAAGAAAGCTAGTTTTGTATTGGAGCATAGGCAGTTAATATATACACAGAATTGATTTGATTATGTGGAATTCAGAGAAAGCAGGACAAGTTGGAGAGGTAGGTAGAGCCCAGGGAGCCTGCTTAGGCACCCTTTGTCAACAGACTATTTCAAACTAAATATGTTGTAGAATTATTCAGGTATCTCATTTTGACAGTACCGAAGTATAGATATTTGCATCCTAGTTGACCAGAAACTGTGAGCGTATGTTCGTTGTGCAATACTATAGTAGTACTATTTAATAACTTGGACATGCTATGGGGTGGACATCATAGGCATCACATTTTTCTGGACATTTTATCCTGAGATTGAAATTGAGAGCATCGTGGTCACTCAGGTTTACTCTTTGTGTTTTGCACAAGCAGACAGGGCATGTGTTACCACTTTTCAAGTTCATGTGTAAGTTTTTTTTATTATGATATTGGTAGCACAATTTGCTAACTACCTAAGGTCTCACCACAATTCAACTCTGATATATTTTGCACACATTCTTTCTTGTTGTGCTCATCTCTGAAGAACAAAAATGCAAAAAAAAATGTTCATTATTTTAAAAATAATTATGTGTGAATAATCCAGAATTACTATGTGCAAGATTCTTAAGAACACAGATATCAGCCTCATGCACTCATTTCATATAGCTTGTATTGTGCTAGATGCTGGATATCTTGATAAATTTCTGTGGTAATTTTTAAGGTATACGCTAACCTTTTAATGCTCAAGTATAATAGTTACATTGTTTTCTTACATGTTATCGCTGTGACTTGTGACTTGTGTTGCTTCGTTGCAACTGGCAAATCATGAACCGTACTCAGACATGCTTGGACTGATTTCTTCAACAAAAATCGTGAACTGGTGGTTCTGCACTGTCTTTAGAATCTTAATACAAATTTGCATTCTGGTATCTTGTTTTTATTTTTGCTTTATATTTAGATACTAAAATATTTTACTCTGTATGTTTCCTCATTAGCAATGATACTCCATATTTTTCTTAATTCATTCTTGAATTCTTGTGGCACCAAAGCAATACTTCACACATAATGTAAGAAAATTACGTATGTGATACACTAACTATTGCCCACATGACCCTCATGCTATAATTTATGCTTTCTTGAATGGCTGAGCTCTCAATTATTTATTTATTTTTTCAGTCTACTAATTTCTACCATAGTGAAAATAAAATGAAGCGTTTATTTGGTGTGGTTAGATACTCTGAAAGCAACTGGTGAAAATATCATTGACCATTTTGGGCTTCTTTTTAGAGCCTTGCTGCAGTATATCATAATGCACAGGTTTTTTCTGATATATCTCTGCTTCTATGCAGTTTCTCGATGGATGGGTTATTTTTGCTGAATATGCTAGACCCAGAACACCACCGCAGCAACCAGAAATGAACTCACAGCCACAACAATCATGGGGCCCTCCATCCAGTTCCTGGGGTGCACAGTAGATGAAGATACAATCTTGGGGCCCTCTATCTGGCCGTGGGGCTCACAGCGGATCGACAAGTTATTGATTCTATATTTAGTTTATCGCTATACCATATTGTTCCAGGTGTGAACAGAGTTTCCGATCCAATATTCTTATCGTGTTGGAGTGGTCGTTTGCTTGCATCCCATGGTTTCCGCATGGAGAAGCACTTGTCAAACTGAATATGGACCAAACAATATTACTATCAACGCGCAACAGGACACGAACAGCTTCAAACCTTTGCTAATAATGACCCCCATGTCTTGCTTGTCCTGACTCATGAGGTGCTGGTTGTGTTGGAGTCACCCTTTCATTTGAATTGTCGTAGCCCTTATCAGCTGGTGGCATGTGCTGCTCATGTACTGGATAATGACTCGTTGCTCAGAATAACACGTTTATACATGACAAGGTACAACTGAATTTTCCTTGATCAAAATCCTGATCTGCTGACAGCGACGGTGAAGCTGATCTGTGCAGAGTGCAATTCATTCGTGATCAACAGTGCATGCACTTGTTACATATTGCGCTCTGTTCTTGTACTTCATTTGATTTTGCAATTATCCTTTTCTTGC
CDS Sequence
- >LOC_Os08g04440.2 CDS ATGGCGGCGGCGGCTACGGCGAGGTCCGGATTCCGGCGCATGTTCTCCATCTCGGCCTTCTCCCCGCCCAAGCCGCCCACCCCGCCCCCGAAGGCCGACCCCTCCCCCAACCTCTTCATCTCAGGCTTAAGCAAGCGTACAACAACAGATGGGCTTAAAGAAGCTTTTGCAAAGTTTGGGGAAGTCATACATGCTCGAGTTGTCACAGATCGTGTCACTGGATTCTCTAAGGGGTTTGGCTTCGTAAGGTATGCTACAGTTGAGGATGCAGCTAAAGGAATAGAAGGAATGGATGGAAAGGTATGTTTCATACTTTCATATCATTTTTGTTGTTAG
- >LOC_Os08g04440.1 CDS ATGGCGGCGGCGGCTACGGCGAGGTCCGGATTCCGGCGCATGTTCTCCATCTCGGCCTTCTCCCCGCCCAAGCCGCCCACCCCGCCCCCGAAGGCCGACCCCTCCCCCAACCTCTTCATCTCAGGCTTAAGCAAGCGTACAACAACAGATGGGCTTAAAGAAGCTTTTGCAAAGTTTGGGGAAGTCATACATGCTCGAGTTGTCACAGATCGTGTCACTGGATTCTCTAAGGGGTTTGGCTTCGTAAGGTATGCTACAGTTGAGGATGCAGCTAAAGGAATAGAAGGAATGGATGGAAAGGTATGTTTCATACTTTCATATCATTTTTGTTGTTAG
Protein Sequence
- >LOC_Os08g04440.2 protein MAAAATARSGFRRMFSISAFSPPKPPTPPPKADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEGMDGKVCFILSYHFCC*
- >LOC_Os08g04440.1 protein MAAAATARSGFRRMFSISAFSPPKPPTPPPKADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEGMDGKVCFILSYHFCC*