Gene Details:
- MSU gene ID: LOC_Os08g04540
- RAPdb gene ID: Os08g0140300
- Gene Symbol: TDC1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Senescence-induced serotonin biosynthesis and its role in delaying senescence in rice leaves . DOI: 10.1104/pp.109.138552 ; PMID: 19439571
- Serotonin accumulation in transgenic rice by over-expressing tryptophan decarboxylase results in a dark brown phenotype and stunted growth . DOI: 10.1007/s11103-012-9882-5 ; PMID: 22297847
Related News:
Gene Resources:
- NCBI ID: AK069031
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os08g04540.1 cDNA AAACCAACACACCAACCTAGCTAACTCACTCACTCACTCCTTCTTCTTGCGACCTAGCTATCGAGCTAGAGCTTCCAAAACCCTAGCTAGCTAGCTGAGACAGTTAGTTTCATCTCGAACTAGTTGTTGATATGGGCAGCTTGGACACCAACCCCACGGCCTTCTCCGCCTTCCCCGCCGGCGAGGGTGAAACCTTCCAGCCGCTCAACGCCGATGATGTCCGGTCCTACCTCCACAAGGCGGTGGACTTCATCTCGGACTACTACAAGTCCGTGGAGTCCATGCCGGTGCTGCCCAATGTCAAGCCGGGGTACCTGCAGGACGAGCTCAGGGCCTCGCCGCCGACGTACTCGGCGCCGTTCGACGTCACCATGAAGGAGCTCCGGAGCTCCGTCGTCCCCGGGATGACGCACTGGGCGAGCCCCAACTTCTTCGCGTTTTTCCCCTCCACGAATAGTGCGGCCGCCATTGCCGGCGACCTCATCGCGTCGGCGATGAACACGGTCGGGTTCACGTGGCAGGCGTCGCCGGCGGCCACCGAGATGGAGGTGCTCGCGCTGGACTGGCTCGCGCAGATGCTCAACCTGCCGACGAGCTTCATGAACCGCACCGGCGAGGGGCGTGGCACCGGCGGTGGGGTTATTCTGGGGACGACCAGCGAGGCGATGCTCGTCACGCTCGTTGCCGCGCGCGACGCCGCGCTGCGGCGGAGCGGCAGCGACGGCGTGGCGGGACTCCACCGGCTCGCCGTGTACGCCGCCGACCAGACGCACTCCACGTTCTTCAAGGCGTGCCGCCTCGCCGGGTTTGATCCGGCGAACATCCGGTCGATCCCCACCGGGGCCGAGACCGACTACGGCCTCGACCCGGCGAGGCTGCTGGAGGCGATGCAGGCCGACGCCGACGCCGGGCTGGTGCCCACCTACGTGTGCGCCACGGTGGGCACCACGTCGTCCAACGCCGTCGACCCGGTGGGCGCCGTGGCCGACGTCGCGGCGAGGTTCGCCGCGTGGGTGCACGTCGACGCGGCGTACGCCGGCAGCGCGTGCATCTGCCCGGAGTTCAGGCACCACCTCGACGGCGTGGAGCGCGTGGACTCCATCAGCATGAGCCCCCACAAATGGCTGATGACCTGCCTCGACTGCACCTGCCTCTACGTGCGCGACACCCACCGCCTCACCGGCTCCCTCGAGACCAACCCGGAGTACCTCAAGAACCACGCCAGCGACTCCGGCGAGGTCACCGACCTCAAGGACATGCAGGTCGGCGTCGGCCGCCGCTTCCGGGGGCTCAAGCTCTGGATGGTCATGCGCACCTACGGCGTCGCCAAGCTGCAGGAGCACATCCGGAGCGACGTCGCCATGGCCAAGGTGTTCGAGGACCTCGTCCGCGGCGACGACAGGTTCGAGGTCGTCGTGCCGAGGAACTTCGCTCTCGTCTGCTTCAGGATCAGGGCCGGCGCCGGCGCCGCCGCCGCGACGGAGGAGGACGCCGACGAGGCGAACCGCGAGCTGATGGAGCGGCTGAACAAGACCGGCAAGGCGTACGTGGCGCACACGGTGGTCGGCGGCAGGTTCGTGCTGCGCTTCGCGGTGGGCTCGTCGCTGCAGGAAGAGCATCACGTGCGGAGCGCGTGGGAGCTCATCAAGAAGACGACCACCGAGATGATGAACTAAGTAAAGAGAAGATTACAAATAAATACACATATTTAGAACACATATACGTTTTTGATTTTTTTTTTTGGGGTTTTAGATGCGAATCTGTTGATTCATTTTGTGAGCTATTTATACCTATGGATATATGGATCAAAATAAATTATTATTTGGTTGTAATTTTTTTAAAAGATGAACTGATACTATACCTTACACAAGAAATACAATATGATAAAAATTTATTTATTACTTTCCCAGAATA
CDS Sequence
- >LOC_Os08g04540.1 CDS ATGGGCAGCTTGGACACCAACCCCACGGCCTTCTCCGCCTTCCCCGCCGGCGAGGGTGAAACCTTCCAGCCGCTCAACGCCGATGATGTCCGGTCCTACCTCCACAAGGCGGTGGACTTCATCTCGGACTACTACAAGTCCGTGGAGTCCATGCCGGTGCTGCCCAATGTCAAGCCGGGGTACCTGCAGGACGAGCTCAGGGCCTCGCCGCCGACGTACTCGGCGCCGTTCGACGTCACCATGAAGGAGCTCCGGAGCTCCGTCGTCCCCGGGATGACGCACTGGGCGAGCCCCAACTTCTTCGCGTTTTTCCCCTCCACGAATAGTGCGGCCGCCATTGCCGGCGACCTCATCGCGTCGGCGATGAACACGGTCGGGTTCACGTGGCAGGCGTCGCCGGCGGCCACCGAGATGGAGGTGCTCGCGCTGGACTGGCTCGCGCAGATGCTCAACCTGCCGACGAGCTTCATGAACCGCACCGGCGAGGGGCGTGGCACCGGCGGTGGGGTTATTCTGGGGACGACCAGCGAGGCGATGCTCGTCACGCTCGTTGCCGCGCGCGACGCCGCGCTGCGGCGGAGCGGCAGCGACGGCGTGGCGGGACTCCACCGGCTCGCCGTGTACGCCGCCGACCAGACGCACTCCACGTTCTTCAAGGCGTGCCGCCTCGCCGGGTTTGATCCGGCGAACATCCGGTCGATCCCCACCGGGGCCGAGACCGACTACGGCCTCGACCCGGCGAGGCTGCTGGAGGCGATGCAGGCCGACGCCGACGCCGGGCTGGTGCCCACCTACGTGTGCGCCACGGTGGGCACCACGTCGTCCAACGCCGTCGACCCGGTGGGCGCCGTGGCCGACGTCGCGGCGAGGTTCGCCGCGTGGGTGCACGTCGACGCGGCGTACGCCGGCAGCGCGTGCATCTGCCCGGAGTTCAGGCACCACCTCGACGGCGTGGAGCGCGTGGACTCCATCAGCATGAGCCCCCACAAATGGCTGATGACCTGCCTCGACTGCACCTGCCTCTACGTGCGCGACACCCACCGCCTCACCGGCTCCCTCGAGACCAACCCGGAGTACCTCAAGAACCACGCCAGCGACTCCGGCGAGGTCACCGACCTCAAGGACATGCAGGTCGGCGTCGGCCGCCGCTTCCGGGGGCTCAAGCTCTGGATGGTCATGCGCACCTACGGCGTCGCCAAGCTGCAGGAGCACATCCGGAGCGACGTCGCCATGGCCAAGGTGTTCGAGGACCTCGTCCGCGGCGACGACAGGTTCGAGGTCGTCGTGCCGAGGAACTTCGCTCTCGTCTGCTTCAGGATCAGGGCCGGCGCCGGCGCCGCCGCCGCGACGGAGGAGGACGCCGACGAGGCGAACCGCGAGCTGATGGAGCGGCTGAACAAGACCGGCAAGGCGTACGTGGCGCACACGGTGGTCGGCGGCAGGTTCGTGCTGCGCTTCGCGGTGGGCTCGTCGCTGCAGGAAGAGCATCACGTGCGGAGCGCGTGGGAGCTCATCAAGAAGACGACCACCGAGATGATGAACTAA
Protein Sequence
- >LOC_Os08g04540.1 protein MGSLDTNPTAFSAFPAGEGETFQPLNADDVRSYLHKAVDFISDYYKSVESMPVLPNVKPGYLQDELRASPPTYSAPFDVTMKELRSSVVPGMTHWASPNFFAFFPSTNSAAAIAGDLIASAMNTVGFTWQASPAATEMEVLALDWLAQMLNLPTSFMNRTGEGRGTGGGVILGTTSEAMLVTLVAARDAALRRSGSDGVAGLHRLAVYAADQTHSTFFKACRLAGFDPANIRSIPTGAETDYGLDPARLLEAMQADADAGLVPTYVCATVGTTSSNAVDPVGAVADVAARFAAWVHVDAAYAGSACICPEFRHHLDGVERVDSISMSPHKWLMTCLDCTCLYVRDTHRLTGSLETNPEYLKNHASDSGEVTDLKDMQVGVGRRFRGLKLWMVMRTYGVAKLQEHIRSDVAMAKVFEDLVRGDDRFEVVVPRNFALVCFRIRAGAGAAAATEEDADEANRELMERLNKTGKAYVAHTVVGGRFVLRFAVGSSLQEEHHVRSAWELIKKTTTEMMN*