Gene Details:
- MSU gene ID: LOC_Os08g19320
- RAPdb gene ID: Os08g0290100
- Gene Symbol: Vsl1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Characterization and Fine Mapping of a Novel Vegetative Senescence Lethal Mutant Locus in Rice.
Function-related keywords:
Literature:
- Characterization and fine mapping of a novel vegetative senescence lethal mutant locus in rice . DOI: 10.1016/j.jgg.2015.05.005 ; PMID: 26408096
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os08g19320.1 cDNA ATGGGCTACCGGCCCAAAAGTACGCGTCCACTTTAGTATGGGCCTCGTGTCCACAGAAGCAACACCACACCACCACGCACGCCTCCGCCGCCGCTCCATGGACGCCGGCGACACATCCGCCGCCGCCGCTGTAGCCCCTACCCCGGCGCGGCTGCGGGAAGCGCTCGCCGCCCTCTCCAAGGCGTTCGAGTCCGGGGATTGCTCCGATGGATCCGCCGCGGCGGCCGTCTCCGACCTCCTCAACGCCGCCGCCGATGCAGCTGATGCGGAGGCCGACGCCGAAGACGAGGCGGCGGCCGGGGTCGTCGAGGAGATGCTCCGGGAGGTGCACGCGTTCCTCTCGTCCCCGTCCTCGAATCAGTTGGCCATAGATGCTCTCTCACTAGAGCTGGTAAAACCTGTGGCGAAGCTGGGGGCACTGATGAGGAATTGCTGGGACATTGCCAACGCTATCATTGAATTCTTCGTGTCAAACTGCAACCCGAGGGACATGCTCTCCATCCTATGTGAGGCAGTAGATGCACCATTGGCATCAAATGGCTCAGTGTACTTTGTTCTTCTATTCAAGGAGCTAGCCAAAGTGCTTGTTTTGATTCAGAGGAGGCATACTGAGCAAGTAAAAGTCACACTTCCTGCTGTCCTTCGAGTTATGAATGCTGTTATACCAGAATGTGACGAGGAACATGGAAAGATCATCGTTGATATGTACAATGCAGCACTTAGAATTGGCAATGCCATTCAAGAAATGTGCAAAAAAATGGTAAACCAGACGAATGAAGAACTCTGTTCTGTACTTAGTCTATACTCCCTTCAGAACATAGCTCTTGTATCAAGATGCAAACAACAGCATATTCTCTCTGCTTGTGGTTCAGTTGTTCTTCAGCATTCAAAAATTCTGACATTTTGTGGGTTCACTTATTTGGGTCTTTTGACTGGTAATGATGTCACCTCAGCCACCGATAAGATTTCAAAAGATGAAGATGCGGATTTGCTCGAGTGCTTTTCTTTTGCAATGAATGGTGCAAATCTTGCAGTTATCTGGACCTATATGGATGATGAAATCTCAAAATATGCTGGCGCTGAGCTGGAATCAGCGCTGAAAGATGTTAAGGGCAACCATACGAGGATGTGGCAAGCAATTAACATTCTTAGATATGTGTTGTCTTCAACTCATTACCCATGGGTAATAAAATCCCACAGTTTGGACTTACTGCTGACTATAGCTAATGAAAGTCGTATTGAGGAAATCAATGATCATGTAGATGTTTCATCTTCTGGTCCTCAAATTTTTGCAACACTCAAGGCCATTGAAAGTGTCATGATTTCCGCCCCAGATGCATTAATGCGGAAGAAAGCTTTTGCTACTTTGAAACAGGTTATTTCAATGGTGCCATCCTCTCAGAGATTCAACATCTTACAGGCTCTTATAAAGAACAGCATCTTCCCTTCATTGACTGCACTTCTCCTAGATCTGGTGAAGGATGAAGTTTCGAGAGAGATTCGTCGAGCTGATCAGGATATTGTTGAATCGGATCAATTACAAGATGGTGGCGAATGGCCACCACCTTGGTTTTCTCATGCACTTGAGTTGGTGGAGCTGATCTTGAAGCCTCCAGAAGGTGGCCCTCCTTGTCTTCCTGATCATGGTGAGCAGGTATTATCAGCTTTGAATTTGCTGCGATTTGTTCTGATAATAGATTCAAGAGGATCAAGATCAAGAAAAATGTTTGGGGAAGAGACTATGAGGAAGGTGTACTCAGAGTGGCTGATGCCATTAAGACCAATTGTTGCAGGAATTCAATCAGAAAGTGAAGAGGATGGTAGCGACGTTGCAAATCATATCATGTGCTCGTTAAATCCTGTTCAATTAGTATTGTACCGCTGCATTGAGCTGGCAGAGGAAAAGATGAAAGGTTTCTAACGTTTTCAGTTCACTGGTTTTTGTACAATATACTGCTGTCTCGAGGCAAAACATGAACAAGTTGTGAATATTATCCCAATGATTTGAAGTTGCGTTTTTTTATGTTGTACAGTGATACTGTCGTCCTTCATAATTCATTTTGCTGG
- >LOC_Os08g19320.2 cDNA ATGGGCTACCGGCCCAAAAGTACGCGTCCACTTTAGTATGGGCCTCGTGTCCACAGAAGCAACACCACACCACCACGCACGCCTCCGCCGCCGCTCCATGGACGCCGGCGACACATCCGCCGCCGCCGCTGTAGCCCCTACCCCGGCGCGGCTGCGGGAAGCGCTCGCCGCCCTCTCCAAGGCGTTCGAGTCCGGGGATTGCTCCGATGGATCCGCCGCGGCGGCCGTCTCCGACCTCCTCAACGCCGCCGCCGATGCAGCTGATGCGGAGGCCGACGCCGAAGACGAGGCGGCGGCCGGGGTCGTCGAGGAGATGCTCCGGGAGGTGCACGCGTTCCTCTCGTCCCCGTCCTCGAATCAGTTGGCCATAGATGCTCTCTCACTAGAGCTGGTAAAACCTGTGGCGAAGCTGGGGGCACTGATGAGGAATTGCTGGGACATTGCCAACGCTATCATTGAATTCTTCGTGTCAAACTGCAACCCGAGGGACATGCTCTCCATCCTATGTGAGGCAGTAGATGCACCATTGGCATCAAATGGCTCAGTGTACTTTGTTCTTCTATTCAAGGAGCTAGCCAAAGTGCTTGTTTTGATTCAGAGGAGGCATACTGAGCAAGTAAAAGTCACACTTCCTGCTGTCCTTCGAGTTATGAATGCTGTTATACCAGAATGTGACGAGGAACATGGAAAGATCATCGTTGATATGTACAATGCAGCACTTAGAATTGGCAATGCCATTCAAGAAATGTGCAAAAAAATGGTAAACCAGACGAATGAAGAACTCTGTTCTGTACTTAGTCTATACTCCCTTCAGAACATAGCTCTTGTATCAAGATGCAAACAACAGCATATTCTCTCTGCTTGTGGTTCAGTTGTTCTTCAGCATTCAAAAATTCTGACATTTTGTGGGTTCACTTATTTGGGTCTTTTGACTGGTAATGATGTCACCTCAGCCACCGATAAGATTTCAAAAGATGAAGATGCGGATTTGCTCGAGTGCTTTTCTTTTGCAATGAATGGTGCAAATCTTGCAGTTATCTGGACCTATATGGATGATGAAATCTCAAAATATGCTGGCGCTGAGCTGGAATCAGCGCTGAAAGATGTTAAGGGCAACCATACGAGGATGTGGCAAGCAATTAACATTCTTAGATATGTGTTGTCTTCAACTCATTACCCATGGGTAATAAAATCCCACAGTTTGGACTTACTGCTGACTATAGCTAATGAAAGTCGTATTGAGGAAATCAATGATCATGTAGATGTTTCATCTTCTGGTCCTCAAATTTTTGCAACACTCAAGGCCATTGAAAGTGTCATGATTTCCGCCCCAGATGCATTAATGCGGAAGAAAGCTTTTGCTACTTTGAAACAGGTTATTTCAATGGTGCCATCCTCTCAGAGATTCAACATCTTACAGGCTCTTATAAAGAACAGCATCTTCCCTTCATTGACTGCACTTCTCCTAGATCTGGTGAAGGATGAAGTTTCGAGAGAGATTCGTCGAGCTGATCAGGATATTGTTGAATCGGATCAATTACAAGATGGTGGCGAATGGCCACCACCTTGGTTTTCTCATGCACTTGAGTTGGTGGAGCTGATCTTGAAGCCTCCAGAAGGTGGCCCTCCTTGTCTTCCTGATCATGGTGAGCAGGTATTATCAGCTTTGAATTTGCTGCGATTTGTTCTGATAATAGATTCAAGAGGATCAAGATCAAGAAAAATGTTTGGGGAAGAGACTATGAGGAAGGTGTACTCAGAGTGGCTGATGCCATTAAGACCAATTGTTGCAGGAATTCAATCAGAAAGTGAAGAGGATGGTAGCGACGTTGCAAATCATATCATGTGCTCGTTAAATCCTGTTCAATTAGTATTGTACCGCTGCATTGAGCTGGCAGAGGAAAAGATGAAAGGTTTCTAACGTTTTCAGTTCACTGGTTTTTGTACAATATACTGCTGTCTCGAGGCAAAACATGAACAAGTTGTGAATATTATCCCAATGATTTGAAGTTGCGTTTTTTTATGTTGTACAGTGATACTGTCGTCCTTCATAATTCATTTTGCTGG
CDS Sequence
- >LOC_Os08g19320.1 CDS ATGGGCCTCGTGTCCACAGAAGCAACACCACACCACCACGCACGCCTCCGCCGCCGCTCCATGGACGCCGGCGACACATCCGCCGCCGCCGCTGTAGCCCCTACCCCGGCGCGGCTGCGGGAAGCGCTCGCCGCCCTCTCCAAGGCGTTCGAGTCCGGGGATTGCTCCGATGGATCCGCCGCGGCGGCCGTCTCCGACCTCCTCAACGCCGCCGCCGATGCAGCTGATGCGGAGGCCGACGCCGAAGACGAGGCGGCGGCCGGGGTCGTCGAGGAGATGCTCCGGGAGGTGCACGCGTTCCTCTCGTCCCCGTCCTCGAATCAGTTGGCCATAGATGCTCTCTCACTAGAGCTGGTAAAACCTGTGGCGAAGCTGGGGGCACTGATGAGGAATTGCTGGGACATTGCCAACGCTATCATTGAATTCTTCGTGTCAAACTGCAACCCGAGGGACATGCTCTCCATCCTATGTGAGGCAGTAGATGCACCATTGGCATCAAATGGCTCAGTGTACTTTGTTCTTCTATTCAAGGAGCTAGCCAAAGTGCTTGTTTTGATTCAGAGGAGGCATACTGAGCAAGTAAAAGTCACACTTCCTGCTGTCCTTCGAGTTATGAATGCTGTTATACCAGAATGTGACGAGGAACATGGAAAGATCATCGTTGATATGTACAATGCAGCACTTAGAATTGGCAATGCCATTCAAGAAATGTGCAAAAAAATGGTAAACCAGACGAATGAAGAACTCTGTTCTGTACTTAGTCTATACTCCCTTCAGAACATAGCTCTTGTATCAAGATGCAAACAACAGCATATTCTCTCTGCTTGTGGTTCAGTTGTTCTTCAGCATTCAAAAATTCTGACATTTTGTGGGTTCACTTATTTGGGTCTTTTGACTGGTAATGATGTCACCTCAGCCACCGATAAGATTTCAAAAGATGAAGATGCGGATTTGCTCGAGTGCTTTTCTTTTGCAATGAATGGTGCAAATCTTGCAGTTATCTGGACCTATATGGATGATGAAATCTCAAAATATGCTGGCGCTGAGCTGGAATCAGCGCTGAAAGATGTTAAGGGCAACCATACGAGGATGTGGCAAGCAATTAACATTCTTAGATATGTGTTGTCTTCAACTCATTACCCATGGGTAATAAAATCCCACAGTTTGGACTTACTGCTGACTATAGCTAATGAAAGTCGTATTGAGGAAATCAATGATCATGTAGATGTTTCATCTTCTGGTCCTCAAATTTTTGCAACACTCAAGGCCATTGAAAGTGTCATGATTTCCGCCCCAGATGCATTAATGCGGAAGAAAGCTTTTGCTACTTTGAAACAGGTTATTTCAATGGTGCCATCCTCTCAGAGATTCAACATCTTACAGGCTCTTATAAAGAACAGCATCTTCCCTTCATTGACTGCACTTCTCCTAGATCTGGTGAAGGATGAAGTTTCGAGAGAGATTCGTCGAGCTGATCAGGATATTGTTGAATCGGATCAATTACAAGATGGTGGCGAATGGCCACCACCTTGGTTTTCTCATGCACTTGAGTTGGTGGAGCTGATCTTGAAGCCTCCAGAAGGTGGCCCTCCTTGTCTTCCTGATCATGGTGAGCAGGTATTATCAGCTTTGAATTTGCTGCGATTTGTTCTGATAATAGATTCAAGAGGATCAAGATCAAGAAAAATGTTTGGGGAAGAGACTATGAGGAAGGTGTACTCAGAGTGGCTGATGCCATTAAGACCAATTGTTGCAGGAATTCAATCAGAAAGTGAAGAGGATGGTAGCGACGTTGCAAATCATATCATGTGCTCGTTAAATCCTGTTCAATTAGTATTGTACCGCTGCATTGAGCTGGCAGAGGAAAAGATGAAAGGTTTCTAA
- >LOC_Os08g19320.2 CDS ATGGGCCTCGTGTCCACAGAAGCAACACCACACCACCACGCACGCCTCCGCCGCCGCTCCATGGACGCCGGCGACACATCCGCCGCCGCCGCTGTAGCCCCTACCCCGGCGCGGCTGCGGGAAGCGCTCGCCGCCCTCTCCAAGGCGTTCGAGTCCGGGGATTGCTCCGATGGATCCGCCGCGGCGGCCGTCTCCGACCTCCTCAACGCCGCCGCCGATGCAGCTGATGCGGAGGCCGACGCCGAAGACGAGGCGGCGGCCGGGGTCGTCGAGGAGATGCTCCGGGAGGTGCACGCGTTCCTCTCGTCCCCGTCCTCGAATCAGTTGGCCATAGATGCTCTCTCACTAGAGCTGGTAAAACCTGTGGCGAAGCTGGGGGCACTGATGAGGAATTGCTGGGACATTGCCAACGCTATCATTGAATTCTTCGTGTCAAACTGCAACCCGAGGGACATGCTCTCCATCCTATGTGAGGCAGTAGATGCACCATTGGCATCAAATGGCTCAGTGTACTTTGTTCTTCTATTCAAGGAGCTAGCCAAAGTGCTTGTTTTGATTCAGAGGAGGCATACTGAGCAAGTAAAAGTCACACTTCCTGCTGTCCTTCGAGTTATGAATGCTGTTATACCAGAATGTGACGAGGAACATGGAAAGATCATCGTTGATATGTACAATGCAGCACTTAGAATTGGCAATGCCATTCAAGAAATGTGCAAAAAAATGGTAAACCAGACGAATGAAGAACTCTGTTCTGTACTTAGTCTATACTCCCTTCAGAACATAGCTCTTGTATCAAGATGCAAACAACAGCATATTCTCTCTGCTTGTGGTTCAGTTGTTCTTCAGCATTCAAAAATTCTGACATTTTGTGGGTTCACTTATTTGGGTCTTTTGACTGGTAATGATGTCACCTCAGCCACCGATAAGATTTCAAAAGATGAAGATGCGGATTTGCTCGAGTGCTTTTCTTTTGCAATGAATGGTGCAAATCTTGCAGTTATCTGGACCTATATGGATGATGAAATCTCAAAATATGCTGGCGCTGAGCTGGAATCAGCGCTGAAAGATGTTAAGGGCAACCATACGAGGATGTGGCAAGCAATTAACATTCTTAGATATGTGTTGTCTTCAACTCATTACCCATGGGTAATAAAATCCCACAGTTTGGACTTACTGCTGACTATAGCTAATGAAAGTCGTATTGAGGAAATCAATGATCATGTAGATGTTTCATCTTCTGGTCCTCAAATTTTTGCAACACTCAAGGCCATTGAAAGTGTCATGATTTCCGCCCCAGATGCATTAATGCGGAAGAAAGCTTTTGCTACTTTGAAACAGGTTATTTCAATGGTGCCATCCTCTCAGAGATTCAACATCTTACAGGCTCTTATAAAGAACAGCATCTTCCCTTCATTGACTGCACTTCTCCTAGATCTGGTGAAGGATGAAGTTTCGAGAGAGATTCGTCGAGCTGATCAGGATATTGTTGAATCGGATCAATTACAAGATGGTGGCGAATGGCCACCACCTTGGTTTTCTCATGCACTTGAGTTGGTGGAGCTGATCTTGAAGCCTCCAGAAGGTGGCCCTCCTTGTCTTCCTGATCATGGTGAGCAGGTATTATCAGCTTTGAATTTGCTGCGATTTGTTCTGATAATAGATTCAAGAGGATCAAGATCAAGAAAAATGTTTGGGGAAGAGACTATGAGGAAGGTGTACTCAGAGTGGCTGATGCCATTAAGACCAATTGTTGCAGGAATTCAATCAGAAAGTGAAGAGGATGGTAGCGACGTTGCAAATCATATCATGTGCTCGTTAAATCCTGTTCAATTAGTATTGTACCGCTGCATTGAGCTGGCAGAGGAAAAGATGAAAGGTTTCTAA
Protein Sequence
- >LOC_Os08g19320.1 protein MGLVSTEATPHHHARLRRRSMDAGDTSAAAAVAPTPARLREALAALSKAFESGDCSDGSAAAAVSDLLNAAADAADAEADAEDEAAAGVVEEMLREVHAFLSSPSSNQLAIDALSLELVKPVAKLGALMRNCWDIANAIIEFFVSNCNPRDMLSILCEAVDAPLASNGSVYFVLLFKELAKVLVLIQRRHTEQVKVTLPAVLRVMNAVIPECDEEHGKIIVDMYNAALRIGNAIQEMCKKMVNQTNEELCSVLSLYSLQNIALVSRCKQQHILSACGSVVLQHSKILTFCGFTYLGLLTGNDVTSATDKISKDEDADLLECFSFAMNGANLAVIWTYMDDEISKYAGAELESALKDVKGNHTRMWQAINILRYVLSSTHYPWVIKSHSLDLLLTIANESRIEEINDHVDVSSSGPQIFATLKAIESVMISAPDALMRKKAFATLKQVISMVPSSQRFNILQALIKNSIFPSLTALLLDLVKDEVSREIRRADQDIVESDQLQDGGEWPPPWFSHALELVELILKPPEGGPPCLPDHGEQVLSALNLLRFVLIIDSRGSRSRKMFGEETMRKVYSEWLMPLRPIVAGIQSESEEDGSDVANHIMCSLNPVQLVLYRCIELAEEKMKGF*
- >LOC_Os08g19320.2 protein MGLVSTEATPHHHARLRRRSMDAGDTSAAAAVAPTPARLREALAALSKAFESGDCSDGSAAAAVSDLLNAAADAADAEADAEDEAAAGVVEEMLREVHAFLSSPSSNQLAIDALSLELVKPVAKLGALMRNCWDIANAIIEFFVSNCNPRDMLSILCEAVDAPLASNGSVYFVLLFKELAKVLVLIQRRHTEQVKVTLPAVLRVMNAVIPECDEEHGKIIVDMYNAALRIGNAIQEMCKKMVNQTNEELCSVLSLYSLQNIALVSRCKQQHILSACGSVVLQHSKILTFCGFTYLGLLTGNDVTSATDKISKDEDADLLECFSFAMNGANLAVIWTYMDDEISKYAGAELESALKDVKGNHTRMWQAINILRYVLSSTHYPWVIKSHSLDLLLTIANESRIEEINDHVDVSSSGPQIFATLKAIESVMISAPDALMRKKAFATLKQVISMVPSSQRFNILQALIKNSIFPSLTALLLDLVKDEVSREIRRADQDIVESDQLQDGGEWPPPWFSHALELVELILKPPEGGPPCLPDHGEQVLSALNLLRFVLIIDSRGSRSRKMFGEETMRKVYSEWLMPLRPIVAGIQSESEEDGSDVANHIMCSLNPVQLVLYRCIELAEEKMKGF*