Gene Details:
- MSU gene ID: LOC_Os08g44280
- RAPdb gene ID: Os08g0557000
- Gene Symbol: OsPIMT1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The germination percentage of transgenic seeds overexpressing OsPIMT1 increased 9-15 % compared to the WT seeds after 21-day of artificial aging, whereas seeds from the OsPIMT1 RNAi lines overaccumulated isoAsp in embryos and experienced rapid loss of seed germinability.
- Confocal visualization of the transient expression of OsPIMTs showed that OsPIMT2 was localized in the chloroplast and nucleus, whereas OsPIMT1 was predominately found in the cytosol.
Function-related keywords:
Literature:
- Protein repair L-isoaspartyl methyltransferase 1 (PIMT1) in rice improves seed longevity by preserving embryo vigor and viability . DOI: 10.1007/s11103-015-0383-1 ; PMID: 26438231
- Rice PROTEIN l-ISOASPARTYL METHYLTRANSFERASE isoforms differentially accumulate during seed maturation to restrict deleterious isoAsp and reactive oxygen species accumulation and are implicated in seed vigor and longevity . DOI: 10.1111/nph.13923 ; PMID: 26987457
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os08g44280.2 cDNA GAGAAGAATCCATCTCTCTCTCTCTCTCCCAATCCCCCACCACCACCGCCAGCCACCAGCCACTGCCGCGGCGGGAATCCGGTTCCCGCGGCGACATCCCCCACGTCTCCGCCGCTGCACCGGCAAAGGCAGCTGCACCGCGACCCACCCGCGCGCTCCCAATCGGCCCCAAGATTAAGATTAAACCAGGAGAGACCACCCGATCGAGTGTTCTCTCACTTTCGCCATGGAGCACCGACTGTGGTCAAGCGGGGCTAGCGACAAGAACAAGGCAATGGTTGAGCAGCTCCAGAGGTACGGGATTATCAAGTCGAGCAAGGTCGCGCAGGTGATGGAGACCATCGACAGGGGGCTGTTTGTGCCTCCTGGTGCTTCTCCCTATTTCGACAGCCCGATGCCCATCGGTTACAACGCCACCATTTCTGCGCCTCACATGCACGCCTCTTGCTTGGAGCTCCTGGAGAAGCACCTTCAGCCTGGCATGCGTGCTCTGGATGTTGGATCAGGCACAGGGTACCTAACAGCTTGCTTCGCGATTATGGTTGGACCAGAAGGGCGAGCAGTTGGTGTTGAACATATCCCAGAGTTGGTTACTTCGTCTATTGAAAACATCAAGAAAAGTGCAGCGGCTCCACAGTTAACTGATGGATCCCTCAGTATACATATTACCGATGGCAGAGAAGGTTGGCCAGAGCTCGCACCCTATGATGCCATCCATGTCGGAGCTGCTGCACCGCAGATTCCACAGGCGTTGATTGAGCAGCTAAAGCCCGGTGGCAGAATGGTGATCCCAGTTGGGACTATGTTCCAGGAGCTGAAAGTGGTGGACAAGAACCAGGATGGCAAGGTCAGCATAAGAGATGAGACGGCTGTGCGCTATGTGCCCCTCACAAGCAAGGATGCGCAGCTGCAGGCTAACTGAATGCACTACCATAATATTCTGCTGAATGTAAAACCTTCAATGCGTGATCCCAGTTACATCAAGATGTTATTATTGTACATAAATTGGTCCTACCGTATGTGTGAATCGCTTGGTGCTTGTCAACAATGTTGGATGTTGGTTCGTCATGAAGCATGGAAGTATGTGCTTGTGTTGATCTCTTTTGCCTCTAATGGTGTTTCCACTACAATGTGCATGACATATTTGTTATCTTCACAACACGGTTGGCTTAGATGTAACGTATCCTGCAGACTTGATCAGCTTTGTGACATTAAAGGGATTGGAGTGTCCATGACTATTGTGGTTTCCTGTGCATTATATGAACAATAGTTTATCAAAGTATTTGGTTCTTGCAAATCCAGAGAACAACATTTCTGAAAGAGAAAAAATAAGCATAATGCATAGGGGTAAGCACTGGCTGCTGCCATGCATTTGCTCCTTTTCTCAGATATATGGTCGACAAGTGAACTTTTGGATTATCACGGAAAAAAAATACTAAGGACATCATCATTATAAATATCCTACTTGGAAAGTTGAACTCATATTTTTGAGAATAATTTAACATAACATCAGCTTGGAAGACACATAAAAAGGACGGGAGGACTCAAAATCAGGAAGCTAACGCGCGCTCTGTAAATGACAACCATCAGCTTCCGCCTTAACGCATAACACTTTAGCATTCTTGTTCAAACGTGCAGACATGCTCCCCAACGCCATATGGAATCAAAAGCCTCGCTGTGGTCGCTCAGCTGCCACATTCACTCGAAGTGGGCGGCCATCCAATTCCTGTAATCCATCATGAACAATTGAGCATAATAA
- >LOC_Os08g44280.1 cDNA GAGAAGAATCCATCTCTCTCTCTCTCTCCCAATCCCCCACCACCACCGCCAGCCACCAGCCACTGCCGCGGCGGGAATCCGGTTCCCGCGGCGACATCCCCCACGTCTCCGCCGCTGCACCGGCAAAGGCAGCTGCACCGCGACCCACCCGCGCGCTCCCAATCGGCCCCAAGATTAAGATTAAACCAGGAGAGACCACCCGATCGAGTGTTCTCTCACTTTCGCCATGGAGCACCGACTGTGGTCAAGCGGGGCTAGCGACAAGAACAAGGCAATGGTTGAGCAGCTCCAGAGGTACGGGATTATCAAGTCGAGCAAGGTCGCGCAGGTGATGGAGACCATCGACAGGGGGCTGTTTGTGCCTCCTGGTGCTTCTCCCTATTTCGACAGCCCGATGCCCATCGGTTACAACGCCACCATTTCTGCGCCTCACATGCACGCCTCTTGCTTGGAGCTCCTGGAGAAGCACCTTCAGCCTGGCATGCGTGCTCTGGATGTTGGATCAGGCACAGGGTACCTAACAGCTTGCTTCGCGATTATGGTTGGACCAGAAGGGCGAGCAGTTGGTGTTGAACATATCCCAGAGTTGGTTACTTCGTCTATTGAAAACATCAAGAAAAGTGCAGCGGCTCCACAGTTAACTGATGGATCCCTCAGTATACATATTACCGATGGCAGAGAAGGTTGGCCAGAGCTCGCACCCTATGATGCCATCCATGTCGGAGCTGCTGCACCGCAGATTCCACAGGCGTTGATTGAGCAGCTAAAGCCCGGTGGCAGAATGGTGATCCCAGTTGGGACTATGTTCCAGGAGCTGAAAGTGGTGGACAAGAACCAGGATGGCAAGGTCAGCATAAGAGATGAGACGGCTGTGCGCTATGTGCCCCTCACAAGCAAGGATGCGCAGCTGCAGGCTAACTGAATGCACTACCATAATATTCTGCTGAATGTAAAACCTTCAATGCGTGATCCCAGTTACATCAAGATGTTATTATTGTACATAAATTGGTCCTACCGTATGTGTGAATCGCTTGGTGCTTGTCAACAATGTTGGATGTTGGTTCGTCATGAAGCATGGAAGTATGTGCTTGTGTTGATCTCTTTTGCCTCTAATGGTGTTTCCACTACAATGTGCATGACATATTTGTTATCTTCACAACACGGTTGGCTTAGATGTAACGTATCCTGCAGACTTGATCAGCTTTGTGACATTAAAGGGATTGGAGTGTCCATGACTATTGTGGTTTCCTGTGCATTATATGAACAATAGTTTATCAAAGTATTTGGTTCTTGCAAATCCAGAGAACAACATTTCTGAAAGAGAAAAAATAAGCATAATGCATAGGGGTAAGCACTGGCTGCTGCCATGCATTTGCTCCTTTTCTCAGATATATGGTCGACAAGTGAACTTTTGGATTATCACGGAAAAAAAATACTAAGGACATCATCATTATAAATATCCTACTTGGAAAGTTGAACTCATATTTTTGAGAATAATTTAACATAACATCAGCTTGGAAGACACATAAAAAGGACGGGAGGACTCAAAATCAGGAAGCTAACGCGCGCTCTGTAAATGACAACCATCAGCTTCCGCCTTAACGCATAACACTTTAGCATTCTTGTTCAAACGTGCAGACATGCTCCCCAACGCCATATGGAATCAAAAGCCTCGCTGTGGTCGCTCAGCTGCCACATTCACTCGAAGTGGGCGGCCATCCAATTCCTGTAATCCATCATGAACAATTGAGCATAATAA
CDS Sequence
- >LOC_Os08g44280.2 CDS ATGGAGCACCGACTGTGGTCAAGCGGGGCTAGCGACAAGAACAAGGCAATGGTTGAGCAGCTCCAGAGGTACGGGATTATCAAGTCGAGCAAGGTCGCGCAGGTGATGGAGACCATCGACAGGGGGCTGTTTGTGCCTCCTGGTGCTTCTCCCTATTTCGACAGCCCGATGCCCATCGGTTACAACGCCACCATTTCTGCGCCTCACATGCACGCCTCTTGCTTGGAGCTCCTGGAGAAGCACCTTCAGCCTGGCATGCGTGCTCTGGATGTTGGATCAGGCACAGGGTACCTAACAGCTTGCTTCGCGATTATGGTTGGACCAGAAGGGCGAGCAGTTGGTGTTGAACATATCCCAGAGTTGGTTACTTCGTCTATTGAAAACATCAAGAAAAGTGCAGCGGCTCCACAGTTAACTGATGGATCCCTCAGTATACATATTACCGATGGCAGAGAAGGTTGGCCAGAGCTCGCACCCTATGATGCCATCCATGTCGGAGCTGCTGCACCGCAGATTCCACAGGCGTTGATTGAGCAGCTAAAGCCCGGTGGCAGAATGGTGATCCCAGTTGGGACTATGTTCCAGGAGCTGAAAGTGGTGGACAAGAACCAGGATGGCAAGGTCAGCATAAGAGATGAGACGGCTGTGCGCTATGTGCCCCTCACAAGCAAGGATGCGCAGCTGCAGGCTAACTGA
- >LOC_Os08g44280.1 CDS ATGGAGCACCGACTGTGGTCAAGCGGGGCTAGCGACAAGAACAAGGCAATGGTTGAGCAGCTCCAGAGGTACGGGATTATCAAGTCGAGCAAGGTCGCGCAGGTGATGGAGACCATCGACAGGGGGCTGTTTGTGCCTCCTGGTGCTTCTCCCTATTTCGACAGCCCGATGCCCATCGGTTACAACGCCACCATTTCTGCGCCTCACATGCACGCCTCTTGCTTGGAGCTCCTGGAGAAGCACCTTCAGCCTGGCATGCGTGCTCTGGATGTTGGATCAGGCACAGGGTACCTAACAGCTTGCTTCGCGATTATGGTTGGACCAGAAGGGCGAGCAGTTGGTGTTGAACATATCCCAGAGTTGGTTACTTCGTCTATTGAAAACATCAAGAAAAGTGCAGCGGCTCCACAGTTAACTGATGGATCCCTCAGTATACATATTACCGATGGCAGAGAAGGTTGGCCAGAGCTCGCACCCTATGATGCCATCCATGTCGGAGCTGCTGCACCGCAGATTCCACAGGCGTTGATTGAGCAGCTAAAGCCCGGTGGCAGAATGGTGATCCCAGTTGGGACTATGTTCCAGGAGCTGAAAGTGGTGGACAAGAACCAGGATGGCAAGGTCAGCATAAGAGATGAGACGGCTGTGCGCTATGTGCCCCTCACAAGCAAGGATGCGCAGCTGCAGGCTAACTGA
Protein Sequence
- >LOC_Os08g44280.2 protein MEHRLWSSGASDKNKAMVEQLQRYGIIKSSKVAQVMETIDRGLFVPPGASPYFDSPMPIGYNATISAPHMHASCLELLEKHLQPGMRALDVGSGTGYLTACFAIMVGPEGRAVGVEHIPELVTSSIENIKKSAAAPQLTDGSLSIHITDGREGWPELAPYDAIHVGAAAPQIPQALIEQLKPGGRMVIPVGTMFQELKVVDKNQDGKVSIRDETAVRYVPLTSKDAQLQAN*
- >LOC_Os08g44280.1 protein MEHRLWSSGASDKNKAMVEQLQRYGIIKSSKVAQVMETIDRGLFVPPGASPYFDSPMPIGYNATISAPHMHASCLELLEKHLQPGMRALDVGSGTGYLTACFAIMVGPEGRAVGVEHIPELVTSSIENIKKSAAAPQLTDGSLSIHITDGREGWPELAPYDAIHVGAAAPQIPQALIEQLKPGGRMVIPVGTMFQELKVVDKNQDGKVSIRDETAVRYVPLTSKDAQLQAN*