Gene Details:
- MSU gene ID: LOC_Os09g31031
- RAPdb gene ID: Os09g0483400
- Gene Symbol: UbL404
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Among the UbL40 family members, UbL404 may have a major role in the regulation of thermosensitive genic male sterility since the expression level of UbL404 was much higher than that of UbL401 and UbL402, consistent with the RNA-seq data in NIL5 and NIL8, and RT–PCR data in AnS-1 (Figs 4a,b and 5d; Supplementary Figs 10, 12, 13 and 15).
Function-related keywords:
Literature:
- RNase Z(S1) processes UbL40 mRNAs and controls thermosensitive genic male sterility in rice . DOI: 10.1038/ncomms5884 ; PMID: 25208476
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os09g31031.1 cDNA CGGCGCGGCGCACCACTCCACCACCACCACCACCACTCCACCGATCGGCGAGAGCGCGGGGAGATCGTTCGACGGCGGCAAGATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGATGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCAGCAGGGGCGGCTACACCATCCAGGAGCCCACCCTCCGGGCTCTTGCGCTCAAGTACAGAGAGAAGAAGAAGGTGCTATGCACGCCTTCCCATCAGGTCTCACCACTGCCGCAAGAAGAAGTGTGGCCACAGCAAGGAGCTGAGGTTGAAGAAGAAGTTCATCAACTCGCTTTCGATAGCGTGAGGCACTGGAAAGTGTTCACCAGCTGAATCAATCTCTTGGATCTCCGTGTGCGCAGCTACCATGTTATGTCCAGTTTAGAAGTACTCCGTAGTTGTTAATCTCTTGGAACTTCGTATGCCCAGCTACCATGTTATGTCCGTAGTCTAGAAGTAGTTGTGGTACTTAGTACGCTTGAGAGCTCTGGGTTGTTGCTTAAAGAAGTTGTAACCCTGCGAAGCTGCGACTGGGATGTTGAACCCTCTATCATCACTCTGAATGAAGAAGTTATCGTTACTAGTAGTAAATTTTTAATCTCCTCCCTTTTATTC
- >LOC_Os09g31031.2 cDNA CGGCGCGGCGCACCACTCCACCACCACCACCACCACTCCACCGATCGGCGAGAGCGCGGGGAGATCGTTCGACGGCGGCAAGATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGATGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCAGCAGGGGCGGCTACACCATCCAGGAGCCCACCCTCCGGGCTCTTGCGCTCAAGTACAGAGAGAAGAAGAAGGTGCTATGCACGCCTTCCCATCAGGTCTCACCACTGCCGCAAGAAGAAGTGTGGCCACAGCAAGGAGCTGAGGTTGAAGAAGAAGTTCATCAACTCGCTTTCGATAGCGTGAGGCACTGGAAAGTGTTCACCAGCTGAATCAATCTCTTGGATCTCCGTGTGCGCAGCTACCATGTTATGTCCAGTTTAGAAGTACTCCGTAGTTGTTAATCTCTTGGAACTTCGTATGCCCAGCTACCATGTTATGTCCGTAGTCTAGAAGTAGTTGTGGTACTTAGTACGCTTGAGAGCTCTGGGTTGTTGCTTAAAGAAGTTGTAACCCTGCGAAGCTGCGACTGGGATGTTGAACCCTCTATCATCACTCTGAATGAAGAAGTTATCGTTACTAGTAGTAAATTTTTAATCTCCTCCCTTTTATTC
- >LOC_Os09g31031.3 cDNA CGGCGCGGCGCACCACTCCACCACCACCACCACCACTCCACCGATCGGCGAGAGCGCGGGGAGATCGTTCGACGGCGGCAAGATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGATGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCAGCAGGGGCGGCTACACCATCCAGGAGCCCACCCTCCGGGCTCTTGCGCTCAAGTACAGAGAGAAGAAGAAGGTGCTATGCACGCCTTCCCATCAGGTCTCACCACTGCCGCAAGAAGAAGTGTGGCCACAGCAAGGAGCTGAGGTTGAAGAAGAAGTTCATCAACTCGCTTTCGATAGCGTGAGGCACTGGAAAGTGTTCACCAGCTGAATCAATCTCTTGGATCTCCGTGTGCGCAGCTACCATGTTATGTCCAGTTTAGAAGTACTCCGTAGTTGTTAATCTCTTGGAACTTCGTATGCCCAGCTACCATGTTATGTCCGTAGTCTAGAAGTAGTTGTGGTACTTAGTACGCTTGAGAGCTCTGGGTTGTTGCTTAAAGAAGTTGTAACCCTGCGAAGCTGCGACTGGGATGTTGAACCCTCTATCATCACTCTGAATGAAGAAGTTATCGTTACTAGTAGTAAATTTTTAATCTCCTCCCTTTTATTC
CDS Sequence
- >LOC_Os09g31031.1 CDS ATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGATGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCAGCAGGGGCGGCTACACCATCCAGGAGCCCACCCTCCGGGCTCTTGCGCTCAAGTACAGAGAGAAGAAGAAGGTGCTATGCACGCCTTCCCATCAGGTCTCACCACTGCCGCAAGAAGAAGTGTGGCCACAGCAAGGAGCTGAGGTTGAAGAAGAAGTTCATCAACTCGCTTTCGATAGCGTGAGGCACTGGAAAGTGTTCACCAGCTGA
- >LOC_Os09g31031.2 CDS ATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGATGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCAGCAGGGGCGGCTACACCATCCAGGAGCCCACCCTCCGGGCTCTTGCGCTCAAGTACAGAGAGAAGAAGAAGGTGCTATGCACGCCTTCCCATCAGGTCTCACCACTGCCGCAAGAAGAAGTGTGGCCACAGCAAGGAGCTGAGGTTGAAGAAGAAGTTCATCAACTCGCTTTCGATAGCGTGAGGCACTGGAAAGTGTTCACCAGCTGA
- >LOC_Os09g31031.3 CDS ATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACGCTGGAGGTGGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGATGACGGCCGCACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGGCAGCAGGGGCGGCTACACCATCCAGGAGCCCACCCTCCGGGCTCTTGCGCTCAAGTACAGAGAGAAGAAGAAGGTGCTATGCACGCCTTCCCATCAGGTCTCACCACTGCCGCAAGAAGAAGTGTGGCCACAGCAAGGAGCTGAGGTTGAAGAAGAAGTTCATCAACTCGCTTTCGATAGCGTGAGGCACTGGAAAGTGTTCACCAGCTGA
Protein Sequence
- >LOC_Os09g31031.1 protein MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGSRGGYTIQEPTLRALALKYREKKKVLCTPSHQVSPLPQEEVWPQQGAEVEEEVHQLAFDSVRHWKVFTS*
- >LOC_Os09g31031.2 protein MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGSRGGYTIQEPTLRALALKYREKKKVLCTPSHQVSPLPQEEVWPQQGAEVEEEVHQLAFDSVRHWKVFTS*
- >LOC_Os09g31031.3 protein MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGSRGGYTIQEPTLRALALKYREKKKVLCTPSHQVSPLPQEEVWPQQGAEVEEEVHQLAFDSVRHWKVFTS*