Gene Details:
- MSU gene ID: LOC_Os09g39870
- RAPdb gene ID: Os09g0572200
- Gene Symbol: OsLpa1-P
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Novel allelic variant of Lpa1 gene associated with a significant reduction in seed phytic acid content in rice (Oryza sativa L.) . DOI: 10.1371/journal.pone.0209636 ; PMID: 30870429
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os09g39870.1 cDNA GAGGTTGGGCTAGGTGCGGTGCAGACGGTGTCGGGGGGTGCAGGGCAGGCGCAAAAGGAATTACGGAATTGCCCCAACCAAGGAGGAGACGGAGGGGAGGGCAAGAAGAAGAAGGACGGTGCAGAGGAAAGGAAAGGATTGGAATTCCAGGGGCGACGACATGGCCGCCGTGCAGGGGCAGGGGCAGGGGAAGCTCCTGTACATTGTGGTGGTCGACGACGATGGCGCCACCTTCCGCTACACGCGCTCCCTCCTCCACAGCACTCTGCAGCTGATGGGATGCAAGCCGCGCCATGCCTTCGAGATCAGCGGCAGGGTGTTCGACGAGATCCGAGGTCACATGGGCGGTGACATGGCCATGGGCGGCGGCGGTGGCGTGCAGCGCTACGAGCTGGCCGCCGACGCGGAAGCCGCCAGCCCCAGGCAGTTCCAGTTCGAGCTCTACAAGCGCCGCACCACCCTTCTCATCCCTCGCCCGCTCTTCCTCCGCCTCGTCTGCCACGCCCTCGCCCTCTACAAGTATGTCGCCCCCGACCAGCGCTCTGATCTCCACCGAGCCTGCAGGATCCGGGAAAGGAAGGAATCAGTCACCATTCTTCTCTGCGGAACCAGCGGCTGCGGCAAGTCTACTCTTTCCACCTTGCTGGGGAGCAGATTAGGAATCACTACTGTAGTCTCCACCGATTCCATTCGCCACATGATGCGGAGCTTTGTTGAAGAGAAACAAAATCCCCTTCTCTGGGCATCTACCTATCATGCAGGCGAATGCCTCGACCCAGTAGCGGTCGCTGATGCTAAAGCTAGGCGCAAAGCCAAAAAACGCTCAGGCATCTCAACGACCTCAACCATTGATTTTGATAAAACCAGGCCTCTCAATGACAAACCTGACGGCAAACCAATTGGGAAGAAGCAGATGGCCATAGAAGGCTACAAAGCACAAAGTGAGATGGTCATTGATAGTTTGGATCGGTTGATTACTGCCTGGGAGGATCGCAAGGAATCAGTTGTTGTTGAGGGTGTTCACCTAAGCCTTAATTTTGTGATGGGGCTAATGAGGAAACATCCTTCTATAATACCTTTTATGATCTACATATCCGATGAGGGCAAGCACACCGAGAGGTTTGCCGTACGTGCAAAGTACATGACACTTGACCCAACAAAAAATAAGTACGTCAAATACATCAGCAACATTAGAACTATCCAAGAGTACCTCTGCAGCCGAGCCGACAAGTACCTAGTTCCCAAGGTGAACAACACTAATGTTGATCGGAGTGTGGCTTCTATCCATGCCACTGTCTTTAGCTGCCTCCGTAGGAGAGCTGCTGGTGATCAGTTATATGACCCTGCTACAAACACAGTGGCAGTTGTAAACGAGGAATACAAAAACCAATGTGTGGCCAACTCCATGAGTTCCAAGGGGATGTTCAAATTGATTCAAAGGTTAGGATCCTCAAGAAAGCTCATGGCCATTGTCAATGTGGATGGATCTGTTTCAAAGGCTTGGCCGGTTGAGTCCAGCAGCGGGGATGGAAAAGGCGGTTCGGAAAATGGCAGTAAGAAATATGTAGGCGATCCAATATACGGGCCTCTAAATATTGGAAGGGCAGAGTCAGTCAATCTCCAGTTTGGCGCTTTCGGAATAAGTGCCTGGCCTACTGATGCAGGCTGTACAAGTCAAGCTGGAAGTGTCAACGAGTCATGGGACAATGCTAATGAAGGCACTGGAAGCCATGTTCCTTCTTCTTCTGGTTCTCCTAAGAAGTTGGATGGACATTGTAAAGAGATTAAAGAATCAGCAGCGGCATCTGGAAGTGATGATGACGAAGAAGAAGAAGAAGAAGCGGCTGATGTTCCACCTAATTCAGGGAGTGAGGAGGACCTAAGTGAAGAAGACATAAGGGCGATCCATGAGGAGATGGAAGGTTCCGTCGATGAAGATTGCAATAGGTCTGATGAGGAATATGATGACCTGGCCATGCGTGATTGCATGGAGAATGGTTTTTTGACCGACGATGGTGTTGTTCACACCGTATTTGATGGCAACGGACAGAAGCACAGCACATTGAGAAAGCGTCAAGTTAATTTGCGTACCCTATCAAAGATCGACTTAGACTCTCCTGACACTGCACGCTCTTCTTCTGCTCTTCCTATTAGCGCAAGCAGCAAGCGAAATGGCACAAGGAGGTGGAAGCGGTCCTTGAGTGAATCATTTCGTTCACGGCCACGGAGTGCTCCATCTTTAGTGGAATTGACGCCAAAGCACAAGGGCTCAGCCGTTCCAGAGGTGGCTCCCGACAAGTAGAACTGCATATAACCAGGGTATATCTGCCTAACTAGTGTTTTGCAGGAGGCCTAGACTTAACAGATGAATAACCGATTTTTTTTTCTTTCTTTCTGGTCTTTAACCCTCATGCCTTTTTTTTCCTGGACTTGGAGAGGATGCAGATAAAAATTCACACAGCGTGATTCTTTTGGGAGTTATGTTTTCTGTTTGCATATGCCTAAGCTGTAAATGATGAAAATACAGTATATGTACTGTCTGAACCCTCCGAGATGTAGAGAAGTTTGAGGCAATGTGTTGTTCTTATCAATGCTGCACATCACCAATTTACCTTGACAGGCA
- >LOC_Os09g39870.2 cDNA GAGGTTGGGCTAGGTGCGGTGCAGACGGTGTCGGGGGGTGCAGGGCAGGCGCAAAAGGAATTACGGAATTGCCCCAACCAAGGAGGAGACGGAGGGGAGGGCAAGAAGAAGAAGGACGGTGCAGAGGAAAGGAAAGGATTGGAATTCCAGGGGCGACGACATGGCCGCCGTGCAGGGGCAGGGGCAGGGGAAGCTCCTGTACATTGTGGTGGTCGACGACGATGGCGCCACCTTCCGCTACACGCGCTCCCTCCTCCACAGCACTCTGCAGCTGATGGGATGCAAGCCGCGCCATGCCTTCGAGATCAGCGGCAGGGTGTTCGACGAGATCCGAGGTCACATGGGCGGTGACATGGCCATGGGCGGCGGCGGTGGCGTGCAGCGCTACGAGCTGGCCGCCGACGCGGAAGCCGCCAGCCCCAGGCAGTTCCAGTTCGAGCTCTACAAGCGCCGCACCACCCTTCTCATCCCTCGCCCGCTCTTCCTCCGCCTCGTCTGCCACGCCCTCGCCCTCTACAAGTATGTCGCCCCCGACCAGCGCTCTGATCTCCACCGAGCCTGCAGGATCCGGGAAAGGAAGGAATCAGTCACCATTCTTCTCTGCGGAACCAGCGGCTGCGGCAAGTCTACTCTTTCCACCTTGCTGGGGAGCAGATTAGGAATCACTACTGTAGTCTCCACCGATTCCATTCGCCACATGATGCGGAGCTTTGTTGAAGAGAAACAAAATCCCCTTCTCTGGGCATCTACCTATCATGCAGGCGAATGCCTCGACCCAGTAGCGGTCGCTGATGCTAAAGCTAGGCGCAAAGCCAAAAAACGCTCAGGCATCTCAACGACCTCAACCATTGATTTTGATAAAACCAGGCCTCTCAATGACAAACCTGACGGCAAACCAATTGGGAAGAAGCAGATGGCCATAGAAGGCTACAAAGCACAAAGTGAGATGGTCATTGATAGTTTGGATCGGTTGATTACTGCCTGGGAGGATCGCAAGGAATCAGTTGTTGTTGAGGGTGTTCACCTAAGCCTTAATTTTGTGATGGGGCTAATGAGGAAACATCCTTCTATAATACCTTTTATGATCTACATATCCGATGAGGGCAAGCACACCGAGAGGTTTGCCGTACGTGCAAAGTACATGACACTTGACCCAACAAAAAATAAGTACGTCAAATACATCAGCAACATTAGAACTATCCAAGAGTACCTCTGCAGCCGAGCCGACAAGTACCTAGTTCCCAAGGTGAACAACACTAATGTTGATCGGAGTGTGGCTTCTATCCATGCCACTGTCTTTAGCTGCCTCCGTAGGAGAGCTGCTGGTGATCAGTTATATGACCCTGCTACAAACACAGTGGCAGTTGTAAACGAGGAATACAAAAACCAATGTGTGGCCAACTCCATGAGTTCCAAGGGGATGTTCAAATTGATTCAAAGGTTAGGATCCTCAAGAAAGCTCATGGCCATTGTCAATGTGGATGGATCTGTTTCAAAGGCTTGGCCGGTTGAGTCCAGCAGCGGGGATGGAAAAGGCGGTTCGGAAAATGGCAGTAAGAAATATGTAGGCGATCCAATATACGGGCCTCTAAATATTGGAAGGGCAGAGTCAGTCAATCTCCAGTTTGGCGCTTTCGGAATAAGTGCCTGGCCTACTGATGCAGGCTGTACAAGTCAAGCTGGAAGTGTCAACGAGTCATGGGACAATGCTAATGAAGGCACTGGAAGCCATGTTCCTTCTTCTTCTGGTTCTCCTAAGAAGTTGGATGGACATTGTAAAGAGATTAAAGAATCAGCAGCGGCATCTGGAAGTGATGATGACGAAGAAGAAGAAGAAGAAGCGGCTGATGTTCCACCTAATTCAGGGAGTGAGGAGGACCTAAGTGAAGAAGACATAAGGGCGATCCATGAGGAGATGGAAGGTTCCGTCGATGAAGATTGCAATAGGTCTGATGAGGAATATGATGACCTGGCCATGCGTGATTGCATGGAGAATGGTTTTTTGACCGACGATGGTGTTGTTCACACCGTATTTGATGGCAACGGACAGAAGCACAGCACATTGAGAAAGCGTCAAGTTAATTTGCGTACCCTATCAAAGATCGACTTAGACTCTCCTGACACTGCACGCTCTTCTTCTGCTCTTCCTATTAGCGCAAGCAGCAAGCGAAATGGCACAAGGAGGTGGAAGCGGTCCTTGAGTGAATCATTTCGTTCACGGCCACGGAGTGCTCCATCTTTAGTGGAATTGACGCCAAAGCACAAGGGCTCAGCCGTTCCAGAGGTGGCTCCCGACAAGTAGAACTGCATATAACCAGGGTATATCTGCCTAACTAGTGTTTTGCAGGAGGCCTAGACTTAACAGATGAATAACCGATTTTTTTTTCTTTCTTTCTGGTCTTTAACCCTCATGCCTTTTTTTTCCTGGACTTGGAGAGGATGCAGATAAAAATTCACACAGCGTGATTCTTTTGGGAGTTATGTTTTCTGTTTGCATATGCCTAAGCTGTAAATGATGAAAATACAGTATATGTACTGTCTGAACCCTCCGAGATGTAGAGAAGTTTGAGGCAATGTGTTGTTCTTATCAATGCTGCACATCACCAATTTACCTTGACAGGCA
CDS Sequence
- >LOC_Os09g39870.1 CDS ATGGCCGCCGTGCAGGGGCAGGGGCAGGGGAAGCTCCTGTACATTGTGGTGGTCGACGACGATGGCGCCACCTTCCGCTACACGCGCTCCCTCCTCCACAGCACTCTGCAGCTGATGGGATGCAAGCCGCGCCATGCCTTCGAGATCAGCGGCAGGGTGTTCGACGAGATCCGAGGTCACATGGGCGGTGACATGGCCATGGGCGGCGGCGGTGGCGTGCAGCGCTACGAGCTGGCCGCCGACGCGGAAGCCGCCAGCCCCAGGCAGTTCCAGTTCGAGCTCTACAAGCGCCGCACCACCCTTCTCATCCCTCGCCCGCTCTTCCTCCGCCTCGTCTGCCACGCCCTCGCCCTCTACAAGTATGTCGCCCCCGACCAGCGCTCTGATCTCCACCGAGCCTGCAGGATCCGGGAAAGGAAGGAATCAGTCACCATTCTTCTCTGCGGAACCAGCGGCTGCGGCAAGTCTACTCTTTCCACCTTGCTGGGGAGCAGATTAGGAATCACTACTGTAGTCTCCACCGATTCCATTCGCCACATGATGCGGAGCTTTGTTGAAGAGAAACAAAATCCCCTTCTCTGGGCATCTACCTATCATGCAGGCGAATGCCTCGACCCAGTAGCGGTCGCTGATGCTAAAGCTAGGCGCAAAGCCAAAAAACGCTCAGGCATCTCAACGACCTCAACCATTGATTTTGATAAAACCAGGCCTCTCAATGACAAACCTGACGGCAAACCAATTGGGAAGAAGCAGATGGCCATAGAAGGCTACAAAGCACAAAGTGAGATGGTCATTGATAGTTTGGATCGGTTGATTACTGCCTGGGAGGATCGCAAGGAATCAGTTGTTGTTGAGGGTGTTCACCTAAGCCTTAATTTTGTGATGGGGCTAATGAGGAAACATCCTTCTATAATACCTTTTATGATCTACATATCCGATGAGGGCAAGCACACCGAGAGGTTTGCCGTACGTGCAAAGTACATGACACTTGACCCAACAAAAAATAAGTACGTCAAATACATCAGCAACATTAGAACTATCCAAGAGTACCTCTGCAGCCGAGCCGACAAGTACCTAGTTCCCAAGGTGAACAACACTAATGTTGATCGGAGTGTGGCTTCTATCCATGCCACTGTCTTTAGCTGCCTCCGTAGGAGAGCTGCTGGTGATCAGTTATATGACCCTGCTACAAACACAGTGGCAGTTGTAAACGAGGAATACAAAAACCAATGTGTGGCCAACTCCATGAGTTCCAAGGGGATGTTCAAATTGATTCAAAGGTTAGGATCCTCAAGAAAGCTCATGGCCATTGTCAATGTGGATGGATCTGTTTCAAAGGCTTGGCCGGTTGAGTCCAGCAGCGGGGATGGAAAAGGCGGTTCGGAAAATGGCAGTAAGAAATATGTAGGCGATCCAATATACGGGCCTCTAAATATTGGAAGGGCAGAGTCAGTCAATCTCCAGTTTGGCGCTTTCGGAATAAGTGCCTGGCCTACTGATGCAGGCTGTACAAGTCAAGCTGGAAGTGTCAACGAGTCATGGGACAATGCTAATGAAGGCACTGGAAGCCATGTTCCTTCTTCTTCTGGTTCTCCTAAGAAGTTGGATGGACATTGTAAAGAGATTAAAGAATCAGCAGCGGCATCTGGAAGTGATGATGACGAAGAAGAAGAAGAAGAAGCGGCTGATGTTCCACCTAATTCAGGGAGTGAGGAGGACCTAAGTGAAGAAGACATAAGGGCGATCCATGAGGAGATGGAAGGTTCCGTCGATGAAGATTGCAATAGGTCTGATGAGGAATATGATGACCTGGCCATGCGTGATTGCATGGAGAATGGTTTTTTGACCGACGATGGTGTTGTTCACACCGTATTTGATGGCAACGGACAGAAGCACAGCACATTGAGAAAGCGTCAAGTTAATTTGCGTACCCTATCAAAGATCGACTTAGACTCTCCTGACACTGCACGCTCTTCTTCTGCTCTTCCTATTAGCGCAAGCAGCAAGCGAAATGGCACAAGGAGGTGGAAGCGGTCCTTGAGTGAATCATTTCGTTCACGGCCACGGAGTGCTCCATCTTTAGTGGAATTGACGCCAAAGCACAAGGGCTCAGCCGTTCCAGAGGTGGCTCCCGACAAGTAG
- >LOC_Os09g39870.2 CDS ATGGCCGCCGTGCAGGGGCAGGGGCAGGGGAAGCTCCTGTACATTGTGGTGGTCGACGACGATGGCGCCACCTTCCGCTACACGCGCTCCCTCCTCCACAGCACTCTGCAGCTGATGGGATGCAAGCCGCGCCATGCCTTCGAGATCAGCGGCAGGGTGTTCGACGAGATCCGAGGTCACATGGGCGGTGACATGGCCATGGGCGGCGGCGGTGGCGTGCAGCGCTACGAGCTGGCCGCCGACGCGGAAGCCGCCAGCCCCAGGCAGTTCCAGTTCGAGCTCTACAAGCGCCGCACCACCCTTCTCATCCCTCGCCCGCTCTTCCTCCGCCTCGTCTGCCACGCCCTCGCCCTCTACAAGTATGTCGCCCCCGACCAGCGCTCTGATCTCCACCGAGCCTGCAGGATCCGGGAAAGGAAGGAATCAGTCACCATTCTTCTCTGCGGAACCAGCGGCTGCGGCAAGTCTACTCTTTCCACCTTGCTGGGGAGCAGATTAGGAATCACTACTGTAGTCTCCACCGATTCCATTCGCCACATGATGCGGAGCTTTGTTGAAGAGAAACAAAATCCCCTTCTCTGGGCATCTACCTATCATGCAGGCGAATGCCTCGACCCAGTAGCGGTCGCTGATGCTAAAGCTAGGCGCAAAGCCAAAAAACGCTCAGGCATCTCAACGACCTCAACCATTGATTTTGATAAAACCAGGCCTCTCAATGACAAACCTGACGGCAAACCAATTGGGAAGAAGCAGATGGCCATAGAAGGCTACAAAGCACAAAGTGAGATGGTCATTGATAGTTTGGATCGGTTGATTACTGCCTGGGAGGATCGCAAGGAATCAGTTGTTGTTGAGGGTGTTCACCTAAGCCTTAATTTTGTGATGGGGCTAATGAGGAAACATCCTTCTATAATACCTTTTATGATCTACATATCCGATGAGGGCAAGCACACCGAGAGGTTTGCCGTACGTGCAAAGTACATGACACTTGACCCAACAAAAAATAAGTACGTCAAATACATCAGCAACATTAGAACTATCCAAGAGTACCTCTGCAGCCGAGCCGACAAGTACCTAGTTCCCAAGGTGAACAACACTAATGTTGATCGGAGTGTGGCTTCTATCCATGCCACTGTCTTTAGCTGCCTCCGTAGGAGAGCTGCTGGTGATCAGTTATATGACCCTGCTACAAACACAGTGGCAGTTGTAAACGAGGAATACAAAAACCAATGTGTGGCCAACTCCATGAGTTCCAAGGGGATGTTCAAATTGATTCAAAGGTTAGGATCCTCAAGAAAGCTCATGGCCATTGTCAATGTGGATGGATCTGTTTCAAAGGCTTGGCCGGTTGAGTCCAGCAGCGGGGATGGAAAAGGCGGTTCGGAAAATGGCAGTAAGAAATATGTAGGCGATCCAATATACGGGCCTCTAAATATTGGAAGGGCAGAGTCAGTCAATCTCCAGTTTGGCGCTTTCGGAATAAGTGCCTGGCCTACTGATGCAGGCTGTACAAGTCAAGCTGGAAGTGTCAACGAGTCATGGGACAATGCTAATGAAGGCACTGGAAGCCATGTTCCTTCTTCTTCTGGTTCTCCTAAGAAGTTGGATGGACATTGTAAAGAGATTAAAGAATCAGCAGCGGCATCTGGAAGTGATGATGACGAAGAAGAAGAAGAAGAAGCGGCTGATGTTCCACCTAATTCAGGGAGTGAGGAGGACCTAAGTGAAGAAGACATAAGGGCGATCCATGAGGAGATGGAAGGTTCCGTCGATGAAGATTGCAATAGGTCTGATGAGGAATATGATGACCTGGCCATGCGTGATTGCATGGAGAATGGTTTTTTGACCGACGATGGTGTTGTTCACACCGTATTTGATGGCAACGGACAGAAGCACAGCACATTGAGAAAGCGTCAAGTTAATTTGCGTACCCTATCAAAGATCGACTTAGACTCTCCTGACACTGCACGCTCTTCTTCTGCTCTTCCTATTAGCGCAAGCAGCAAGCGAAATGGCACAAGGAGGTGGAAGCGGTCCTTGAGTGAATCATTTCGTTCACGGCCACGGAGTGCTCCATCTTTAGTGGAATTGACGCCAAAGCACAAGGGCTCAGCCGTTCCAGAGGTGGCTCCCGACAAGTAG
Protein Sequence
- >LOC_Os09g39870.1 protein MAAVQGQGQGKLLYIVVVDDDGATFRYTRSLLHSTLQLMGCKPRHAFEISGRVFDEIRGHMGGDMAMGGGGGVQRYELAADAEAASPRQFQFELYKRRTTLLIPRPLFLRLVCHALALYKYVAPDQRSDLHRACRIRERKESVTILLCGTSGCGKSTLSTLLGSRLGITTVVSTDSIRHMMRSFVEEKQNPLLWASTYHAGECLDPVAVADAKARRKAKKRSGISTTSTIDFDKTRPLNDKPDGKPIGKKQMAIEGYKAQSEMVIDSLDRLITAWEDRKESVVVEGVHLSLNFVMGLMRKHPSIIPFMIYISDEGKHTERFAVRAKYMTLDPTKNKYVKYISNIRTIQEYLCSRADKYLVPKVNNTNVDRSVASIHATVFSCLRRRAAGDQLYDPATNTVAVVNEEYKNQCVANSMSSKGMFKLIQRLGSSRKLMAIVNVDGSVSKAWPVESSSGDGKGGSENGSKKYVGDPIYGPLNIGRAESVNLQFGAFGISAWPTDAGCTSQAGSVNESWDNANEGTGSHVPSSSGSPKKLDGHCKEIKESAAASGSDDDEEEEEEAADVPPNSGSEEDLSEEDIRAIHEEMEGSVDEDCNRSDEEYDDLAMRDCMENGFLTDDGVVHTVFDGNGQKHSTLRKRQVNLRTLSKIDLDSPDTARSSSALPISASSKRNGTRRWKRSLSESFRSRPRSAPSLVELTPKHKGSAVPEVAPDK*
- >LOC_Os09g39870.2 protein MAAVQGQGQGKLLYIVVVDDDGATFRYTRSLLHSTLQLMGCKPRHAFEISGRVFDEIRGHMGGDMAMGGGGGVQRYELAADAEAASPRQFQFELYKRRTTLLIPRPLFLRLVCHALALYKYVAPDQRSDLHRACRIRERKESVTILLCGTSGCGKSTLSTLLGSRLGITTVVSTDSIRHMMRSFVEEKQNPLLWASTYHAGECLDPVAVADAKARRKAKKRSGISTTSTIDFDKTRPLNDKPDGKPIGKKQMAIEGYKAQSEMVIDSLDRLITAWEDRKESVVVEGVHLSLNFVMGLMRKHPSIIPFMIYISDEGKHTERFAVRAKYMTLDPTKNKYVKYISNIRTIQEYLCSRADKYLVPKVNNTNVDRSVASIHATVFSCLRRRAAGDQLYDPATNTVAVVNEEYKNQCVANSMSSKGMFKLIQRLGSSRKLMAIVNVDGSVSKAWPVESSSGDGKGGSENGSKKYVGDPIYGPLNIGRAESVNLQFGAFGISAWPTDAGCTSQAGSVNESWDNANEGTGSHVPSSSGSPKKLDGHCKEIKESAAASGSDDDEEEEEEAADVPPNSGSEEDLSEEDIRAIHEEMEGSVDEDCNRSDEEYDDLAMRDCMENGFLTDDGVVHTVFDGNGQKHSTLRKRQVNLRTLSKIDLDSPDTARSSSALPISASSKRNGTRRWKRSLSESFRSRPRSAPSLVELTPKHKGSAVPEVAPDK*