Gene Details:
- MSU gene ID: LOC_Os10g30156
- RAPdb gene ID: Os10g0437600
- Gene Symbol: SSIIC
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Knockout of a starch synthase gene OsSSIIIa/Flo5 causes white-core floury endosperm in rice (Oryza sativa L.) . DOI: 10.1007/s00299-007-0309-8 ; PMID: 17297616
- Genetic diversity and domestication history of African rice (Oryza glaberrima) as inferred from multiple gene sequences . DOI: 10.1007/s00122-011-1563-2 ; PMID: 21400109
- Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities . DOI: 10.1073/pnas.0912396106 ; PMID: 20018713
- Genetic analysis of starch paste viscosity parameters in glutinous rice (Oryza sativa L.) . DOI: 10.1007/s00122-010-1423-5 ; PMID: 20737264
Related News:
Gene Resources:
- NCBI ID: AK072339
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os10g30156.1 cDNA AAATCGTGGAACTCAACGGGAGTCTCCTCGCGAGGTCGAGTGGACTCCACCACCTTCTCCTCCTCCACTCCAAGCCCACGAATTCGGATCAGCGCCGCCGCCGCCGCCGCCGCCGCCGCGGGAGGAGGGCTCGCCGATTCCACTACTTCACTCCAGTAGGTGGCCAACGCGCGGGGTGGGAGCAGCAGCGACGACCTCCAATGGCGGCGGCGGCCGTCTCCTCCCTCCTCGCCCCTTCGGGATCCTGCTACTCCCCCGGATGCCACAGCTGCTGGGGTCCCGGGCCCGGAGGCGGGCGGCGCCTACCTTCCCCGCGCCGGCGCCCGATTACCGCCGCGGCTCGCCCTACTTGGGCAGTGCCGAGGAGGAGCAGGTTGGAGTGGGGGCGTGTGGAGGCTCAGAATTCGGGCGCTCGCACCAGCTGCCGAGCAGCACTGCAATGGCTATCATCCACGGCAAGGTCCCATGTGAATGTTGGTTATGGGTCGCCGCTGGTGTTCCCAGGTTTGACCAAACCGGGGTCAAGCAGGTGTCTATGCGTTGTTGGAATGGTCGGCAATGCAGGGAATCAAGTTGGTGACGATAGTGATGATGGAATCAAGGTTACCAATGAGAAGCTTCGTGCTGTTATCCGCAAGAGCAAAGAGGTGTTGGAGATCCATCGGAATCTACTTGAGAAGATATCGGCATCAGAAAGGAAGAAGATCACTTCAATTATAGAGGACAGTTCCATTTATAATGAGCAAGATCCATTTGGTCAAAGAGATAGTTCTTTTTATCATCTTGATGAAGTTCCAGACGATGATGAATTTAGCTATGACCTACAGATGTACCTTGATAGACGTCCAGATCAATCTGAAGTTGTTGCAACTCAGGATTATGAGGCACAACTAAGTCAAATAAGTGAAATGGGACAGTCAGTTGCTGAGGGCACTAGTGATGATCCATCTGCTTCAGCTGCTGTAGATCTTATCAATATCATATTGGTAGCGGCGGAGTGTGCTCCTTGGTCCAAAACAGGTGGGCTTGGAGATGTTGCTGGAGCTTTGCCAAAGGCTTTGGCTAGGAGAGGTCACCGTGTCATGGTAGTAGTGCCAATGTATAAAAACTACGCAGAACCTCAACAGCTAGGAGAGCCAAGGAGATACCAGGTTGCAGGGCAGGATATGGAGGTAATTTATTATCATGCATACATAGATGGTGTGGATTTTGTTTTCATTGACAATCCTATCTTCCACCACGTTGAGAATGACATTTATGGCGGAGACCGAACAGACATCTTAAAACGGATGGTTTTGTTGTGCAAAGCGGCTATAGAGGTTCCATGGTATGTTCCTTGTGGTGGCTACTGCTACGGTGATGGAAATCTTGTGTTCCTTGCAAATGATTGGCATACTGCACTACTGCCTGTTTATTTGAAGGCATACTATCATGACAATGGTTTCATGATATATGCCCGTTCTGTTCTTGTCATACACAATATAGCACATCAGGGTCGTGGCCCATTAGATGACTTCAGTTATCTGGATTTGCCAGTTGATTACATGGATCTTTTCAAACTTTATGACCCATTTGGGGGTGATCACCTAAACATATTTGCAGCTGGTATTAAAGCTGCTGACCGTTTGCTTACTGTAAGCCATGGTTATGCATGGGAGCTCAAAACAGCTGAAGGTGGTTGGGGTCTTCATGGGATCATCAATGAAAGCGATTGGAAATTTCAGGGCATTGTAAATGGCATTGATACAACTGATTGGAATCCTAGGTGTGATATCCACCTAAAATCTGATGGGTACACCAATTATTCTCTAGAAACAGTTCAGGCAGGTAAACAGCAATGTAAGGCAGCATTGCAGAAGGAACTTGGTCTCCCAGTTCGTGGCGATGTTCCTGTCATTGCTTTCATTGGACGGCTAGACCATCAAAAAGGTGTAGACCTTATAGCAGAAGCAATGCCATGGATTGCTGGCCAAGATGTACAGTTAATAATGTTGGGCACTGGACGGCAAGACCTCGAAGATACATTGAGGAGGCTTGAGAGCCAACATTACGATAGAGTTAGGGGGTGGGTTGGTTTTTCCATCAGGTTGGCTCATCGAATGACAGCAGGGGCTGATATACTATTGATGCCATCAAGGTTTGAGCCATGTGGATTGAATCAGCTCTATGCCATGATGTATGGGACTGTCCCAGTAGTCCATGCGGTCGGTGGTCTTCGAGACACCGTTGAGCACTACAATCCCTACGAGGAGTCCGGACTTGGTTGGACTTTTGAAAAGGCAGAGGCAAACAGACTGATTGATGCTCTAGGGCACTGCTTGAACACGTACAGGAACTACAGGACTAGTTGGGAGGGACTCCAAAAGAGAGGGATGATGCAAGATCTAAGTTGGGATAATGCTGCTAAGCTGTATGAGGAAGTCCTCCTAGCTGCCAAGTATCAATGGTGATCAGTCCAAGAAGACCTCGACGGTTGTTCAGTCATTCATGACCGAAATGCCTTTTTCTCGTGTCAGCTGCTCAGATGCGGCCACCATCTAGTTCCATGGCTTACATCTTCCTGTGATTTGGATGAACAGAGTTTTTTTGTCAGATCTGACATCATTTTCAAGAAGGCACATGATGAACCTACTTCCCAGGTGAATACAGCAGCGGACGATGCCTTTGTTGGAAGGTGGCAAAACACATGGAAGATTCAGCCGTCTGCCAGCATGCACCTCTGTCCTAAGGAGAGGCTCCAAGCCCCATTGTGCGCTCTGGAGAGGCTCCAAACCACCATTGTTCGCCCCTGGGTAGGTTGTTGAGCTCGGTTAGATGCTTTTAGTACAGTAGAATAGCAGATACTAGCGGATAGACTAGTTGATATTTCCCCTATGCACCGAGTGGTTCGGTTGTACCTTATTTTTTTCTTGGCTCTTGTTGTCCAGTTCTTCGATCTTTAGACGATTAGCGTCCCGGGATTTCCCAGATGACATTGACATTGATACTAGTGGGAATTTCCCCTGCAAATTTACTGTCAGCTTTTCCATTGGTCTGCAGCTATGATCAGTTAAACCCGTGGATCCCA
CDS Sequence
- >LOC_Os10g30156.1 CDS ATGGCGGCGGCGGCCGTCTCCTCCCTCCTCGCCCCTTCGGGATCCTGCTACTCCCCCGGATGCCACAGCTGCTGGGGTCCCGGGCCCGGAGGCGGGCGGCGCCTACCTTCCCCGCGCCGGCGCCCGATTACCGCCGCGGCTCGCCCTACTTGGGCAGTGCCGAGGAGGAGCAGGTTGGAGTGGGGGCGTGTGGAGGCTCAGAATTCGGGCGCTCGCACCAGCTGCCGAGCAGCACTGCAATGGCTATCATCCACGGCAAGGTCCCATGTGAATGTTGGTTATGGGTCGCCGCTGGTGTTCCCAGGTTTGACCAAACCGGGGTCAAGCAGGTGTCTATGCGTTGTTGGAATGGTCGGCAATGCAGGGAATCAAGTTGGTGACGATAGTGATGATGGAATCAAGGTTACCAATGAGAAGCTTCGTGCTGTTATCCGCAAGAGCAAAGAGGTGTTGGAGATCCATCGGAATCTACTTGAGAAGATATCGGCATCAGAAAGGAAGAAGATCACTTCAATTATAGAGGACAGTTCCATTTATAATGAGCAAGATCCATTTGGTCAAAGAGATAGTTCTTTTTATCATCTTGATGAAGTTCCAGACGATGATGAATTTAGCTATGACCTACAGATGTACCTTGATAGACGTCCAGATCAATCTGAAGTTGTTGCAACTCAGGATTATGAGGCACAACTAAGTCAAATAAGTGAAATGGGACAGTCAGTTGCTGAGGGCACTAGTGATGATCCATCTGCTTCAGCTGCTGTAGATCTTATCAATATCATATTGGTAGCGGCGGAGTGTGCTCCTTGGTCCAAAACAGGTGGGCTTGGAGATGTTGCTGGAGCTTTGCCAAAGGCTTTGGCTAGGAGAGGTCACCGTGTCATGGTAGTAGTGCCAATGTATAAAAACTACGCAGAACCTCAACAGCTAGGAGAGCCAAGGAGATACCAGGTTGCAGGGCAGGATATGGAGGTAATTTATTATCATGCATACATAGATGGTGTGGATTTTGTTTTCATTGACAATCCTATCTTCCACCACGTTGAGAATGACATTTATGGCGGAGACCGAACAGACATCTTAAAACGGATGGTTTTGTTGTGCAAAGCGGCTATAGAGGTTCCATGGTATGTTCCTTGTGGTGGCTACTGCTACGGTGATGGAAATCTTGTGTTCCTTGCAAATGATTGGCATACTGCACTACTGCCTGTTTATTTGAAGGCATACTATCATGACAATGGTTTCATGATATATGCCCGTTCTGTTCTTGTCATACACAATATAGCACATCAGGGTCGTGGCCCATTAGATGACTTCAGTTATCTGGATTTGCCAGTTGATTACATGGATCTTTTCAAACTTTATGACCCATTTGGGGGTGATCACCTAAACATATTTGCAGCTGGTATTAAAGCTGCTGACCGTTTGCTTACTGTAAGCCATGGTTATGCATGGGAGCTCAAAACAGCTGAAGGTGGTTGGGGTCTTCATGGGATCATCAATGAAAGCGATTGGAAATTTCAGGGCATTGTAAATGGCATTGATACAACTGATTGGAATCCTAGGTGTGATATCCACCTAAAATCTGATGGGTACACCAATTATTCTCTAGAAACAGTTCAGGCAGGTAAACAGCAATGTAAGGCAGCATTGCAGAAGGAACTTGGTCTCCCAGTTCGTGGCGATGTTCCTGTCATTGCTTTCATTGGACGGCTAGACCATCAAAAAGGTGTAGACCTTATAGCAGAAGCAATGCCATGGATTGCTGGCCAAGATGTACAGTTAATAATGTTGGGCACTGGACGGCAAGACCTCGAAGATACATTGAGGAGGCTTGAGAGCCAACATTACGATAGAGTTAGGGGGTGGGTTGGTTTTTCCATCAGGTTGGCTCATCGAATGACAGCAGGGGCTGATATACTATTGATGCCATCAAGGTTTGAGCCATGTGGATTGAATCAGCTCTATGCCATGATGTATGGGACTGTCCCAGTAGTCCATGCGGTCGGTGGTCTTCGAGACACCGTTGAGCACTACAATCCCTACGAGGAGTCCGGACTTGGTTGGACTTTTGAAAAGGCAGAGGCAAACAGACTGATTGATGCTCTAGGGCACTGCTTGAACACGTACAGGAACTACAGGACTAGTTGGGAGGGACTCCAAAAGAGAGGGATGATGCAAGATCTAAGTTGGGATAATGCTGCTAAGCTGTATGAGGAAGTCCTCCTAGCTGCCAAGTATCAATGGTGA
Protein Sequence
- >LOC_Os10g30156.1 protein MAAAAVSSLLAPSGSCYSPGCHSCWGPGPGGGRRLPSPRRRPITAAARPTWAVPRRSRLEWGRVEAQNSGARTSCRAALQWLSSTARSHVNVGYGSPLVFPGLTKPGSSRCLCVVGMVGNAGNQVGDDSDDGIKVTNEKLRAVIRKSKEVLEIHRNLLEKISASERKKITSIIEDSSIYNEQDPFGQRDSSFYHLDEVPDDDEFSYDLQMYLDRRPDQSEVVATQDYEAQLSQISEMGQSVAEGTSDDPSASAAVDLINIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVVPMYKNYAEPQQLGEPRRYQVAGQDMEVIYYHAYIDGVDFVFIDNPIFHHVENDIYGGDRTDILKRMVLLCKAAIEVPWYVPCGGYCYGDGNLVFLANDWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGRGPLDDFSYLDLPVDYMDLFKLYDPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTAEGGWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVEHYNPYEESGLGWTFEKAEANRLIDALGHCLNTYRNYRTSWEGLQKRGMMQDLSWDNAAKLYEEVLLAAKYQW*