Gene Details:
- MSU gene ID: LOC_Os10g42240
- RAPdb gene ID: Os10g0573000
- Gene Symbol: PFKB1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Here, we report the involvement of a PCK protein PFKB1 in chloroplast development by identification of a new rice mutant, revertible early yellowing Kitaake 2 [rey(k2)].
- The PFKB1 gene is ubiquitously expressed, and its protein is mainly targeted to the chloroplast and, in some cells, to the nucleus.
- Taken together, our study suggests that PFKB1 functions as a novel regulator indispensable for early chloroplast development, at least partly by regulating chloroplast-associated genes.
Function-related keywords:
Literature:
- A phosphofructokinase B-type carbohydrate kinase family protein, PFKB1, is essential for chloroplast development at early seedling stage in rice . DOI: 10.1016/j.plantsci.2019.110295 ; PMID: 31779907
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os10g42240.1 cDNA GGCGAGGTCGGGATGCGTGGCGATAGATAGAGAAGAGACGAGAGGTTGGGGTGGGCGGCCGCGGGAGCTCCACGGCATCGATCGCCATCCTCTCCTCCGCAACAATGGCGCTCGCCTCCTCCTCCCGCCTCCTCCACCGCTTCTCCTCCTCCTCTCTGCCGCGACCCTGCCGGCGACGGGTACCCAGGCCACGCGGCCACAGCCGCTTCGCCGTGCGGTGGGAGCACCGGGCGGCGGCGGTGGTGCTGCTGCTGCCGAGAGCTCTCCTCGGAGGAGGATTCCAGGATGCCGATGCGGCTGAGAGTGACGACGAGGAGGAGGAGGATGCCCATGGCGTCCTGCGCCCGCTCGACGCTGACGACGTCAACCTCGACCTCCACGCGCCTCCCTCCGGCCCCGAGCGCTGGGACGTCCTCGGCCTCGGCCAGGCCATGGTTGATTTCTCAGGGATGGTGGACGACGAGTTCCTTCACAGATTGGGCATACAAAAGGGTACCAGAAAGGTTGTCAACCACGAGGAGAGAGGGCGTGTCTTGCGCGCCATGGATGGTTGCAGCTACAAGGCTGCCGCTGGAGGCTCACTGTCCAACTCGCTTGTCGCGCTATCAAGGCTTGGTAGTAGCCGCTCCACTAACTACCCCGAGCTTAGAATCGCGATGGCTGGCAGTGTGGGCAGCGACCCACTTGGTAGTTTTTACAGGGCAAAATTGCGCCGTGCTAATTTGCATTTCTTGTCTAAGCCGGTCAAAGATGGGACTACTGGAACTGTGATTGTTCTAACAACTCCAGATGCACAACGAACTATGCTTGCATATCAGGGAACATCGTCAACTTTGAGTTATGATTCAGATTTGGCCAGTCTAGTGTCCAAGTCAAATGTAGTAATTGTGGAAGGCTACCTATTTGAGCTACCTCACACGATCGAAGCCATCAAGCAAGCATGTGAAGATGCTCATAAGAATGGCTCACTTATTGCAGTTACAGCATCAGATGTGTCATGCATCAAGCGTTGCTACAATGATTTTTGGGATATTGTAACAAACTATGCGGACATATTATTCGCCAATGCCAATGAAGCGAGGGCATTCTGCGAGCTAAGCTCAACAGATAGCCCCATGTCAGCGGCAAGATACTTAAGCCATTCTGTTCCTCTAGTATCCGTGACAGATGGTGTGCACGGTTCATACATTGGAGTGAAAGGGGAAGCGATATACATCCCTCCACCACCATGTGTACCTATAGATACATGTGGGGCTGGTGATGCATACGCTTCAGGGATTCTATATGGCATTCTTCGGGGCTCTTCGGATTTGAAGAGCATTGGCCTGCTCGCTTCGCGAGTAGCTGCTATTGTCGTTGCGCAGCAAGGTACACGCTTACGGGTTCAGGACGCCGACAGATTGGCCGAATCATTCACACTTCACCTAGATAACCTGGAGTTTTGTTCAGATATTGAAACAGACCATGTTTCAAACTTCTGATCGTTTTAGCTGAAAGTCGTAGGACTTCCATTTGTATATAGCATCTGTTTACTTTTAGGCCTAGCTAGCTCATTGTTCAGTACAGCTGAGCTACCCAGCTTGTCAGTCCTTTCAGACGTTTGTTACAATTTCATTCCTTAAATTTGGTTCCAGAAAAGGATGCTACATACTTCATGGATTTCATATTGAACTGAAGATATTACTCCTAGATAAGGCAGTGGCAATAGTTCATGTGCTTTCATTGGTTCTTGTGTACACTCAAGATACATGACATATTTTTTATAGATAATGAGAGACATGACATATAATCTTGGTCTGTTTAGAATGTGGTCCACTGAAATCGCATTGAAATGAAGAGAAAATGTTGTTAGTGCCA
- >LOC_Os10g42240.2 cDNA GGCGAGGTCGGGATGCGTGGCGATAGATAGAGAAGAGACGAGAGGTTGGGGTGGGCGGCCGCGGGAGCTCCACGGCATCGATCGCCATCCTCTCCTCCGCAACAATGGCGCTCGCCTCCTCCTCCCGCCTCCTCCACCGCTTCTCCTCCTCCTCTCTGCCGCGACCCTGCCGGCGACGGGTACCCAGGCCACGCGGCCACAGCCGCTTCGCCGTGCGGTGGGAGCACCGGGCGGCGGCGGTGGTGCTGCTGCTGCCGAGAGCTCTCCTCGGAGGAGGATTCCAGGATGCCGATGCGGCTGAGAGTGACGACGAGGAGGAGGAGGATGCCCATGGCGTCCTGCGCCCGCTCGACGCTGACGACGTCAACCTCGACCTCCACGCGCCTCCCTCCGGCCCCGAGCGCTGGGACGTCCTCGGCCTCGGCCAGGCCATGGTTGATTTCTCAGGGATGGTGGACGACGAGTTCCTTCACAGATTGGGCATACAAAAGGGTACCAGAAAGGTTGTCAACCACGAGGAGAGAGGGCGTGTCTTGCGCGCCATGGATGGTTGCAGCTACAAGGCTGCCGCTGGAGGCTCACTGTCCAACTCGCTTGTCGCGCTATCAAGGCTTGGTAGTAGCCGCTCCACTAACTACCCCGAGCTTAGAATCGCGATGGCTGGCAGTGTGGGCAGCGACCCACTTGGTAGTTTTTACAGGGCAAAATTGCGCCGTGCTAATTTGCATTTCTTGTCTAAGCCGGTCAAAGATGGGACTACTGGAACTGTGATTGTTCTAACAACTCCAGATGCACAACGAACTATGCTTGCATATCAGGGAACATCGTCAACTTTGAGTTATGATTCAGATTTGGCCAGTCTAGTGTCCAAGTCAAATGTAGTAATTGTGGAAGGCTACCTATTTGAGCTACCTCACACGATCGAAGCCATCAAGCAAGCATGTGAAGATGCTCATAAGAATGGCTCACTTATTGCAGTTACAGCATCAGATGTGTCATGCATCAAGCGTTGCTACAATGATTTTTGGGATATTGTAACAAACTATGCGGACATATTATTCGCCAATGCCAATGAAGCGAGGGCATTCTGCGAGCTAAGCTCAACAGATAGCCCCATGTCAGCGGCAAGATACTTAAGCCATTCTGTTCCTCTAGTATCCGTGACAGATGGTGTGCACGGTTCATACATTGGAGTGAAAGGGGAAGCGATATACATCCCTCCACCACCATGTGTACCTATAGATACATGTGGGGCTGGTGATGCATACGCTTCAGGGATTCTATATGGCATTCTTCGGGGCTCTTCGGATTTGAAGAGCATTGGCCTGCTCGCTTCGCGAGTAGCTGCTATTGTCGTTGCGCAGCAAGGTACACGCTTACGGGTTCAGGACGCCGACAGATTGGCCGAATCATTCACACTTCACCTAGATAACCTGGAGTTTTGTTCAGATATTGAAACAGACCATGTTTCAAACTTCTGATCGTTTTAGCTGAAAGTCGTAGGACTTCCATTTGTATATAGCATCTGTTTACTTTTAGGCCTAGCTAGCTCATTGTTCAGTACAGCTGAGCTACCCAGCTTGTCAGTCCTTTCAGACGTTTGTTACAATTTCATTCCTTAAATTTGGTTCCAGAAAAGGATGCTACATACTTCATGGATTTCATATTGAACTGAAGATATTACTCCTAGATAAGGCAGTGGCAATAGTTCATGTGCTTTCATTGGTTCTTGTGTACACTCAAGATACATGACATATTTTTTATAGATAATGAGAGACATGACATATAATCTTGGTCTGTTTAGAATGTGGTCCACTGAAATCGCATTGAAATGAAGAGAAAATGTTGTTAGTGCCA
CDS Sequence
- >LOC_Os10g42240.1 CDS ATGGCGCTCGCCTCCTCCTCCCGCCTCCTCCACCGCTTCTCCTCCTCCTCTCTGCCGCGACCCTGCCGGCGACGGGTACCCAGGCCACGCGGCCACAGCCGCTTCGCCGTGCGGTGGGAGCACCGGGCGGCGGCGGTGGTGCTGCTGCTGCCGAGAGCTCTCCTCGGAGGAGGATTCCAGGATGCCGATGCGGCTGAGAGTGACGACGAGGAGGAGGAGGATGCCCATGGCGTCCTGCGCCCGCTCGACGCTGACGACGTCAACCTCGACCTCCACGCGCCTCCCTCCGGCCCCGAGCGCTGGGACGTCCTCGGCCTCGGCCAGGCCATGGTTGATTTCTCAGGGATGGTGGACGACGAGTTCCTTCACAGATTGGGCATACAAAAGGGTACCAGAAAGGTTGTCAACCACGAGGAGAGAGGGCGTGTCTTGCGCGCCATGGATGGTTGCAGCTACAAGGCTGCCGCTGGAGGCTCACTGTCCAACTCGCTTGTCGCGCTATCAAGGCTTGGTAGTAGCCGCTCCACTAACTACCCCGAGCTTAGAATCGCGATGGCTGGCAGTGTGGGCAGCGACCCACTTGGTAGTTTTTACAGGGCAAAATTGCGCCGTGCTAATTTGCATTTCTTGTCTAAGCCGGTCAAAGATGGGACTACTGGAACTGTGATTGTTCTAACAACTCCAGATGCACAACGAACTATGCTTGCATATCAGGGAACATCGTCAACTTTGAGTTATGATTCAGATTTGGCCAGTCTAGTGTCCAAGTCAAATGTAGTAATTGTGGAAGGCTACCTATTTGAGCTACCTCACACGATCGAAGCCATCAAGCAAGCATGTGAAGATGCTCATAAGAATGGCTCACTTATTGCAGTTACAGCATCAGATGTGTCATGCATCAAGCGTTGCTACAATGATTTTTGGGATATTGTAACAAACTATGCGGACATATTATTCGCCAATGCCAATGAAGCGAGGGCATTCTGCGAGCTAAGCTCAACAGATAGCCCCATGTCAGCGGCAAGATACTTAAGCCATTCTGTTCCTCTAGTATCCGTGACAGATGGTGTGCACGGTTCATACATTGGAGTGAAAGGGGAAGCGATATACATCCCTCCACCACCATGTGTACCTATAGATACATGTGGGGCTGGTGATGCATACGCTTCAGGGATTCTATATGGCATTCTTCGGGGCTCTTCGGATTTGAAGAGCATTGGCCTGCTCGCTTCGCGAGTAGCTGCTATTGTCGTTGCGCAGCAAGGTACACGCTTACGGGTTCAGGACGCCGACAGATTGGCCGAATCATTCACACTTCACCTAGATAACCTGGAGTTTTGTTCAGATATTGAAACAGACCATGTTTCAAACTTCTGA
- >LOC_Os10g42240.2 CDS ATGGCGCTCGCCTCCTCCTCCCGCCTCCTCCACCGCTTCTCCTCCTCCTCTCTGCCGCGACCCTGCCGGCGACGGGTACCCAGGCCACGCGGCCACAGCCGCTTCGCCGTGCGGTGGGAGCACCGGGCGGCGGCGGTGGTGCTGCTGCTGCCGAGAGCTCTCCTCGGAGGAGGATTCCAGGATGCCGATGCGGCTGAGAGTGACGACGAGGAGGAGGAGGATGCCCATGGCGTCCTGCGCCCGCTCGACGCTGACGACGTCAACCTCGACCTCCACGCGCCTCCCTCCGGCCCCGAGCGCTGGGACGTCCTCGGCCTCGGCCAGGCCATGGTTGATTTCTCAGGGATGGTGGACGACGAGTTCCTTCACAGATTGGGCATACAAAAGGGTACCAGAAAGGTTGTCAACCACGAGGAGAGAGGGCGTGTCTTGCGCGCCATGGATGGTTGCAGCTACAAGGCTGCCGCTGGAGGCTCACTGTCCAACTCGCTTGTCGCGCTATCAAGGCTTGGTAGTAGCCGCTCCACTAACTACCCCGAGCTTAGAATCGCGATGGCTGGCAGTGTGGGCAGCGACCCACTTGGTAGTTTTTACAGGGCAAAATTGCGCCGTGCTAATTTGCATTTCTTGTCTAAGCCGGTCAAAGATGGGACTACTGGAACTGTGATTGTTCTAACAACTCCAGATGCACAACGAACTATGCTTGCATATCAGGGAACATCGTCAACTTTGAGTTATGATTCAGATTTGGCCAGTCTAGTGTCCAAGTCAAATGTAGTAATTGTGGAAGGCTACCTATTTGAGCTACCTCACACGATCGAAGCCATCAAGCAAGCATGTGAAGATGCTCATAAGAATGGCTCACTTATTGCAGTTACAGCATCAGATGTGTCATGCATCAAGCGTTGCTACAATGATTTTTGGGATATTGTAACAAACTATGCGGACATATTATTCGCCAATGCCAATGAAGCGAGGGCATTCTGCGAGCTAAGCTCAACAGATAGCCCCATGTCAGCGGCAAGATACTTAAGCCATTCTGTTCCTCTAGTATCCGTGACAGATGGTGTGCACGGTTCATACATTGGAGTGAAAGGGGAAGCGATATACATCCCTCCACCACCATGTGTACCTATAGATACATGTGGGGCTGGTGATGCATACGCTTCAGGGATTCTATATGGCATTCTTCGGGGCTCTTCGGATTTGAAGAGCATTGGCCTGCTCGCTTCGCGAGTAGCTGCTATTGTCGTTGCGCAGCAAGGTACACGCTTACGGGTTCAGGACGCCGACAGATTGGCCGAATCATTCACACTTCACCTAGATAACCTGGAGTTTTGTTCAGATATTGAAACAGACCATGTTTCAAACTTCTGA
Protein Sequence
- >LOC_Os10g42240.1 protein MALASSSRLLHRFSSSSLPRPCRRRVPRPRGHSRFAVRWEHRAAAVVLLLPRALLGGGFQDADAAESDDEEEEDAHGVLRPLDADDVNLDLHAPPSGPERWDVLGLGQAMVDFSGMVDDEFLHRLGIQKGTRKVVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALSRLGSSRSTNYPELRIAMAGSVGSDPLGSFYRAKLRRANLHFLSKPVKDGTTGTVIVLTTPDAQRTMLAYQGTSSTLSYDSDLASLVSKSNVVIVEGYLFELPHTIEAIKQACEDAHKNGSLIAVTASDVSCIKRCYNDFWDIVTNYADILFANANEARAFCELSSTDSPMSAARYLSHSVPLVSVTDGVHGSYIGVKGEAIYIPPPPCVPIDTCGAGDAYASGILYGILRGSSDLKSIGLLASRVAAIVVAQQGTRLRVQDADRLAESFTLHLDNLEFCSDIETDHVSNF*
- >LOC_Os10g42240.2 protein MALASSSRLLHRFSSSSLPRPCRRRVPRPRGHSRFAVRWEHRAAAVVLLLPRALLGGGFQDADAAESDDEEEEDAHGVLRPLDADDVNLDLHAPPSGPERWDVLGLGQAMVDFSGMVDDEFLHRLGIQKGTRKVVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALSRLGSSRSTNYPELRIAMAGSVGSDPLGSFYRAKLRRANLHFLSKPVKDGTTGTVIVLTTPDAQRTMLAYQGTSSTLSYDSDLASLVSKSNVVIVEGYLFELPHTIEAIKQACEDAHKNGSLIAVTASDVSCIKRCYNDFWDIVTNYADILFANANEARAFCELSSTDSPMSAARYLSHSVPLVSVTDGVHGSYIGVKGEAIYIPPPPCVPIDTCGAGDAYASGILYGILRGSSDLKSIGLLASRVAAIVVAQQGTRLRVQDADRLAESFTLHLDNLEFCSDIETDHVSNF*