Gene Details:
- MSU gene ID: LOC_Os11g34210
- RAPdb gene ID: Os11g0544800
- Gene Symbol: OsGatB
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- In the root, OsGatB was predominantly expressed in the root tip and played an important role in cell division and elongation there.
- OsGatB was localized in the mitochondria, and mitochondrial structure and function were all affected in OsGatB root tip cells.
Function-related keywords:
Literature:
- OsGatB, the Subunit of tRNA-Dependent Amidotransferase, Is Required for Primary Root Development in Rice . DOI: 10.3389/fpls.2016.00599 ; PMID: 27200067
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os11g34210.1 cDNA ATATTTCGTCCATAAACCCTCTGACTGGTGGACCCTCTCATATCCTTTTTCCCACTCCCCTCTATCCACTGTTTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCCGCCGCGCCGGCGTTCTCCCCCCGCCGACGAAGCACGGCGTGGAGTGTAGACGCAGCCTCCTCGCTCTCTCTCACGCCGGCGAGCAGGGTCTGGAGCCAGGAGCGACGCGGCGGCCGGGGCCGGGGCCTCCATCTCGGTTCGAACCGCACTGAAGGTCCCTCCCTGCATTAGGGCGCACAATGGCACTGACCCTTCTCAGAGGGATGCGAACGCCGGTTGTAGCTAGAAGGAATGCTGGCTTGTTCTTCACCACATTGCAGTCTCCGTTGTTGTCCCGCTTCACGATGAGAGCGGAGAGCGCGCGGGCCGCAGCGCCCAAGTCGATTCAGCTGGCGACCAAGGAGGCGGCGGAGCAGAAGGCGCAGGGCTTCGAGGCGGTCATCGGGATCGAGACCCATGTCCAGCTCTCGACGGTCACAAAGGCGTTCTGCTCGTGCCCGTACAGCTACGGGTCGCAGCCGAACAGCACCGTCTGCCCCACCTGCATGGGGCACCCCGGAACGCTGCCCGTTCTTAACGCAAAGGTTGTCGAATGCGCCGTGAGGTTGGGCCTCGCTCTCAATTGCGAGATCGCGATGACGTCCAAGTTTGATCGGAAGCAGTACTTCTACCCGGACCTGCCCAAGGGGTATCAGATTTCGCAGTTTGACATTCCCATTGCCAAGGAGGGTTACCTTGATTTGGATCTTCCGGTGGAGTTCGGCGGTGGGCATAGGAGATTTGGGGTCACAAGGGTGCATATGGAAGAAGATGCTGGCAAGCTGCTTCACTCTGAATCCGGGAGTTACTCTCAGGTTGACTTAAATAGGGCTGGCGTTCCTTTACTTGAAATTGTCTCAGAGCCAGATATGAGAACAGGGATAGAGGCTGCCGAGTATGGTGCTGAGCTACAGAGGCTTGTTAGGTACCTGGGCGTGAGTAATGGTAACATGCAGGAAGGTTCCCTTCGCTGTGATGTGAATGTTTCTGTTCGGCCAATTGGACAATCAAATTTTGGTACAAAGGTTGAAATAAAGAATATGAATTCATTTTCTGCAATAAGTAGGGCAATAGATTATGAGATCTCCCGGCAGATTCTTCTTCATAAAGAAGGTCAGGCTGATCAAATTGTACAAGAAACCCGGCTGTGGGATGAATCTTCTCAGAAAACTTTTACAATGCGAAAAAAGGAGGGACTTGCTGATTATAGATATTTTCCTGAGCCTGATCTTCCTGAAGTTGTTCTTACTAGTGAGTACATTGATGAAATTCAAAACTCAATGCCAGAGCTTCCTGAAGCAAAGCGTAGGCGCTTCGAGAATATGGGACTCAGCATGCAAGATGTTCTTTTCCTTGCTAATGACGATAATGTTGCTCGGTTCTTCGATTCTACCCTTGAGCACGGCGCGGATGCAAAGCTGGCTGCCAACTGGATCATGGGTGACATTGCTGCTTATTTGAAAAATGAAAAACTTTCCATTGATGAAATTAAATTAACACCTCTGGAGCTTTCTGAATTGATTGCATCTATAAGGAATGGAACTATCAGTGGGAAGATTGGAAAGGAGATTCTGATTGAACTCATTGCGAAAGGTGGAACTGTCAAGTCTGTGATAGAGGAGAAAGATTTGGTTCAGATAGCAGATCCTGCAGCAATTGAGGCAATGGTAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTAAACCCTGCAATTTGGGGTCTATTTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGTAAATGTTACTACTTTGTGGGTAGTTTATTTTTCTTCTTTTCTGAAAGAAAATTTTGTAAAAGCAGCATAATTTACATAATAAAAAGATGAATATTTATGCATCCAATTAA
- >LOC_Os11g34210.2 cDNA ATATTTCGTCCATAAACCCTCTGACTGGTGGACCCTCTCATATCCTTTTTCCCACTCCCCTCTATCCACTGTTTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCCGCCGCGCCGGCGTTCTCCCCCCGCCGACGAAGCACGGCGTGGAGTGTAGACGCAGCCTCCTCGCTCTCTCTCACGCCGGCGAGCAGGGTCTGGAGCCAGGAGCGACGCGGCGGCCGGGGCCGGGGCCTCCATCTCGGTTCGAACCGCACTGAAGGTCCCTCCCTGCATTAGGGCGCACAATGGCACTGACCCTTCTCAGAGGGATGCGAACGCCGGTTGTAGCTAGAAGGAATGCTGGCTTGTTCTTCACCACATTGCAGTCTCCGTTGTTGTCCCGCTTCACGATGAGAGCGGAGAGCGCGCGGGCCGCAGCGCCCAAGTCGATTCAGCTGGCGACCAAGGAGGCGGCGGAGCAGAAGGCGCAGGGCTTCGAGGCGGTCATCGGGATCGAGACCCATGTCCAGCTCTCGACGGTCACAAAGGCGTTCTGCTCGTGCCCGTACAGCTACGGGTCGCAGCCGAACAGCACCGTCTGCCCCACCTGCATGGGGCACCCCGGAACGCTGCCCGTTCTTAACGCAAAGGTTGTCGAATGCGCCGTGAGGTTGGGCCTCGCTCTCAATTGCGAGATCGCGATGACGTCCAAGTTTGATCGGAAGCAGTACTTCTACCCGGACCTGCCCAAGGGGTATCAGATTTCGCAGTTTGACATTCCCATTGCCAAGGAGGGTTACCTTGATTTGGATCTTCCGGTGGAGTTCGGCGGTGGGCATAGGAGATTTGGGGTCACAAGGGTGCATATGGAAGAAGATGCTGGCAAGCTGCTTCACTCTGAATCCGGGAGTTACTCTCAGGTTGACTTAAATAGGGCTGGCGTTCCTTTACTTGAAATTGTCTCAGAGCCAGATATGAGAACAGGGATAGAGGCTGCCGAGTATGGTGCTGAGCTACAGAGGCTTGTTAGGTACCTGGGCGTGAGTAATGGTAACATGCAGGAAGGTTCCCTTCGCTGTGATGTGAATGTTTCTGTTCGGCCAATTGGACAATCAAATTTTGGTACAAAGGTTGAAATAAAGAATATGAATTCATTTTCTGCAATAAGTAGGGCAATAGATTATGAGATCTCCCGGCAGATTCTTCTTCATAAAGAAGGTCAGGCTGATCAAATTGTACAAGAAACCCGGCTGTGGGATGAATCTTCTCAGAAAACTTTTACAATGCGAAAAAAGGAGGGACTTGCTGATTATAGATATTTTCCTGAGCCTGATCTTCCTGAAGTTGTTCTTACTAGTGAGTACATTGATGAAATTCAAAACTCAATGCCAGAGCTTCCTGAAGCAAAGCGTAGGCGCTTCGAGAATATGGGACTCAGCATGCAAGATGTTCTTTTCCTTGCTAATGACGATAATGTTGCTCGGTTCTTCGATTCTACCCTTGAGCACGGCGCGGATGCAAAGCTGGCTGCCAACTGGATCATGGGTGACATTGCTGCTTATTTGAAAAATGAAAAACTTTCCATTGATGAAATTAAATTAACACCTCTGGAGCTTTCTGAATTGATTGCATCTATAAGGAATGGAACTATCAGTGGGAAGATTGGAAAGGAGATTCTGATTGAACTCATTGCGAAAGGTGGAACTGTCAAGTCTGTGATAGAGGAGAAAGATTTGGTTCAGATAGCAGATCCTGCAGCAATTGAGGCAATGGTAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGAGGGGGTTTGTCGACAAACGGAGACTCATGTTGTAGTCCACGAGTGGACAATCGAACTAAACCCTGCAATTTGGGGTCTATTTTTCAATGATGAATTCTCTGTTAGCTCCAGTAGTTGTAAATGTTACTACTTTGTGGGTAGTTTATTTTTCTTCTTTTCTGAAAGAAAATTTTGTAAAAGCAGCATAATTTACATAATAAAAAGATGAATATTTATGCATCCAATTAA
CDS Sequence
- >LOC_Os11g34210.1 CDS ATGGCACTGACCCTTCTCAGAGGGATGCGAACGCCGGTTGTAGCTAGAAGGAATGCTGGCTTGTTCTTCACCACATTGCAGTCTCCGTTGTTGTCCCGCTTCACGATGAGAGCGGAGAGCGCGCGGGCCGCAGCGCCCAAGTCGATTCAGCTGGCGACCAAGGAGGCGGCGGAGCAGAAGGCGCAGGGCTTCGAGGCGGTCATCGGGATCGAGACCCATGTCCAGCTCTCGACGGTCACAAAGGCGTTCTGCTCGTGCCCGTACAGCTACGGGTCGCAGCCGAACAGCACCGTCTGCCCCACCTGCATGGGGCACCCCGGAACGCTGCCCGTTCTTAACGCAAAGGTTGTCGAATGCGCCGTGAGGTTGGGCCTCGCTCTCAATTGCGAGATCGCGATGACGTCCAAGTTTGATCGGAAGCAGTACTTCTACCCGGACCTGCCCAAGGGGTATCAGATTTCGCAGTTTGACATTCCCATTGCCAAGGAGGGTTACCTTGATTTGGATCTTCCGGTGGAGTTCGGCGGTGGGCATAGGAGATTTGGGGTCACAAGGGTGCATATGGAAGAAGATGCTGGCAAGCTGCTTCACTCTGAATCCGGGAGTTACTCTCAGGTTGACTTAAATAGGGCTGGCGTTCCTTTACTTGAAATTGTCTCAGAGCCAGATATGAGAACAGGGATAGAGGCTGCCGAGTATGGTGCTGAGCTACAGAGGCTTGTTAGGTACCTGGGCGTGAGTAATGGTAACATGCAGGAAGGTTCCCTTCGCTGTGATGTGAATGTTTCTGTTCGGCCAATTGGACAATCAAATTTTGGTACAAAGGTTGAAATAAAGAATATGAATTCATTTTCTGCAATAAGTAGGGCAATAGATTATGAGATCTCCCGGCAGATTCTTCTTCATAAAGAAGGTCAGGCTGATCAAATTGTACAAGAAACCCGGCTGTGGGATGAATCTTCTCAGAAAACTTTTACAATGCGAAAAAAGGAGGGACTTGCTGATTATAGATATTTTCCTGAGCCTGATCTTCCTGAAGTTGTTCTTACTAGTGAGTACATTGATGAAATTCAAAACTCAATGCCAGAGCTTCCTGAAGCAAAGCGTAGGCGCTTCGAGAATATGGGACTCAGCATGCAAGATGTTCTTTTCCTTGCTAATGACGATAATGTTGCTCGGTTCTTCGATTCTACCCTTGAGCACGGCGCGGATGCAAAGCTGGCTGCCAACTGGATCATGGGTGACATTGCTGCTTATTTGAAAAATGAAAAACTTTCCATTGATGAAATTAAATTAACACCTCTGGAGCTTTCTGAATTGATTGCATCTATAAGGAATGGAACTATCAGTGGGAAGATTGGAAAGGAGATTCTGATTGAACTCATTGCGAAAGGTGGAACTGTCAAGTCTGTGATAGAGGAGAAAGATTTGGTTCAGATAGCAGATCCTGCAGCAATTGAGGCAATGGTAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGA
- >LOC_Os11g34210.2 CDS ATGGCACTGACCCTTCTCAGAGGGATGCGAACGCCGGTTGTAGCTAGAAGGAATGCTGGCTTGTTCTTCACCACATTGCAGTCTCCGTTGTTGTCCCGCTTCACGATGAGAGCGGAGAGCGCGCGGGCCGCAGCGCCCAAGTCGATTCAGCTGGCGACCAAGGAGGCGGCGGAGCAGAAGGCGCAGGGCTTCGAGGCGGTCATCGGGATCGAGACCCATGTCCAGCTCTCGACGGTCACAAAGGCGTTCTGCTCGTGCCCGTACAGCTACGGGTCGCAGCCGAACAGCACCGTCTGCCCCACCTGCATGGGGCACCCCGGAACGCTGCCCGTTCTTAACGCAAAGGTTGTCGAATGCGCCGTGAGGTTGGGCCTCGCTCTCAATTGCGAGATCGCGATGACGTCCAAGTTTGATCGGAAGCAGTACTTCTACCCGGACCTGCCCAAGGGGTATCAGATTTCGCAGTTTGACATTCCCATTGCCAAGGAGGGTTACCTTGATTTGGATCTTCCGGTGGAGTTCGGCGGTGGGCATAGGAGATTTGGGGTCACAAGGGTGCATATGGAAGAAGATGCTGGCAAGCTGCTTCACTCTGAATCCGGGAGTTACTCTCAGGTTGACTTAAATAGGGCTGGCGTTCCTTTACTTGAAATTGTCTCAGAGCCAGATATGAGAACAGGGATAGAGGCTGCCGAGTATGGTGCTGAGCTACAGAGGCTTGTTAGGTACCTGGGCGTGAGTAATGGTAACATGCAGGAAGGTTCCCTTCGCTGTGATGTGAATGTTTCTGTTCGGCCAATTGGACAATCAAATTTTGGTACAAAGGTTGAAATAAAGAATATGAATTCATTTTCTGCAATAAGTAGGGCAATAGATTATGAGATCTCCCGGCAGATTCTTCTTCATAAAGAAGGTCAGGCTGATCAAATTGTACAAGAAACCCGGCTGTGGGATGAATCTTCTCAGAAAACTTTTACAATGCGAAAAAAGGAGGGACTTGCTGATTATAGATATTTTCCTGAGCCTGATCTTCCTGAAGTTGTTCTTACTAGTGAGTACATTGATGAAATTCAAAACTCAATGCCAGAGCTTCCTGAAGCAAAGCGTAGGCGCTTCGAGAATATGGGACTCAGCATGCAAGATGTTCTTTTCCTTGCTAATGACGATAATGTTGCTCGGTTCTTCGATTCTACCCTTGAGCACGGCGCGGATGCAAAGCTGGCTGCCAACTGGATCATGGGTGACATTGCTGCTTATTTGAAAAATGAAAAACTTTCCATTGATGAAATTAAATTAACACCTCTGGAGCTTTCTGAATTGATTGCATCTATAAGGAATGGAACTATCAGTGGGAAGATTGGAAAGGAGATTCTGATTGAACTCATTGCGAAAGGTGGAACTGTCAAGTCTGTGATAGAGGAGAAAGATTTGGTTCAGATAGCAGATCCTGCAGCAATTGAGGCAATGGTAGATCAAGTATTAGCTGATAATCCAAAGCAACTTGAGCAGTATCGGTCCGGGAAAACTAAATTGCAAGGATTTTTTGCTGGCCAGGTGATGAAAGCATCAAAGGGTAAAGCTAATCCTGTTTTGTTGAACAAAATCCTCGGGGAGAAATTGAAGGCCAATAGTTGA
Protein Sequence
- >LOC_Os11g34210.1 protein MALTLLRGMRTPVVARRNAGLFFTTLQSPLLSRFTMRAESARAAAPKSIQLATKEAAEQKAQGFEAVIGIETHVQLSTVTKAFCSCPYSYGSQPNSTVCPTCMGHPGTLPVLNAKVVECAVRLGLALNCEIAMTSKFDRKQYFYPDLPKGYQISQFDIPIAKEGYLDLDLPVEFGGGHRRFGVTRVHMEEDAGKLLHSESGSYSQVDLNRAGVPLLEIVSEPDMRTGIEAAEYGAELQRLVRYLGVSNGNMQEGSLRCDVNVSVRPIGQSNFGTKVEIKNMNSFSAISRAIDYEISRQILLHKEGQADQIVQETRLWDESSQKTFTMRKKEGLADYRYFPEPDLPEVVLTSEYIDEIQNSMPELPEAKRRRFENMGLSMQDVLFLANDDNVARFFDSTLEHGADAKLAANWIMGDIAAYLKNEKLSIDEIKLTPLELSELIASIRNGTISGKIGKEILIELIAKGGTVKSVIEEKDLVQIADPAAIEAMVDQVLADNPKQLEQYRSGKTKLQGFFAGQVMKASKGKANPVLLNKILGEKLKANS*
- >LOC_Os11g34210.2 protein MALTLLRGMRTPVVARRNAGLFFTTLQSPLLSRFTMRAESARAAAPKSIQLATKEAAEQKAQGFEAVIGIETHVQLSTVTKAFCSCPYSYGSQPNSTVCPTCMGHPGTLPVLNAKVVECAVRLGLALNCEIAMTSKFDRKQYFYPDLPKGYQISQFDIPIAKEGYLDLDLPVEFGGGHRRFGVTRVHMEEDAGKLLHSESGSYSQVDLNRAGVPLLEIVSEPDMRTGIEAAEYGAELQRLVRYLGVSNGNMQEGSLRCDVNVSVRPIGQSNFGTKVEIKNMNSFSAISRAIDYEISRQILLHKEGQADQIVQETRLWDESSQKTFTMRKKEGLADYRYFPEPDLPEVVLTSEYIDEIQNSMPELPEAKRRRFENMGLSMQDVLFLANDDNVARFFDSTLEHGADAKLAANWIMGDIAAYLKNEKLSIDEIKLTPLELSELIASIRNGTISGKIGKEILIELIAKGGTVKSVIEEKDLVQIADPAAIEAMVDQVLADNPKQLEQYRSGKTKLQGFFAGQVMKASKGKANPVLLNKILGEKLKANS*