Gene Details:
- MSU gene ID: LOC_Os12g04440
- RAPdb gene ID: Os12g0138900
- Gene Symbol: OsIPMS2
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- In this study, rice OsIPMS1 and OsIPMS2 was cloned, and the roles of OsIPMS1 in seed vigor were mainly investigated.
Function-related keywords:
Literature:
- Influence of isopropylmalate synthase OsIPMS1 on seed vigour associated with amino acid and energy metabolism in rice . DOI: 10.1111/pbi.12979 ; PMID: 29947463
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os12g04440.1 cDNA GTCTTCTTCGCCGCAAAAACCACGCCGCCATCACAGCATTCGTGCATCCCACGAAACCCCCGTTGTCATGTCCAGATAAGAGCTCCACCTCTGACTCACACACACATCACCGAGAAGCAGAGCAAGTGCATCTCCCTCTCCCACCATTTGATTCGATTCCCCTAAACCCCCGAGTCGTCGACGCCACAAACCCCGGCGACCACCATGGCCTCCTCCCTCCTCTCCTCCCCAAAACCCTCCTCCTTCTCCTCCGCAAACCCCACCTCCACTCCACGCCCACGCGCCCAAACTCTCTCCCCCTTCCGCGCCGCCGCCCCACGCTTCTCCCATGGCCTCGCCACCGCCGCCGCCGCCGCAAACCCTAGCGCCTCCCGCCGCTGCTACCACCGCGCCTTCGCCCGCCCCGTCCGGGCGTCCATGGCGCAGCCGCGGCGCCCGGAGTACGTCCCCAACCGCATCGACGACCCCAACTACGTCCGCATCTTCGACACCACCCTCCGCGACGGGGAGCAGTCCCCCGGGGCCACCATGACCAGCGCCGAGAAGCTCGTCGTCGCGCGCCAGCTCGCCCGCCTCGGCGTCGACATCATCGAGGCCGGGTTCCCGGCCTCCTCCCCCGACGACCTCGACGCCGTGCGCTCCATCGCCATCGAGGTCGGGAACACGCCCGTCGGGGAGGACGGCCACGTGCCGGTCATCTGTGGCCTCTCGAGATGCAATAAGCGAGACATTGATGCTGCCTGGGAGGCCGTGCGGCACGCGCGGCGGCCGCGCATCCACACCTTCATTGCCACCAGCGAGATCCATATGCAGCACAAGCTAAGGAAGACGCCCGAGCAGGTGGTGGCCATTGCCAAGGAAATGGTGGCCTACGCCCGCAGCCTAGGCTGCCCTGATGTCGAGTTCAGCCCTGAAGACGCTGGCAGGTCAAACAGAGAGTTTCTATATCATATACTAGAGGAAGTCATAAAAGCTGGAGCAACAACACTCAATATCCCAGACACTGTTGGATACACTCTTCCTTATGAATTTGGGAAACTAATTGCTGATATAAAAGCAAACACTCCAGGAATTGAAAATGCCATTATTTCTACTCATTGCCAGAATGACCTTGGTCTAGCAACCGCAAATACATTAGCGGGCGCTCATGCAGGAGCACGGCAATTAGAGGTGACTATCAATGGTATTGGTGAAAGGGCTGGAAATGCTTCTTTGGAAGAGGTTGTGATGGCAATTAAATGTCGTCGAGAACTCTTAGGAGGTCTGTATACTGGAATCAATACCCAACATATCACTATGTCAAGCAAAATGGTACAAGAGCACAGTGGACTTCATGTACAACCACATAAAGCTATTGTCGGTGCCAATGCCTTTGCACATGAAAGTGGAATTCATCAGGATGGGATGCTTAAGTACAAAGGAACTTATGAAATAATTTCTCCTGATGATATTGGTCTAACACGTGCAAATGAGTTTGGTATTGTTCTTGGGAAGCTCAGTGGAAGGCATGCTGTGAGATCTAAACTAGTGGAGCTTGGATATGAAATCACTGACAAGGAATTTGAGGATTTCTTTAAACGCTACAAAGAGGTTGCAGAGAAGAAAAAGCGTGTAACTGATGAAGACATTGAGGCGCTGTTGTCTGATGAGATATTTCAGCCCAAGGTTTTTTGGTCCCTTGCTGATGTACAGGCAACTTGTGGAACACTTGGTCTGTCTACAGCAACTGTCAAACTGATAGGTCCGGATGGAGATGAGAAGATTGCATGTGCAGTTGGAACAGGTCCAGTTGATGCAGCTTACAAGGCTGTTGATGATATAATACAGATCCCAACTGTTCTTCGAGAATATAGCATGACATCGGTCACAGAAGGCATTGATGCAATTGCAACTACTAGAGTGGTTGTCACTGGAGATGTCAGCGACTCTAAACATGCTTTGACTGGTCACTCCTTCAACCGGGCATTCAGTGGGAGTGGTGCCGCACTGGATATTGTTGTTTCCAGTGTGCGAGCTTACCTGAGTGCCCTGAACAAGATGTCCAGTTTTGTTGGGGCTATCAAGGCTAGTAGTGAAGTATCTGAAAGCCAAAGAGTTCAAACCACAGAATGAGTCTTGACGCTCCTTGGTTTTCATATCGGATGGTTCTATGTTTCACATTCCCAGCAAGGAGTATGTGCTTGTTGAAACATGGTTTTTCCGTTTAGTGCATCTGGAGGATGTTCTGGGTTTCTTTGGTGGAGCCTGACTTAAGGTTGAACATCCAGGAAGTTTTGGGGTATGTAGTGTATAATTCATATTTGAAAATTGTATTTCCAATAAGACAATAATAAATAATTGTTTGACATATGAGTATTGCAAAACTATTACTGTAAGAAATTAATCGTGAGACCAACCTACGGTTGTACAGTATCGAGAACTTCTGAATTGAGGGTCAGCATTTCGAGTT
- >LOC_Os12g04440.2 cDNA GTCTTCTTCGCCGCAAAAACCACGCCGCCATCACAGCATTCGTGCATCCCACGAAACCCCCGTTGTCATGTCCAGATAAGAGCTCCACCTCTGACTCACACACACATCACCGAGAAGCAGAGCAAGTGCATCTCCCTCTCCCACCATTTGATTCGATTCCCCTAAACCCCCGAGTCGTCGACGCCACAAACCCCGGCGACCACCATGGCCTCCTCCCTCCTCTCCTCCCCAAAACCCTCCTCCTTCTCCTCCGCAAACCCCACCTCCACTCCACGCCCACGCGCCCAAACTCTCTCCCCCTTCCGCGCCGCCGCCCCACGCTTCTCCCATGGCCTCGCCACCGCCGCCGCCGCCGCAAACCCTAGCGCCTCCCGCCGCTGCTACCACCGCGCCTTCGCCCGCCCCGTCCGGGCGTCCATGGCGCAGCCGCGGCGCCCGGAGTACGTCCCCAACCGCATCGACGACCCCAACTACGTCCGCATCTTCGACACCACCCTCCGCGACGGGGAGCAGTCCCCCGGGGCCACCATGACCAGCGCCGAGAAGCTCGTCGTCGCGCGCCAGCTCGCCCGCCTCGGCGTCGACATCATCGAGGCCGGGTTCCCGGCCTCCTCCCCCGACGACCTCGACGCCGTGCGCTCCATCGCCATCGAGGTCGGGAACACGCCCGTCGGGGAGGACGGCCACGTGCCGGTCATCTGTGGCCTCTCGAGATGCAATAAGCGAGACATTGATGCTGCCTGGGAGGCCGTGCGGCACGCGCGGCGGCCGCGCATCCACACCTTCATTGCCACCAGCGAGATCCATATGCAGCACAAGCTAAGGAAGACGCCCGAGCAGGTGGTGGCCATTGCCAAGGAAATGGTGGCCTACGCCCGCAGCCTAGGCTGCCCTGATGTCGAGTTCAGCCCTGAAGACGCTGGCAGGTCAAACAGAGAGTTTCTATATCATATACTAGAGGAAGTCATAAAAGCTGGAGCAACAACACTCAATATCCCAGACACTGTTGGATACACTCTTCCTTATGAATTTGGGAAACTAATTGCTGATATAAAAGCAAACACTCCAGGAATTGAAAATGCCATTATTTCTACTCATTGCCAGAATGACCTTGGTCTAGCAACCGCAAATACATTAGCGGGCGCTCATGCAGGAGCACGGCAATTAGAGGTGACTATCAATGGTATTGGTGAAAGGGCTGGAAATGCTTCTTTGGAAGAGGTTGTGATGGCAATTAAATGTCGTCGAGAACTCTTAGGAGGTCTGTATACTGGAATCAATACCCAACATATCACTATGTCAAGCAAAATGGTACAAGAGCACAGTGGACTTCATGTACAACCACATAAAGCTATTGTCGGTGCCAATGCCTTTGCACATGAAAGTGGAATTCATCAGGATGGGATGCTTAAGTACAAAGGAACTTATGAAATAATTTCTCCTGATGATATTGGTCTAACACGTGCAAATGAGTTTGGTATTGTTCTTGGGAAGCTCAGTGGAAGGCATGCTGTGAGATCTAAACTAGTGGAGCTTGGATATGAAATCACTGACAAGGAATTTGAGGATTTCTTTAAACGCTACAAAGAGGTTGCAGAGAAGAAAAAGCGTGTAACTGATGAAGACATTGAGGCGCTGTTGTCTGATGAGATATTTCAGCCCAAGGTTTTTTGGTCCCTTGCTGATGTACAGGCAACTTGTGGAACACTTGGTCTGTCTACAGCAACTGTCAAACTGATAGGTCCGGATGGAGATGAGAAGATTGCATGTGCAGTTGGAACAGGTCCAGTTGATGCAGCTTACAAGGCTGTTGATGATATAATACAGATCCCAACTGTTCTTCGAGAATATAGCATGACATCGGTCACAGAAGGCATTGATGCAATTGCAACTACTAGAGTGGTTGTCACTGGAGATGTCAGCGACTCTAAACATGCTTTGACTGGTCACTCCTTCAACCGGGCATTCAGTGGGAGTGGTGCCGCACTGGATATTGTTGTTTCCAGTGTGCGAGCTTACCTGAGTGCCCTGAACAAGATGTCCAGTTTTGTTGGGGCTATCAAGGCTAGTAGTGAAGTATCTGAAAGCCAAAGAGTTCAAACCACAGAATGAGTCTTGACGCTCCTTGGTTTTCATATCGGATGGTTCTATGTTTCACATTCCCAGCAAGGAGTATGTGCTTGTTGAAACATGGTTTTTCCGTTTAGTGCATCTGGAGGATGTTCTGGGTTTCTTTGGTGGAGCCTGACTTAAGGTTGAACATCCAGGAAGTTTTGGGGTATGTAGTGTATAATTCATATTTGAAAATTGTATTTCCAATAAGACAATAATAAATAATTGTTTGACATATGAGTATTGCAAAACTATTACTGTAAGAAATTAATCGTGAGACCAACCTACGGTTGTACAGTATCGAGAACTTCTGAATTGAGGGTCAGCATTTCGAGTT
CDS Sequence
- >LOC_Os12g04440.1 CDS ATGGCCTCCTCCCTCCTCTCCTCCCCAAAACCCTCCTCCTTCTCCTCCGCAAACCCCACCTCCACTCCACGCCCACGCGCCCAAACTCTCTCCCCCTTCCGCGCCGCCGCCCCACGCTTCTCCCATGGCCTCGCCACCGCCGCCGCCGCCGCAAACCCTAGCGCCTCCCGCCGCTGCTACCACCGCGCCTTCGCCCGCCCCGTCCGGGCGTCCATGGCGCAGCCGCGGCGCCCGGAGTACGTCCCCAACCGCATCGACGACCCCAACTACGTCCGCATCTTCGACACCACCCTCCGCGACGGGGAGCAGTCCCCCGGGGCCACCATGACCAGCGCCGAGAAGCTCGTCGTCGCGCGCCAGCTCGCCCGCCTCGGCGTCGACATCATCGAGGCCGGGTTCCCGGCCTCCTCCCCCGACGACCTCGACGCCGTGCGCTCCATCGCCATCGAGGTCGGGAACACGCCCGTCGGGGAGGACGGCCACGTGCCGGTCATCTGTGGCCTCTCGAGATGCAATAAGCGAGACATTGATGCTGCCTGGGAGGCCGTGCGGCACGCGCGGCGGCCGCGCATCCACACCTTCATTGCCACCAGCGAGATCCATATGCAGCACAAGCTAAGGAAGACGCCCGAGCAGGTGGTGGCCATTGCCAAGGAAATGGTGGCCTACGCCCGCAGCCTAGGCTGCCCTGATGTCGAGTTCAGCCCTGAAGACGCTGGCAGGTCAAACAGAGAGTTTCTATATCATATACTAGAGGAAGTCATAAAAGCTGGAGCAACAACACTCAATATCCCAGACACTGTTGGATACACTCTTCCTTATGAATTTGGGAAACTAATTGCTGATATAAAAGCAAACACTCCAGGAATTGAAAATGCCATTATTTCTACTCATTGCCAGAATGACCTTGGTCTAGCAACCGCAAATACATTAGCGGGCGCTCATGCAGGAGCACGGCAATTAGAGGTGACTATCAATGGTATTGGTGAAAGGGCTGGAAATGCTTCTTTGGAAGAGGTTGTGATGGCAATTAAATGTCGTCGAGAACTCTTAGGAGGTCTGTATACTGGAATCAATACCCAACATATCACTATGTCAAGCAAAATGGTACAAGAGCACAGTGGACTTCATGTACAACCACATAAAGCTATTGTCGGTGCCAATGCCTTTGCACATGAAAGTGGAATTCATCAGGATGGGATGCTTAAGTACAAAGGAACTTATGAAATAATTTCTCCTGATGATATTGGTCTAACACGTGCAAATGAGTTTGGTATTGTTCTTGGGAAGCTCAGTGGAAGGCATGCTGTGAGATCTAAACTAGTGGAGCTTGGATATGAAATCACTGACAAGGAATTTGAGGATTTCTTTAAACGCTACAAAGAGGTTGCAGAGAAGAAAAAGCGTGTAACTGATGAAGACATTGAGGCGCTGTTGTCTGATGAGATATTTCAGCCCAAGGTTTTTTGGTCCCTTGCTGATGTACAGGCAACTTGTGGAACACTTGGTCTGTCTACAGCAACTGTCAAACTGATAGGTCCGGATGGAGATGAGAAGATTGCATGTGCAGTTGGAACAGGTCCAGTTGATGCAGCTTACAAGGCTGTTGATGATATAATACAGATCCCAACTGTTCTTCGAGAATATAGCATGACATCGGTCACAGAAGGCATTGATGCAATTGCAACTACTAGAGTGGTTGTCACTGGAGATGTCAGCGACTCTAAACATGCTTTGACTGGTCACTCCTTCAACCGGGCATTCAGTGGGAGTGGTGCCGCACTGGATATTGTTGTTTCCAGTGTGCGAGCTTACCTGAGTGCCCTGAACAAGATGTCCAGTTTTGTTGGGGCTATCAAGGCTAGTAGTGAAGTATCTGAAAGCCAAAGAGTTCAAACCACAGAATGA
- >LOC_Os12g04440.2 CDS ATGGCCTCCTCCCTCCTCTCCTCCCCAAAACCCTCCTCCTTCTCCTCCGCAAACCCCACCTCCACTCCACGCCCACGCGCCCAAACTCTCTCCCCCTTCCGCGCCGCCGCCCCACGCTTCTCCCATGGCCTCGCCACCGCCGCCGCCGCCGCAAACCCTAGCGCCTCCCGCCGCTGCTACCACCGCGCCTTCGCCCGCCCCGTCCGGGCGTCCATGGCGCAGCCGCGGCGCCCGGAGTACGTCCCCAACCGCATCGACGACCCCAACTACGTCCGCATCTTCGACACCACCCTCCGCGACGGGGAGCAGTCCCCCGGGGCCACCATGACCAGCGCCGAGAAGCTCGTCGTCGCGCGCCAGCTCGCCCGCCTCGGCGTCGACATCATCGAGGCCGGGTTCCCGGCCTCCTCCCCCGACGACCTCGACGCCGTGCGCTCCATCGCCATCGAGGTCGGGAACACGCCCGTCGGGGAGGACGGCCACGTGCCGGTCATCTGTGGCCTCTCGAGATGCAATAAGCGAGACATTGATGCTGCCTGGGAGGCCGTGCGGCACGCGCGGCGGCCGCGCATCCACACCTTCATTGCCACCAGCGAGATCCATATGCAGCACAAGCTAAGGAAGACGCCCGAGCAGGTGGTGGCCATTGCCAAGGAAATGGTGGCCTACGCCCGCAGCCTAGGCTGCCCTGATGTCGAGTTCAGCCCTGAAGACGCTGGCAGGTCAAACAGAGAGTTTCTATATCATATACTAGAGGAAGTCATAAAAGCTGGAGCAACAACACTCAATATCCCAGACACTGTTGGATACACTCTTCCTTATGAATTTGGGAAACTAATTGCTGATATAAAAGCAAACACTCCAGGAATTGAAAATGCCATTATTTCTACTCATTGCCAGAATGACCTTGGTCTAGCAACCGCAAATACATTAGCGGGCGCTCATGCAGGAGCACGGCAATTAGAGGTGACTATCAATGGTATTGGTGAAAGGGCTGGAAATGCTTCTTTGGAAGAGGTTGTGATGGCAATTAAATGTCGTCGAGAACTCTTAGGAGGTCTGTATACTGGAATCAATACCCAACATATCACTATGTCAAGCAAAATGGTACAAGAGCACAGTGGACTTCATGTACAACCACATAAAGCTATTGTCGGTGCCAATGCCTTTGCACATGAAAGTGGAATTCATCAGGATGGGATGCTTAAGTACAAAGGAACTTATGAAATAATTTCTCCTGATGATATTGGTCTAACACGTGCAAATGAGTTTGGTATTGTTCTTGGGAAGCTCAGTGGAAGGCATGCTGTGAGATCTAAACTAGTGGAGCTTGGATATGAAATCACTGACAAGGAATTTGAGGATTTCTTTAAACGCTACAAAGAGGTTGCAGAGAAGAAAAAGCGTGTAACTGATGAAGACATTGAGGCGCTGTTGTCTGATGAGATATTTCAGCCCAAGGTTTTTTGGTCCCTTGCTGATGTACAGGCAACTTGTGGAACACTTGGTCTGTCTACAGCAACTGTCAAACTGATAGGTCCGGATGGAGATGAGAAGATTGCATGTGCAGTTGGAACAGGTCCAGTTGATGCAGCTTACAAGGCTGTTGATGATATAATACAGATCCCAACTGTTCTTCGAGAATATAGCATGACATCGGTCACAGAAGGCATTGATGCAATTGCAACTACTAGAGTGGTTGTCACTGGAGATGTCAGCGACTCTAAACATGCTTTGACTGGTCACTCCTTCAACCGGGCATTCAGTGGGAGTGGTGCCGCACTGGATATTGTTGTTTCCAGTGTGCGAGCTTACCTGAGTGCCCTGAACAAGATGTCCAGTTTTGTTGGGGCTATCAAGGCTAGTAGTGAAGTATCTGAAAGCCAAAGAGTTCAAACCACAGAATGA
Protein Sequence
- >LOC_Os12g04440.1 protein MASSLLSSPKPSSFSSANPTSTPRPRAQTLSPFRAAAPRFSHGLATAAAAANPSASRRCYHRAFARPVRASMAQPRRPEYVPNRIDDPNYVRIFDTTLRDGEQSPGATMTSAEKLVVARQLARLGVDIIEAGFPASSPDDLDAVRSIAIEVGNTPVGEDGHVPVICGLSRCNKRDIDAAWEAVRHARRPRIHTFIATSEIHMQHKLRKTPEQVVAIAKEMVAYARSLGCPDVEFSPEDAGRSNREFLYHILEEVIKAGATTLNIPDTVGYTLPYEFGKLIADIKANTPGIENAIISTHCQNDLGLATANTLAGAHAGARQLEVTINGIGERAGNASLEEVVMAIKCRRELLGGLYTGINTQHITMSSKMVQEHSGLHVQPHKAIVGANAFAHESGIHQDGMLKYKGTYEIISPDDIGLTRANEFGIVLGKLSGRHAVRSKLVELGYEITDKEFEDFFKRYKEVAEKKKRVTDEDIEALLSDEIFQPKVFWSLADVQATCGTLGLSTATVKLIGPDGDEKIACAVGTGPVDAAYKAVDDIIQIPTVLREYSMTSVTEGIDAIATTRVVVTGDVSDSKHALTGHSFNRAFSGSGAALDIVVSSVRAYLSALNKMSSFVGAIKASSEVSESQRVQTTE*
- >LOC_Os12g04440.2 protein MASSLLSSPKPSSFSSANPTSTPRPRAQTLSPFRAAAPRFSHGLATAAAAANPSASRRCYHRAFARPVRASMAQPRRPEYVPNRIDDPNYVRIFDTTLRDGEQSPGATMTSAEKLVVARQLARLGVDIIEAGFPASSPDDLDAVRSIAIEVGNTPVGEDGHVPVICGLSRCNKRDIDAAWEAVRHARRPRIHTFIATSEIHMQHKLRKTPEQVVAIAKEMVAYARSLGCPDVEFSPEDAGRSNREFLYHILEEVIKAGATTLNIPDTVGYTLPYEFGKLIADIKANTPGIENAIISTHCQNDLGLATANTLAGAHAGARQLEVTINGIGERAGNASLEEVVMAIKCRRELLGGLYTGINTQHITMSSKMVQEHSGLHVQPHKAIVGANAFAHESGIHQDGMLKYKGTYEIISPDDIGLTRANEFGIVLGKLSGRHAVRSKLVELGYEITDKEFEDFFKRYKEVAEKKKRVTDEDIEALLSDEIFQPKVFWSLADVQATCGTLGLSTATVKLIGPDGDEKIACAVGTGPVDAAYKAVDDIIQIPTVLREYSMTSVTEGIDAIATTRVVVTGDVSDSKHALTGHSFNRAFSGSGAALDIVVSSVRAYLSALNKMSSFVGAIKASSEVSESQRVQTTE*