Gene Details:
- MSU gene ID: LOC_Os12g09540
- RAPdb gene ID: Os12g0197100
- Gene Symbol: OsPRAGL
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
Function-related keywords:
Literature:
- Identification and expression analysis of hypoxia stress inducible CCCH-type zinc finger protein genes in rice . DOI: 10.1007/s12374-012-0384-4
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os12g09540.2 cDNA AGTCAGCCGTCTGTCTCATCGATCGATTGATTCCTCGTGTCTCCGTATATTCGATCACCGCGATTCATCCTTCTTGCAGAAGAAAGAATCATGGCATGTGCTGCTTCGAGTGTAAAAGGTTCTCTCAACGTTGGAGGAGCTAAGGCATTCAGCAATAATTTGTTTCGTGATTACTTGAAATCTTCGGTGTCTTATCCCGTTTCAGAGATTTCTTCTCCCATCAGAGCGCAACATGTAGCATATGGTTCGAATCTCATTGTTAGGGGTTCTAAGAGCAGGGACTTTAGCTCGAAGCTCGCATCGACAAACGGCAGCTCGAAGATTTCTGAGAGGGTAACTGTATTGGTCATTGGTGGAGGAGGAAGGGAGCATGCTCTTTGTTATGCCTTGGAGCGCTCTCCATCCTGTGATGCAGTCTTCTGTGCCCCTGGTAACTCTGGCATTGCTCAATCTGGAGATGCTACATGTATACCGGACCTGGACATATCGAACAGCGACGCGGTCATCTCGTTCTGTCGCAACTGGGGAGTCGGGTTGGTTGTAGTTGGGCCTGAAGCACCCCTTGTTGCTGGCCTTGCAAATGAGCTTGTCAAAGCTGGGATACCTACTTTTGGTCCTTCATCAGAGGCTGCAGCGTTAGAAGGGTCAAAAGACTTCATGAAGAAGTTGTGTGATAAGTACCACATTCCCACCGCAAAGTACCAATCTTTCACAGATCCTTCAGATGCTAAGAAATATGTTGAGGAGCAAGGAGCCCCTATTGTTGTTAAAGCCGATGGATTGGCAGCTGGGAAAGGTGTAGTTGTTGCTATGACTTTGGAAAAGGCATTTGAAGCAATAGACTCTATGCTGGTTGAAGGTTCATTCGGTTCTGCTGGGTCACGGGTAATAGTTGAAGAATATTTAGAGGGGGAGGAGGTTTCTTTCTTTGCTCTAGTGGATGGAGAAACTGCTTTGCCTCTTGAATCAGCCCAGGACCATAAAAGAGTTGGTGATGGCGATGTTGGTCCAAATACAGGTGGTATGGGTGCATACTCCCCTGCACCAATAGTGACGGAAAAACTCAAGTGCAAAGTGATGGAGAGCATCATTGTCCCGACTGTTAAAGGTATGGCAACTGAAGGATGCAAGTTCGTCGGTGTGTTGTATGCTGGGATCATGATTGAGAAGAAATCGGGACTGCCAAAGCTTATTGAATACAATGTGCGATTTGGTGATCCAGAATGTCAGGTTCTGATGATGCGGTTACAATCCGACCTCGCACAGGTCTTGCTTGCTGCATGTAGGGGAGAACTGGGGTCAGTCTCACTAACCTGGTCGCCTGAATTGGCAACTGTGGTTGTGATGGCAAGTGAAGGTTACCCTGGTGTTTACAAGAAGGGGACAGTAATAAAAAATATCGATGAAGCTGAGCAGGTCTCTCCTGCAGTTAAGATCTTTCATGCTGGAACTGCCCTAGATCGAGATGGAAACTTCGTCGCGGCAGGAGGCCGTGTTCTTGGTGTAACCGCGAAAGGTAAGGACATTGAGGAAGCAAGGGCAAAAGCATATGACGCTCTCGACGTTGTCGACTGGCCAGAAGGATTTTTCAGGCATGACATTGGTTGGAGAGCACAGAAATATCGGCGCATGGTTGCACACTGATAGGCATGTACTGTAAATCTGTAACTATGTTATGTTTGTGATGTTAATGGGAATACAGCGACAGGGGAATGGGCATAATATTTAAGTAGTGGATGCATGGAGATGGAAGTAATTGGCAGCTTGGATTAGTTCCTTGATCGAGGAACACGTTCTTCTCATCACTAGTTTCTTTTTGGTAGTACATGTGTTTATATTTTCACCTTCTGTATTGTAATAAGAACTGGTGTGGACCAATGATGAATGCAACTTGCTTATCAATATACTCCCTCCCTTTTTT
- >LOC_Os12g09540.1 cDNA AGTCAGCCGTCTGTCTCATCGATCGATTGATTCCTCGTGTCTCCGTATATTCGATCACCGCGATTCATCCTTCTTGCAGAAGAAAGAATCATGGCATGTGCTGCTTCGAGTGTAAAAGGTTCTCTCAACGTTGGAGGAGCTAAGGCATTCAGCAATAATTTGTTTCGTGATTACTTGAAATCTTCGGTGTCTTATCCCGTTTCAGAGATTTCTTCTCCCATCAGAGCGCAACATGTAGCATATGGTTCGAATCTCATTGTTAGGGGTTCTAAGAGCAGGGACTTTAGCTCGAAGCTCGCATCGACAAACGGCAGCTCGAAGATTTCTGAGAGGGTAACTGTATTGGTCATTGGTGGAGGAGGAAGGGAGCATGCTCTTTGTTATGCCTTGGAGCGCTCTCCATCCTGTGATGCAGTCTTCTGTGCCCCTGGTAACTCTGGCATTGCTCAATCTGGAGATGCTACATGTATACCGGACCTGGACATATCGAACAGCGACGCGGTCATCTCGTTCTGTCGCAACTGGGGAGTCGGGTTGGTTGTAGTTGGGCCTGAAGCACCCCTTGTTGCTGGCCTTGCAAATGAGCTTGTCAAAGCTGGGATACCTACTTTTGGTCCTTCATCAGAGGCTGCAGCGTTAGAAGGGTCAAAAGACTTCATGAAGAAGTTGTGTGATAAGTACCACATTCCCACCGCAAAGTACCAATCTTTCACAGATCCTTCAGATGCTAAGAAATATGTTGAGGAGCAAGGAGCCCCTATTGTTGTTAAAGCCGATGGATTGGCAGCTGGGAAAGGTGTAGTTGTTGCTATGACTTTGGAAAAGGCATTTGAAGCAATAGACTCTATGCTGGTTGAAGGTTCATTCGGTTCTGCTGGGTCACGGGTAATAGTTGAAGAATATTTAGAGGGGGAGGAGGTTTCTTTCTTTGCTCTAGTGGATGGAGAAACTGCTTTGCCTCTTGAATCAGCCCAGGACCATAAAAGAGTTGGTGATGGCGATGTTGGTCCAAATACAGGTGGTATGGGTGCATACTCCCCTGCACCAATAGTGACGGAAAAACTCAAGTGCAAAGTGATGGAGAGCATCATTGTCCCGACTGTTAAAGGTATGGCAACTGAAGGATGCAAGTTCGTCGGTGTGTTGTATGCTGGGATCATGATTGAGAAGAAATCGGGACTGCCAAAGCTTATTGAATACAATGTGCGATTTGGTGATCCAGAATGTCAGGTTCTGATGATGCGGTTACAATCCGACCTCGCACAGGTCTTGCTTGCTGCATGTAGGGGAGAACTGGGGTCAGTCTCACTAACCTGGTCGCCTGAATTGGCAACTGTGGTTGTGATGGCAAGTGAAGGTTACCCTGGTGTTTACAAGAAGGGGACAGTAATAAAAAATATCGATGAAGCTGAGCAGGTCTCTCCTGCAGTTAAGATCTTTCATGCTGGAACTGCCCTAGATCGAGATGGAAACTTCGTCGCGGCAGGAGGCCGTGTTCTTGGTGTAACCGCGAAAGGTAAGGACATTGAGGAAGCAAGGGCAAAAGCATATGACGCTCTCGACGTTGTCGACTGGCCAGAAGGATTTTTCAGGCATGACATTGGTTGGAGAGCACAGAAATATCGGCGCATGGTTGCACACTGATAGGCATGTACTGTAAATCTGTAACTATGTTATGTTTGTGATGTTAATGGGAATACAGCGACAGGGGAATGGGCATAATATTTAAGTAGTGGATGCATGGAGATGGAAGTAATTGGCAGCTTGGATTAGTTCCTTGATCGAGGAACACGTTCTTCTCATCACTAGTTTCTTTTTGGTAGTACATGTGTTTATATTTTCACCTTCTGTATTGTAATAAGAACTGGTGTGGACCAATGATGAATGCAACTTGCTTATCAATATACTCCCTCCCTTTTTT
CDS Sequence
- >LOC_Os12g09540.2 CDS ATGGCATGTGCTGCTTCGAGTGTAAAAGGTTCTCTCAACGTTGGAGGAGCTAAGGCATTCAGCAATAATTTGTTTCGTGATTACTTGAAATCTTCGGTGTCTTATCCCGTTTCAGAGATTTCTTCTCCCATCAGAGCGCAACATGTAGCATATGGTTCGAATCTCATTGTTAGGGGTTCTAAGAGCAGGGACTTTAGCTCGAAGCTCGCATCGACAAACGGCAGCTCGAAGATTTCTGAGAGGGTAACTGTATTGGTCATTGGTGGAGGAGGAAGGGAGCATGCTCTTTGTTATGCCTTGGAGCGCTCTCCATCCTGTGATGCAGTCTTCTGTGCCCCTGGTAACTCTGGCATTGCTCAATCTGGAGATGCTACATGTATACCGGACCTGGACATATCGAACAGCGACGCGGTCATCTCGTTCTGTCGCAACTGGGGAGTCGGGTTGGTTGTAGTTGGGCCTGAAGCACCCCTTGTTGCTGGCCTTGCAAATGAGCTTGTCAAAGCTGGGATACCTACTTTTGGTCCTTCATCAGAGGCTGCAGCGTTAGAAGGGTCAAAAGACTTCATGAAGAAGTTGTGTGATAAGTACCACATTCCCACCGCAAAGTACCAATCTTTCACAGATCCTTCAGATGCTAAGAAATATGTTGAGGAGCAAGGAGCCCCTATTGTTGTTAAAGCCGATGGATTGGCAGCTGGGAAAGGTGTAGTTGTTGCTATGACTTTGGAAAAGGCATTTGAAGCAATAGACTCTATGCTGGTTGAAGGTTCATTCGGTTCTGCTGGGTCACGGGTAATAGTTGAAGAATATTTAGAGGGGGAGGAGGTTTCTTTCTTTGCTCTAGTGGATGGAGAAACTGCTTTGCCTCTTGAATCAGCCCAGGACCATAAAAGAGTTGGTGATGGCGATGTTGGTCCAAATACAGGTGGTATGGGTGCATACTCCCCTGCACCAATAGTGACGGAAAAACTCAAGTGCAAAGTGATGGAGAGCATCATTGTCCCGACTGTTAAAGGTATGGCAACTGAAGGATGCAAGTTCGTCGGTGTGTTGTATGCTGGGATCATGATTGAGAAGAAATCGGGACTGCCAAAGCTTATTGAATACAATGTGCGATTTGGTGATCCAGAATGTCAGGTTCTGATGATGCGGTTACAATCCGACCTCGCACAGGTCTTGCTTGCTGCATGTAGGGGAGAACTGGGGTCAGTCTCACTAACCTGGTCGCCTGAATTGGCAACTGTGGTTGTGATGGCAAGTGAAGGTTACCCTGGTGTTTACAAGAAGGGGACAGTAATAAAAAATATCGATGAAGCTGAGCAGGTCTCTCCTGCAGTTAAGATCTTTCATGCTGGAACTGCCCTAGATCGAGATGGAAACTTCGTCGCGGCAGGAGGCCGTGTTCTTGGTGTAACCGCGAAAGGTAAGGACATTGAGGAAGCAAGGGCAAAAGCATATGACGCTCTCGACGTTGTCGACTGGCCAGAAGGATTTTTCAGGCATGACATTGGTTGGAGAGCACAGAAATATCGGCGCATGGTTGCACACTGA
- >LOC_Os12g09540.1 CDS ATGGCATGTGCTGCTTCGAGTGTAAAAGGTTCTCTCAACGTTGGAGGAGCTAAGGCATTCAGCAATAATTTGTTTCGTGATTACTTGAAATCTTCGGTGTCTTATCCCGTTTCAGAGATTTCTTCTCCCATCAGAGCGCAACATGTAGCATATGGTTCGAATCTCATTGTTAGGGGTTCTAAGAGCAGGGACTTTAGCTCGAAGCTCGCATCGACAAACGGCAGCTCGAAGATTTCTGAGAGGGTAACTGTATTGGTCATTGGTGGAGGAGGAAGGGAGCATGCTCTTTGTTATGCCTTGGAGCGCTCTCCATCCTGTGATGCAGTCTTCTGTGCCCCTGGTAACTCTGGCATTGCTCAATCTGGAGATGCTACATGTATACCGGACCTGGACATATCGAACAGCGACGCGGTCATCTCGTTCTGTCGCAACTGGGGAGTCGGGTTGGTTGTAGTTGGGCCTGAAGCACCCCTTGTTGCTGGCCTTGCAAATGAGCTTGTCAAAGCTGGGATACCTACTTTTGGTCCTTCATCAGAGGCTGCAGCGTTAGAAGGGTCAAAAGACTTCATGAAGAAGTTGTGTGATAAGTACCACATTCCCACCGCAAAGTACCAATCTTTCACAGATCCTTCAGATGCTAAGAAATATGTTGAGGAGCAAGGAGCCCCTATTGTTGTTAAAGCCGATGGATTGGCAGCTGGGAAAGGTGTAGTTGTTGCTATGACTTTGGAAAAGGCATTTGAAGCAATAGACTCTATGCTGGTTGAAGGTTCATTCGGTTCTGCTGGGTCACGGGTAATAGTTGAAGAATATTTAGAGGGGGAGGAGGTTTCTTTCTTTGCTCTAGTGGATGGAGAAACTGCTTTGCCTCTTGAATCAGCCCAGGACCATAAAAGAGTTGGTGATGGCGATGTTGGTCCAAATACAGGTGGTATGGGTGCATACTCCCCTGCACCAATAGTGACGGAAAAACTCAAGTGCAAAGTGATGGAGAGCATCATTGTCCCGACTGTTAAAGGTATGGCAACTGAAGGATGCAAGTTCGTCGGTGTGTTGTATGCTGGGATCATGATTGAGAAGAAATCGGGACTGCCAAAGCTTATTGAATACAATGTGCGATTTGGTGATCCAGAATGTCAGGTTCTGATGATGCGGTTACAATCCGACCTCGCACAGGTCTTGCTTGCTGCATGTAGGGGAGAACTGGGGTCAGTCTCACTAACCTGGTCGCCTGAATTGGCAACTGTGGTTGTGATGGCAAGTGAAGGTTACCCTGGTGTTTACAAGAAGGGGACAGTAATAAAAAATATCGATGAAGCTGAGCAGGTCTCTCCTGCAGTTAAGATCTTTCATGCTGGAACTGCCCTAGATCGAGATGGAAACTTCGTCGCGGCAGGAGGCCGTGTTCTTGGTGTAACCGCGAAAGGTAAGGACATTGAGGAAGCAAGGGCAAAAGCATATGACGCTCTCGACGTTGTCGACTGGCCAGAAGGATTTTTCAGGCATGACATTGGTTGGAGAGCACAGAAATATCGGCGCATGGTTGCACACTGA
Protein Sequence
- >LOC_Os12g09540.2 protein MACAASSVKGSLNVGGAKAFSNNLFRDYLKSSVSYPVSEISSPIRAQHVAYGSNLIVRGSKSRDFSSKLASTNGSSKISERVTVLVIGGGGREHALCYALERSPSCDAVFCAPGNSGIAQSGDATCIPDLDISNSDAVISFCRNWGVGLVVVGPEAPLVAGLANELVKAGIPTFGPSSEAAALEGSKDFMKKLCDKYHIPTAKYQSFTDPSDAKKYVEEQGAPIVVKADGLAAGKGVVVAMTLEKAFEAIDSMLVEGSFGSAGSRVIVEEYLEGEEVSFFALVDGETALPLESAQDHKRVGDGDVGPNTGGMGAYSPAPIVTEKLKCKVMESIIVPTVKGMATEGCKFVGVLYAGIMIEKKSGLPKLIEYNVRFGDPECQVLMMRLQSDLAQVLLAACRGELGSVSLTWSPELATVVVMASEGYPGVYKKGTVIKNIDEAEQVSPAVKIFHAGTALDRDGNFVAAGGRVLGVTAKGKDIEEARAKAYDALDVVDWPEGFFRHDIGWRAQKYRRMVAH*
- >LOC_Os12g09540.1 protein MACAASSVKGSLNVGGAKAFSNNLFRDYLKSSVSYPVSEISSPIRAQHVAYGSNLIVRGSKSRDFSSKLASTNGSSKISERVTVLVIGGGGREHALCYALERSPSCDAVFCAPGNSGIAQSGDATCIPDLDISNSDAVISFCRNWGVGLVVVGPEAPLVAGLANELVKAGIPTFGPSSEAAALEGSKDFMKKLCDKYHIPTAKYQSFTDPSDAKKYVEEQGAPIVVKADGLAAGKGVVVAMTLEKAFEAIDSMLVEGSFGSAGSRVIVEEYLEGEEVSFFALVDGETALPLESAQDHKRVGDGDVGPNTGGMGAYSPAPIVTEKLKCKVMESIIVPTVKGMATEGCKFVGVLYAGIMIEKKSGLPKLIEYNVRFGDPECQVLMMRLQSDLAQVLLAACRGELGSVSLTWSPELATVVVMASEGYPGVYKKGTVIKNIDEAEQVSPAVKIFHAGTALDRDGNFVAAGGRVLGVTAKGKDIEEARAKAYDALDVVDWPEGFFRHDIGWRAQKYRRMVAH*