Gene Details:
- MSU gene ID: LOC_Os12g42310
- RAPdb gene ID: Os12g0617900
- Gene Symbol: OsPPKL3
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Transgenic studies showed that OsPPKL1 and OsPPKL3 function as negative regulators of grain length, whereas OsPPKL2 as a positive regulator.
Function-related keywords:
Literature:
- Rare allele of OsPPKL1 associated with grain length causes extra-large grain and a significant yield increase in rice . DOI: 10.1073/pnas.1219776110 ; PMID: 23236132
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os12g42310.1 cDNA TTTCCACTCTCGCCACCACCACTCCGCGACAAGCTCGTGCTCCCCCCCAAATCCCAAATCTCCCAGGGGCCTCCTCGATCGATCCCATCCCCCCCCTCACTTCGCCGGCGGCGGCTGCGGCGGCGTAAGCGGCGACGACCGGTGGTGTGGCGTGTTCTACCTAGGGTTTCGGTGGGGGGAGGAGGGATGGCAGCGGCCTCGCCGCAAGTGGCAAGGAGTTGGGAGGAGTAGGCGGAGCTAAGAGATTTTTTTGCTCTCTCGCTTCTTCTCTGTGTGTGTGTTGCGTGGTGGGGAGGAAGATCTCGAGCGGTTGGAAACCCTAGTGGGGAGGGAGGGAGTGGGCGGGGGGGATGGACGTGGACTCGAGGATGACGACGGAGTCGGACTCCGACTCGGACGCCGCGGCGCAGGGGGGAGGAGGAGGAGGGTTCGGGAGCGAGACCTCCTCGGCGTCGCCCTCGGCGCCCGGGACGCCGACGGCTATGGGGGCAGGAGGGGGAGCTGCTCCTATCGCTGCTGCTGCTATCGCTGCCGCCGCGTCGGCGGCGGTGGTGGCGGGCCCGAGGCCCGCGCCGGGGTACACGGTGGTGAACGCGGCGATGGAGAAGAAGGAGGACGGGCCCGGGTGCCGGTGCGGCCACACGCTCACCGCGGTGCCGGCCGTCGGGGAGGAGGGCGCGCCGGGGTACGTGGGGCCGCGGCTGATCCTCTTCGGCGGTGCCACCGCGCTCGAGGGGAACTCCGCCACGCCGCCATCCTCGGCCGGGAGCGCCGGAATCCGTCTTGCTGGTGCTACTGCGGATGTGCACTGCTACGATGTTTCATCGAATAAGTGGAGCAGGCTTACTCCAGTTGGTGAACCTCCTTCACCAAGAGCGGCACATGTAGCGACTGCTGTTGGCACCATGGTGGTCATTCAGGGTGGGATAGGTCCTGCTGGTTTATCTGCAGAAGACCTTCATGTTCTGGATCTTACACAACAACGACCGCGATGGCACAGAGTGGTGGTTCAAGGGCCTGGCCCTGGTCCTCGATATGGACATGTGATGGCTTTGGTTGGGCAGCGTTTCTTGTTGACAATCGGTGGAAATGATGGGAAGAGGCCCCTGGCTGATGTGTGGGCCCTTGATACAGCAGCTAAGCCATATGAGTGGAGGAAACTTGAACCAGAAGGTGAAGGACCACCCCCATGCATGTATGCAACTGCAAGTGCCCGTTCTGATGGACTTCTATTACTCTGTGGTGGGAGGGATGCTAATAGTGTGCCCCTAGCAAGTGCATATGGCCTTGCAAAACACAGGGATGGACGCTGGGAGTGGGCAATCGCCCCTGGTGTCTCTCCATCACCCAGATATCAACATGCAGCTGTTTTCGTCAATGCACGACTTCATGTCTCAGGAGGGGCCCTTGGAGGCGGTCGCATGGTTGAAGACTCCTCAAGTGTTGCAGTGTTGGATACTGCTGCTGGAGTGTGGTGTGATACAAAATCAGTAGTTACTACTCCAAGGACAGGAAGATATAGTGCAGATGCTGCAGGCGGTGATGCTTCTGTAGAGCTTACACGACGGTGCAGGCATGCAGCTGCTGCAGTTGGTGATATGATATATGTTTATGGAGGTCTACGGGGAGGTGTGCTGCTAGATGACCTTCTTGTTGCCGAAGATCTTGCTGCTGCTGAAACAACAAATGCAGCAAATCAGGCAGCTGCAATTGCTGCAGCCTCTGACATACAAGCTGGAAGAGAACCTGGTAGGTATGCCTACAATGATGAACAAACAGGGCAGCCAGCTACAATAACATCTCCTGATGGAGCTGTGGTTCTTGGAACTCCAGTTGCTGCTCCCGTTAATGGGGACATGTATACTGATATTAGCCCTGAGAACGCTGTGATCCAGGGACAAAGGAGAATGAGCAAAGGTGTTGATTATTTGGTTGAAGCATCTGCTGCAGAGGCTGAGGCAATCAGTGCTACTTTAGCTGCTGTAAAAGCTCGGCAAGTTAATGGTGAGGCAGAGCATTCACCTGACAGGGAGCAGTCTCCAGATGCCACACCAAGTGTGAAGCAAAATGCAAGCCTGATAAAACCAGACTATGCTCTTTCAAATAATTCAACACCACCTCCTGGGGTTCGGTTACACCATAGAGCAGTTGTGGTAGCAGCAGAAACCGGAGGTGCCTTAGGTGGCATGGTTAGGCAGCTCTCAATTGACCAGTTTGAAAATGAAGGAAGAAGGGTCATCTATGGCACTCCTGAGAGTGCAACTGCAGCAAGGAAGTTGCTAGATCGGCAAATGTCTATTAATAGTGTACCTAAAAAGGTAATTGCATCCCTCTTGAAACCTCGTGGTTGGAAGCCCCCTGTGCGAAGGCAGTTCTTTTTGGACTGCAATGAGATTGCAGACCTATGTGATAGTGCGGAAAGAATATTTTCAAGTGAACCAAGTGTCCTACAGCTTAAAGCTCCAATTAAGATATTTGGTGATTTGCACGGTCAATTTGGTGACCTAATGCGCTTGTTTGATGAGTACGGTGCTCCTTCGACAGCTGGAGACATTGCTTACATTGATTACCTCTTCTTGGGAGATTACGTGGATCGTGGTCAGCATAGTTTGGAGACAATCACTCTTCTCCTTGCACTTAAGGTTGAATATCCTCTTAATGTACATTTGATTCGAGGGAATCATGAGGCCGCTGATATCAATGCTTTGTTTGGGTTCCGAATAGAGTGCATAGAGCGAATGGGTGAGCGTGATGGGATCTGGACCTGGCATCGCATGAATAGGCTATTTAATTGGCTTCCTTTGGCTGCCCTAATAGAGAAGAAAATAATATGTATGCATGGTGGTATTGGCCGGTCTATCAATCATGTTGAACAAATTGAGAATCTTCAAAGACCAATTACCATGGAAGCAGGCTCGGTTGTTCTAATGGATCTTCTGTGGTCTGATCCAACTGAAAATGATAGTGTTGAAGGACTTAGACCAAATGCCCGTGGCCCAGGCCTTGTTACCTTTGGGCCGGATCGTGTTATGGAGTTCTGCAACAACAATGACTTACAGTTAATTGTGCGAGCACATGAGTGTGTGATGGATGGTTTTGAGCGTTTTGCTCAAGGTCACCTAATCACTCTCTTCTCAGCAACAAATTACTGTGGTACGGCAAACAATGCGGGTGCAATCTTGGTTCTAGGAAGAGATCTTGTAGTAGTTCCGAAACTCATCCATCCTTTGCCGCCTGCCATTACATCTCCCGAGACCTCTCCAGAGCATCATCTTGAGGACACATGGATGCAGGAACTAAATGCCAACAGGCCGCCAACTCCAACAAGGGGCCGCCCTCAAGCAGCAAACAATGACCGAGGCTCTCTTGCATGGATATAGTAGCTTTGGCATGCGCTGAATTTATTCATTCCAAGTCCTCATCATTGGGTTCTGGCTAAGCTACATTTATCCGTTCTGCACAGAGGCAGACGATCTGTGCTCAAGAGACGTGCTAGCCCACAACAATTGCCAACTTGGAGGTCGTTTGCAGAGGAGAGCTAAGCTACAGAAAGAACCAAGGGTGGAGAAACTTCGCCAATCACCACCGACAGCGCTCTCCAATTTCTTTTCCCAAATCATGAGAAGTAAATGAACATATTCTTGGTCGTTCATCGGAAGATCCTACCTGCGAGGCTTCGCCCCTGTATATACTCAGATGATGCCCCAGCGGATAGGTGAGTGGGGTGTATGTGTTTTGGTCAACCGATTTGAGGAACAGAAGGGATAGTGTAACTAGTGGTTATTGTACTAGGTATTCTTTTCCTGTGTCTAGATTTTGTTTTTACCATGTTGGAAAAGTATTGGAGTGGCCAAAGGAGTAAACTTATTGGATGGGGTCCATCTAGTTGTTGTATAATAGCTGTCTCACCTATTTGTGTTATCACGCCTTCCTCCCATTTGTAATACTACCTGTCTCTGGTGCTGACATGATGTACAATATTATCCTTGTCGTCAAAATTTTGTGTAGTGAACAAAGTTGGTGATTGTTTGATTTGTTAGGGGTGGTAAGAGCAGCCTTGTATTGTACTGTCCAATTTTTGATCTTCATCTTTGTGCCACACTCCTATGATCTTGGGTTTGATCTTTTTCAGCTTTGGATATGAGCCAGGCTAAATTTGAATTTTATAACTTAATTTAG
CDS Sequence
- >LOC_Os12g42310.1 CDS ATGGACGTGGACTCGAGGATGACGACGGAGTCGGACTCCGACTCGGACGCCGCGGCGCAGGGGGGAGGAGGAGGAGGGTTCGGGAGCGAGACCTCCTCGGCGTCGCCCTCGGCGCCCGGGACGCCGACGGCTATGGGGGCAGGAGGGGGAGCTGCTCCTATCGCTGCTGCTGCTATCGCTGCCGCCGCGTCGGCGGCGGTGGTGGCGGGCCCGAGGCCCGCGCCGGGGTACACGGTGGTGAACGCGGCGATGGAGAAGAAGGAGGACGGGCCCGGGTGCCGGTGCGGCCACACGCTCACCGCGGTGCCGGCCGTCGGGGAGGAGGGCGCGCCGGGGTACGTGGGGCCGCGGCTGATCCTCTTCGGCGGTGCCACCGCGCTCGAGGGGAACTCCGCCACGCCGCCATCCTCGGCCGGGAGCGCCGGAATCCGTCTTGCTGGTGCTACTGCGGATGTGCACTGCTACGATGTTTCATCGAATAAGTGGAGCAGGCTTACTCCAGTTGGTGAACCTCCTTCACCAAGAGCGGCACATGTAGCGACTGCTGTTGGCACCATGGTGGTCATTCAGGGTGGGATAGGTCCTGCTGGTTTATCTGCAGAAGACCTTCATGTTCTGGATCTTACACAACAACGACCGCGATGGCACAGAGTGGTGGTTCAAGGGCCTGGCCCTGGTCCTCGATATGGACATGTGATGGCTTTGGTTGGGCAGCGTTTCTTGTTGACAATCGGTGGAAATGATGGGAAGAGGCCCCTGGCTGATGTGTGGGCCCTTGATACAGCAGCTAAGCCATATGAGTGGAGGAAACTTGAACCAGAAGGTGAAGGACCACCCCCATGCATGTATGCAACTGCAAGTGCCCGTTCTGATGGACTTCTATTACTCTGTGGTGGGAGGGATGCTAATAGTGTGCCCCTAGCAAGTGCATATGGCCTTGCAAAACACAGGGATGGACGCTGGGAGTGGGCAATCGCCCCTGGTGTCTCTCCATCACCCAGATATCAACATGCAGCTGTTTTCGTCAATGCACGACTTCATGTCTCAGGAGGGGCCCTTGGAGGCGGTCGCATGGTTGAAGACTCCTCAAGTGTTGCAGTGTTGGATACTGCTGCTGGAGTGTGGTGTGATACAAAATCAGTAGTTACTACTCCAAGGACAGGAAGATATAGTGCAGATGCTGCAGGCGGTGATGCTTCTGTAGAGCTTACACGACGGTGCAGGCATGCAGCTGCTGCAGTTGGTGATATGATATATGTTTATGGAGGTCTACGGGGAGGTGTGCTGCTAGATGACCTTCTTGTTGCCGAAGATCTTGCTGCTGCTGAAACAACAAATGCAGCAAATCAGGCAGCTGCAATTGCTGCAGCCTCTGACATACAAGCTGGAAGAGAACCTGGTAGGTATGCCTACAATGATGAACAAACAGGGCAGCCAGCTACAATAACATCTCCTGATGGAGCTGTGGTTCTTGGAACTCCAGTTGCTGCTCCCGTTAATGGGGACATGTATACTGATATTAGCCCTGAGAACGCTGTGATCCAGGGACAAAGGAGAATGAGCAAAGGTGTTGATTATTTGGTTGAAGCATCTGCTGCAGAGGCTGAGGCAATCAGTGCTACTTTAGCTGCTGTAAAAGCTCGGCAAGTTAATGGTGAGGCAGAGCATTCACCTGACAGGGAGCAGTCTCCAGATGCCACACCAAGTGTGAAGCAAAATGCAAGCCTGATAAAACCAGACTATGCTCTTTCAAATAATTCAACACCACCTCCTGGGGTTCGGTTACACCATAGAGCAGTTGTGGTAGCAGCAGAAACCGGAGGTGCCTTAGGTGGCATGGTTAGGCAGCTCTCAATTGACCAGTTTGAAAATGAAGGAAGAAGGGTCATCTATGGCACTCCTGAGAGTGCAACTGCAGCAAGGAAGTTGCTAGATCGGCAAATGTCTATTAATAGTGTACCTAAAAAGGTAATTGCATCCCTCTTGAAACCTCGTGGTTGGAAGCCCCCTGTGCGAAGGCAGTTCTTTTTGGACTGCAATGAGATTGCAGACCTATGTGATAGTGCGGAAAGAATATTTTCAAGTGAACCAAGTGTCCTACAGCTTAAAGCTCCAATTAAGATATTTGGTGATTTGCACGGTCAATTTGGTGACCTAATGCGCTTGTTTGATGAGTACGGTGCTCCTTCGACAGCTGGAGACATTGCTTACATTGATTACCTCTTCTTGGGAGATTACGTGGATCGTGGTCAGCATAGTTTGGAGACAATCACTCTTCTCCTTGCACTTAAGGTTGAATATCCTCTTAATGTACATTTGATTCGAGGGAATCATGAGGCCGCTGATATCAATGCTTTGTTTGGGTTCCGAATAGAGTGCATAGAGCGAATGGGTGAGCGTGATGGGATCTGGACCTGGCATCGCATGAATAGGCTATTTAATTGGCTTCCTTTGGCTGCCCTAATAGAGAAGAAAATAATATGTATGCATGGTGGTATTGGCCGGTCTATCAATCATGTTGAACAAATTGAGAATCTTCAAAGACCAATTACCATGGAAGCAGGCTCGGTTGTTCTAATGGATCTTCTGTGGTCTGATCCAACTGAAAATGATAGTGTTGAAGGACTTAGACCAAATGCCCGTGGCCCAGGCCTTGTTACCTTTGGGCCGGATCGTGTTATGGAGTTCTGCAACAACAATGACTTACAGTTAATTGTGCGAGCACATGAGTGTGTGATGGATGGTTTTGAGCGTTTTGCTCAAGGTCACCTAATCACTCTCTTCTCAGCAACAAATTACTGTGGTACGGCAAACAATGCGGGTGCAATCTTGGTTCTAGGAAGAGATCTTGTAGTAGTTCCGAAACTCATCCATCCTTTGCCGCCTGCCATTACATCTCCCGAGACCTCTCCAGAGCATCATCTTGAGGACACATGGATGCAGGAACTAAATGCCAACAGGCCGCCAACTCCAACAAGGGGCCGCCCTCAAGCAGCAAACAATGACCGAGGCTCTCTTGCATGGATATAG
Protein Sequence
- >LOC_Os12g42310.1 protein MDVDSRMTTESDSDSDAAAQGGGGGGFGSETSSASPSAPGTPTAMGAGGGAAPIAAAAIAAAASAAVVAGPRPAPGYTVVNAAMEKKEDGPGCRCGHTLTAVPAVGEEGAPGYVGPRLILFGGATALEGNSATPPSSAGSAGIRLAGATADVHCYDVSSNKWSRLTPVGEPPSPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRFLLTIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTTPRTGRYSADAAGGDASVELTRRCRHAAAAVGDMIYVYGGLRGGVLLDDLLVAEDLAAAETTNAANQAAAIAAASDIQAGREPGRYAYNDEQTGQPATITSPDGAVVLGTPVAAPVNGDMYTDISPENAVIQGQRRMSKGVDYLVEASAAEAEAISATLAAVKARQVNGEAEHSPDREQSPDATPSVKQNASLIKPDYALSNNSTPPPGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVIYGTPESATAARKLLDRQMSINSVPKKVIASLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPLNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRMNRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSVVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAITSPETSPEHHLEDTWMQELNANRPPTPTRGRPQAANNDRGSLAWI*