Gene Details:

Functional Descriptions:

  • Here, we show that, in tomato, translocation of a phloem-mobile cyclophilin, SlCyp1, from a wild-type scion into a mutant rootstock results in restoration of vascular development and lateral root initiation.
  • We show that long-distance trafficking of SlCyp1 is associated with regulation of the shoot-to-root ratio in response to changing light intensities, by modulating root growth.
  • SlCyp1 is a key player in the signal transduction pathway that is required for maintaining a physiologically balanced shoot-to-root ratio under the prevailing environmental conditions.
  • We conclude that long-distance trafficking of SlCyp1 acts as a rheostat to control the shoot-to-root ratio, by mediating root development to integrate photosynthesis and light intensity with requirements for access to water and mineral nutrients.

Literature:

Gene Resources:

Orthologs:

Sequences:

cDNA Sequence
  • />Solyc12g088670.2.1
    AATCCCCTTCTTCCCCAACAATACAGGAAAAAAAAATAATATCGACCAATCATGGCAGCTCACAGCTCAACTCTCACCATATCCATACTTCTCATGCTCATCTTCTCCACCTTATCCTCTGCTTCCGATATGTCAATTATTAGCTACGACGAGACACATATTCACCGTCGTACCGACGATGAAGTCTCGGCGTTGTACGAGTCCTGGCTAATCGAGCACGGAAAATCGTACAACGCCTTAGGAGAAAAGGATAAGAGATTTCAGATCTTCAAGGATAACTTGAGATACATAGACGAACAGAACTCTGTTCCGAATCAGAGTTATAAGCTCGGATTGACGAAATTCGCCGATCTGACTAATGAGGAGTACAGGTCGATTTACTTGGGAACGAAGAGTTCCGGTGACCGGAAAAAGTTATCGAAGAACAAAAGTGATCGGTATCTTCCTAAAGTTGGGGATAGCTTGCCGGAATCAATTGACTGGAGAGAAAAAGGTGTGCTTGTTGGTGTCAAGGATCAAGGAAGCTGTGGGAGTTGTTGGGCATTCTCTGCTGTTGCTGCCATGGAATCAATAAACGCGATAGTCACTGGGAATTTGATATCACTATCAGAGCAAGAGTTGGTGGATTGTGATAGGTCGTACAATGAAGGTTGCGATGGTGGTCTTATGGACTACGCCTTTGAATTCGTCATTAAGAATGGAGGAATCGACACTGAAGAAGACTACCCTTACAAAGAACGCAATGGCGTATGTGATCAATATAGGAAAAATGCCAAGGTTGTTAAAATAGATAGCTATGAAGATGTTCCTGTTAATAACGAAAAGGCGTTGCAAAAGGCTGTTGCACATCAACCTGTGAGCATTGCACTTGAAGCTGGTGGCAGAGACTTCCAGCACTACAAATCTGGTATCTTCACTGGAAAATGTGGTACTGCAGTGGATCATGGTGTAGTTATTGCTGGATATGGTACTGAGAATGGCATGGATTATTGGATCGTTAGGAACTCATGGGGAGCTAACTGGGGAGAGAACGGCTACCTCAGAGTCCAGCGTAACGTTGCCAGCTCTAGTGGCTTGTGTGGTTTAGCCATAGAGCCTTCATATCCAGTAAAAACAGGACCAAATCCTCCTAAACCCGCTCCATCTCCTCCATCTCCGGTCAAGCCACCTACAGAGTGTGATGAATATTCTCAATGCGCTGTCGGCACCACTTGCTGCTGTATCCTTCAGTTCCGTAGGTCTTGCTTCTCTTGGGGATGCTGCCCACTTGAAGGAGCCACTTGCTGTGAAGACCACTACAGTTGCTGCCCACACGACTATCCTATCTGCAATGTTCGTCAAGGAACATGCTCAATGAGCAAGGGCAACCCACTGGGAGTGAAGGCAATGAAGCGCATTCTTGCACAACCTATTGGGGCCTTCGGAAATGGAGGAAAGAAGAGCAGTTCTTGAATTCTACAAGCACCAATACTGCGGAATGGGGTGAAAAAGCAGGGACAACAGAGGACGTGAATCGATACATTGATTAACAAAACCTCATTTTTCCAGCAGAAAGGTGTAGAAACAGATGAATGCATTATCAAGATTACAAGATGTTGATTAATGATTTGTATATATTGGATTATTGTTCAACTTTGTCTAATTATTCAGTACATATTCCTTGTTTCTTATTATGAAGACTCCAAGTAATGCTTTTTAGTCTTCCATCTGTACTTGGTTTCAACATTAATTAAAAAAAAGGACTATCTTCTGTACCTTTCATTTA
CDS Sequence
  • />Solyc12g088670.2.1
    ATGGCAGCTCACAGCTCAACTCTCACCATATCCATACTTCTCATGCTCATCTTCTCCACCTTATCCTCTGCTTCCGATATGTCAATTATTAGCTACGACGAGACACATATTCACCGTCGTACCGACGATGAAGTCTCGGCGTTGTACGAGTCCTGGCTAATCGAGCACGGAAAATCGTACAACGCCTTAGGAGAAAAGGATAAGAGATTTCAGATCTTCAAGGATAACTTGAGATACATAGACGAACAGAACTCTGTTCCGAATCAGAGTTATAAGCTCGGATTGACGAAATTCGCCGATCTGACTAATGAGGAGTACAGGTCGATTTACTTGGGAACGAAGAGTTCCGGTGACCGGAAAAAGTTATCGAAGAACAAAAGTGATCGGTATCTTCCTAAAGTTGGGGATAGCTTGCCGGAATCAATTGACTGGAGAGAAAAAGGTGTGCTTGTTGGTGTCAAGGATCAAGGAAGCTGTGGGAGTTGTTGGGCATTCTCTGCTGTTGCTGCCATGGAATCAATAAACGCGATAGTCACTGGGAATTTGATATCACTATCAGAGCAAGAGTTGGTGGATTGTGATAGGTCGTACAATGAAGGTTGCGATGGTGGTCTTATGGACTACGCCTTTGAATTCGTCATTAAGAATGGAGGAATCGACACTGAAGAAGACTACCCTTACAAAGAACGCAATGGCGTATGTGATCAATATAGGAAAAATGCCAAGGTTGTTAAAATAGATAGCTATGAAGATGTTCCTGTTAATAACGAAAAGGCGTTGCAAAAGGCTGTTGCACATCAACCTGTGAGCATTGCACTTGAAGCTGGTGGCAGAGACTTCCAGCACTACAAATCTGGTATCTTCACTGGAAAATGTGGTACTGCAGTGGATCATGGTGTAGTTATTGCTGGATATGGTACTGAGAATGGCATGGATTATTGGATCGTTAGGAACTCATGGGGAGCTAACTGGGGAGAGAACGGCTACCTCAGAGTCCAGCGTAACGTTGCCAGCTCTAGTGGCTTGTGTGGTTTAGCCATAGAGCCTTCATATCCAGTAAAAACAGGACCAAATCCTCCTAAACCCGCTCCATCTCCTCCATCTCCGGTCAAGCCACCTACAGAGTGTGATGAATATTCTCAATGCGCTGTCGGCACCACTTGCTGCTGTATCCTTCAGTTCCGTAGGTCTTGCTTCTCTTGGGGATGCTGCCCACTTGAAGGAGCCACTTGCTGTGAAGACCACTACAGTTGCTGCCCACACGACTATCCTATCTGCAATGTTCGTCAAGGAACATGCTCAATGAGCAAGGGCAACCCACTGGGAGTGAAGGCAATGAAGCGCATTCTTGCACAACCTATTGGGGCCTTCGGAAATGGAGGAAAGAAGAGCAGTTCTTGA
Protein Sequence
  • />Solyc12g088670.2.1
    MAAHSSTLTISILLMLIFSTLSSASDMSIISYDETHIHRRTDDEVSALYESWLIEHGKSYNALGEKDKRFQIFKDNLRYIDEQNSVPNQSYKLGLTKFADLTNEEYRSIYLGTKSSGDRKKLSKNKSDRYLPKVGDSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDRSYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGKCGTAVDHGVVIAGYGTENGMDYWIVRNSWGANWGENGYLRVQRNVASSSGLCGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQCAVGTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGGKKSSS*