Gene Details:

Functional Descriptions:

  • The MADS-box protein SlTAGL1 regulates a ripening-associated SlDQD/SDH2 involved in flavonoid biosynthesis and resistance against Botrytis cinerea in post-harvest tomato fruit.
  • A ripening-associated SlDQD/SDH member, SlDQD/SDH2, that plays a key role in shikimate and flavonoid metabolism. Overexpression of this gene resulted in an increased content of shikimate and flavonoids, while knockout of this gene by CRISPR/Cas9 mediated gene editing led to a significantly lower content of shikimate and flavonoids by downregulation of flavonoid biosynthesis-related genes.
  • The function of SlDQD/SDH family genes in tomato (Solanum lycopersicum) fruit metabolites is still unknown. In the present study, we identified a ripening-associated SlDQD/SDH member, SlDQD/SDH2, that plays a key role in shikimate and flavonoid metabolism.
  • Dual-luciferase reporter and EMSA assays indicated that SlDQD/SDH2 is a direct target of the key ripening regulator SlTAGL1.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • />Solyc10g038080.3.1
    ATATTTGAAGGAAGGAAAAATAATTTTTATGAGAATTCAAATGTAGTTAAAAAAATAAATGTATAGTCAGCGATGAGGCAGCAAGCCACCTACTATTTCTACGGAATTGGCGCAGTATGCAAAAATCAAATGATTCAATTTTTGTTATCTTAATTAGTTTTCAAAGTTGTTGGGTTCCATTCCAAACAAGATTCTCCAACCCCCATTCCATTACTTAAATCTATTACCTATCTTTCACTAACCTACTCAACAACAAATAAATTTCCCAAATTCAACATTTTTTTTCACTATAAATCCCTAAAAGTGGATTATGTTTTAATTCCTAAAAGGGGAAATAATGGGTAGTGTTGGATTGTTGAAGAATTCCGCCATGGTTTGTGCTCCATTAATGGCGACATCAGTGGATCAATTAATTGATGAAATGGTTGAGGCTAAATCACAAGGTGCAGATTGTGTTGAGATTAGGCTTGATGCTATCCACAATTTCCAACCTCACAAACATCTTCAACTTCTCTTCAAAAATAAGCCACTCCCTATTCTCATTCTTTACAGGCCAATATGGGAAAGAAATGACTTTGAAGCTGATGCCCACAAACAATTGGAAGCCCTTCGGTTGGCTAAAGAATTGGGAGCTGATTATGTTGAGTTGGACCTCAAGATAGCTAGTGAGTTTGCAAAAAATGAAAAGTCGAGTTGGAGTAGTGGTTGTAAACTAATTACATCATGCTTCGTGGACAATGTGACCTCAAAAGAAGACCTCAGCCAAGTTGTTGCATCCATGCAATCTACTGGGGCAGATATCCTCAAATTGTTATAAATGCAAATGACATTACAGAACTAGAGAAAACGTTTCACTTGCTTTCACATTGCCAGGTGCCGCTTATCGCCTACTCTGTTGGGGAAGAGGTCTCATAAGTCAGCTGTTGGGCCCAAATTCGGTAGTGTCCTATTATATGGATCTCTTGATGGTAATGCAGTGCCTGGTCTTCCTTCTCTTGCCAGCCTTAGACAAGCCTACGGAGTTGATTTGATGGATAATGATACTAAAGTTTTTGGGCTCATTTCTAAACCAGTGGGTCATAGTAAAGGACCTATTTTGCATAATCCAACGTTTAGACATGTGGGTTATAATGGAATTTATGTTCCAATGTTTGTGGATGATCTTAAGGAGTTCTTTAGGGTCTACTCAAGTCCCGACTTTGCTGGTTTCAGTGTTGGAATTCCATACAAGGAAGCAGTGGTGAGCTTTTGTGATGAAGTCGATCCATTGGCTGAGTCCATAGGGGCTGTAAATACCATCATACGGAGGCCTTGCGATGGGAAGTTAATTGGTTACAACACAGATTGTGAGGCTTCTATAACAGCCATCGAGGATGCTTTGAAAGCAAATGGAGAAGCTTTAGTTCCTTGTTCACTCGCTAGGAAAATGTTTGTGTTGGTGGGTGCTGGAGGTGCAGGAAGAGCTCTTGCATTCGGAGCCAAGAGCAGGGGAGCTCGAATTGTGATTTTTGACATTGATTTTGATAGAGCAAAAGCTCTTGCTGCCGCAGTTAGTGGTGAAGCTCTGCCATTTGAAAAATTAGCTTCTTTTCAGCCAGAGAAAGGTGCAATCCTTGCGAATGCAACACCTATAGGAATGCATCCAAATAAAGATAGGATACCTGTGCCTGAGGGAAGCTTAAAGGATTATGTAGTGGTGTTTGATGCTGTATATACACCACGAAGGACTACTCTACTGGAAGATGCGGAGGCTGCTGGAGCACTCATTGTAAGTGGAGTTGAAATGTTTCTTAGACAGGCTATAGGACAGTTCAACCTTTTCACAGGAAGTAAAGCACCAGAAGAATTCATGCGTGACATCGTTATGTCAAAATTCTAATCATCAACAATTTCAATTAAATTTGTGAAACGCCAACAAGGCTGGCAAAAATTGCATATTTTTTATTCATGACACAAAATCTTGTTAGTATTTTCTTGGATAGCAAAAACTATTGTTGTAATTCAACAATTTGTGCAAATTTGATTCATTTTAAACAAACCATCTTAATTTTTATTTCT
CDS Sequence
  • />Solyc10g038080.3.1
    ATGGATAATGATACTAAAGTTTTTGGGCTCATTTCTAAACCAGTGGGTCATAGTAAAGGACCTATTTTGCATAATCCAACGTTTAGACATGTGGGTTATAATGGAATTTATGTTCCAATGTTTGTGGATGATCTTAAGGAGTTCTTTAGGGTCTACTCAAGTCCCGACTTTGCTGGTTTCAGTGTTGGAATTCCATACAAGGAAGCAGTGGTGAGCTTTTGTGATGAAGTCGATCCATTGGCTGAGTCCATAGGGGCTGTAAATACCATCATACGGAGGCCTTGCGATGGGAAGTTAATTGGTTACAACACAGATTGTGAGGCTTCTATAACAGCCATCGAGGATGCTTTGAAAGCAAATGGAGAAGCTTTAGTTCCTTGTTCACTCGCTAGGAAAATGTTTGTGTTGGTGGGTGCTGGAGGTGCAGGAAGAGCTCTTGCATTCGGAGCCAAGAGCAGGGGAGCTCGAATTGTGATTTTTGACATTGATTTTGATAGAGCAAAAGCTCTTGCTGCCGCAGTTAGTGGTGAAGCTCTGCCATTTGAAAAATTAGCTTCTTTTCAGCCAGAGAAAGGTGCAATCCTTGCGAATGCAACACCTATAGGAATGCATCCAAATAAAGATAGGATACCTGTGCCTGAGGGAAGCTTAAAGGATTATGTAGTGGTGTTTGATGCTGTATATACACCACGAAGGACTACTCTACTGGAAGATGCGGAGGCTGCTGGAGCACTCATTGTAAGTGGAGTTGAAATGTTTCTTAGACAGGCTATAGGACAGTTCAACCTTTTCACAGGAAGTAAAGCACCAGAAGAATTCATGCGTGACATCGTTATGTCAAAATTCTAA
Protein Sequence
  • />Solyc10g038080.3.1
    MDNDTKVFGLISKPVGHSKGPILHNPTFRHVGYNGIYVPMFVDDLKEFFRVYSSPDFAGFSVGIPYKEAVVSFCDEVDPLAESIGAVNTIIRRPCDGKLIGYNTDCEASITAIEDALKANGEALVPCSLARKMFVLVGAGGAGRALAFGAKSRGARIVIFDIDFDRAKALAAAVSGEALPFEKLASFQPEKGAILANATPIGMHPNKDRIPVPEGSLKDYVVVFDAVYTPRRTTLLEDAEAAGALIVSGVEMFLRQAIGQFNLFTGSKAPEEFMRDIVMSKF*