Gene Details:
- Gene ID: Solyc04g056390
- Gene Symbol: SlIDI1
- Gene Name: isopentenyl-diphosphate Delta-isomerase
- Genome: Tomato Genome version SL4.0
- Species: Solanum lycopersicum
Functional Descriptions:
- The expression of SlIDI1 was highest in flowers and fruit and increased with fruit ripening or flower maturation.
- In SlIDI1 mutant fruit, SlBCH1 transcription involved in β-carotenoid catabolism was obviously suppressed, which may be responsible for the higher β-carotene-to-lycopene ratio and suggested potential feedback regulatory mechanisms involved in carotenoid pathway flux.
- SlIDI1 is predicted to target chloroplasts, while SlIDI2 is likely to be localized in the cytoplasm.
Function-related keywords:
Literature:
- Alternative transcription and feedback regulation suggest that SlIDI1 is involved in tomato carotenoid synthesis in a complex way. DOI: 10.1093/hr/uhab045 ; PMID: 35031800
Related News:
Gene Resources:
- NCBI ID: 101255683
- UniProt accessions: A0A3Q7GXR4
Sequences:
cDNA Sequence
- />Solyc04g056390.3.1
GGTGTTTTGTTGAGGAAAAGAAAATCCAATATAAGGGGAGAAGCAGAAGAAAAGGAAATGAGAGGAATTGATGGGAACAAGCCGATGTCGCTGACTACTGCTTCAGCTTCTTTACAATTCTTGCGGAGGTTCATCGCCTCCCCTATAACTTCTCATTCTTCACTCCGGCTACCCAAATCTTCTCTTCTTCCTAATAATACCCTACCTGTTTCCTCTCTCCGTTGCCGTTTCCGGTGCTATTCCGCCGCCTCTACTACAACTATGGCTGATGCTATTTCTGATGCTAATATGGATGCCGTACAGCGCCGTCTCATGTTTGAAGACGAGTGTATTCTGGTGGATGAGAATGACCATGTTGTTGGTCATGACACCAAGTATAATTGTCATTTAATGGAAAAGATTGAAGCTGAAAATTTGCTGCATAGAGCTTTCAGTGTCTTTATATTCAACTCAAAATATGAATTGCTTCTTCAGCAACGATCAGCGACAAAGGTGACCTTTCCTTTGGTATGGACCAACACTTGCTGCAGCCATCCACTATACCGAGAGTCTGAGCTAATTGAGGAGAATTCTCTTGGGGTAAGAAATGCTGCACAAAGGAAGCTTCTCGATGAATTGGGTATTCCAGGTGAAGATGTCCCAGTTGACCAGTTCATTCCATTGGGTCGTATACTTTATAAAGCTCCATCTGACGGGAAGTGGGGAGAGCACGAACTTGATTATCTACTATTCATGGTCCGTGAAGTTAACATGAAACCTAATCCAGATGAAGTTGCTGAGGTTAAGTACGTGAACAGAGAACAACTGAAAGAGCTTTTGAGGAAAGCAGATGCAGGTGAGGAAGGTCTGAAGCTATCCCCTTGGTTCAGACTTGTCGTTGACAACTTTTTGTTCAAGTGGTGGGATCATCTTGAGAAAGGAACTCTCAAGGAAGTCATTGATATGAAAACCATCCACAAATTGACTTAAGGAGCTGCGTTGCAATCTGGTTTTACTATCATAGTTTGTTCGTTTAAACTAATAACATCAGTTGTGATAGCATCCTTCTGCATTTAGGTTTGTTGATTCTGGTAGAAGTTGGAAGGAGGTATTTTGTCAACTGATTGCAACATATATGTGGCTTTCTATCTAAACTCAATAAGATCATCACTTGTAATTTGTTGTGGTCCTTTAAATTGCTGTTGTGCTGTATAATCGGAATTTGTGTCCTTTTAGCTTTTGTGTGAATTTGCTATAGTTAAAAATGCGTCCTTTGAGCCATTTCAGATTAGGCAATAACCACAAATAAATATCTTTTATTG
CDS Sequence
- />Solyc04g056390.3.1
ATGAGAGGAATTGATGGGAACAAGCCGATGTCGCTGACTACTGCTTCAGCTTCTTTACAATTCTTGCGGAGGTTCATCGCCTCCCCTATAACTTCTCATTCTTCACTCCGGCTACCCAAATCTTCTCTTCTTCCTAATAATACCCTACCTGTTTCCTCTCTCCGTTGCCGTTTCCGGTGCTATTCCGCCGCCTCTACTACAACTATGGCTGATGCTATTTCTGATGCTAATATGGATGCCGTACAGCGCCGTCTCATGTTTGAAGACGAGTGTATTCTGGTGGATGAGAATGACCATGTTGTTGGTCATGACACCAAGTATAATTGTCATTTAATGGAAAAGATTGAAGCTGAAAATTTGCTGCATAGAGCTTTCAGTGTCTTTATATTCAACTCAAAATATGAATTGCTTCTTCAGCAACGATCAGCGACAAAGGTGACCTTTCCTTTGGTATGGACCAACACTTGCTGCAGCCATCCACTATACCGAGAGTCTGAGCTAATTGAGGAGAATTCTCTTGGGGTAAGAAATGCTGCACAAAGGAAGCTTCTCGATGAATTGGGTATTCCAGGTGAAGATGTCCCAGTTGACCAGTTCATTCCATTGGGTCGTATACTTTATAAAGCTCCATCTGACGGGAAGTGGGGAGAGCACGAACTTGATTATCTACTATTCATGGTCCGTGAAGTTAACATGAAACCTAATCCAGATGAAGTTGCTGAGGTTAAGTACGTGAACAGAGAACAACTGAAAGAGCTTTTGAGGAAAGCAGATGCAGGTGAGGAAGGTCTGAAGCTATCCCCTTGGTTCAGACTTGTCGTTGACAACTTTTTGTTCAAGTGGTGGGATCATCTTGAGAAAGGAACTCTCAAGGAAGTCATTGATATGAAAACCATCCACAAATTGACTTAA
Protein Sequence
- />Solyc04g056390.3.1
MRGIDGNKPMSLTTASASLQFLRRFIASPITSHSSLRLPKSSLLPNNTLPVSSLRCRFRCYSAASTTTMADAISDANMDAVQRRLMFEDECILVDENDHVVGHDTKYNCHLMEKIEAENLLHRAFSVFIFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEENSLGVRNAAQRKLLDELGIPGEDVPVDQFIPLGRILYKAPSDGKWGEHELDYLLFMVREVNMKPNPDEVAEVKYVNREQLKELLRKADAGEEGLKLSPWFRLVVDNFLFKWWDHLEKGTLKEVIDMKTIHKLT*