Gene Details:
- Gene ID: Solyc03g083100
- Gene Symbol: SlIQD21a
- Gene Name: IQ67 DOMAIN 21
- Genome: Tomato Genome version SL4.0
- Species: Solanum lycopersicum
Functional Descriptions:
- Microtubule-associated protein SlMAP70 interacts with IQ67-domain protein SlIQD21a to regulate fruit shape in tomato.
- SlMAP70-1–3 and SlIQD21a are highly expressed during fruit initiation, which relates to the dramatic microtubule pattern rearrangements throughout this developmental stage of tomato fruits.
- Transgenic tomato lines overexpressing SlMAP70-1 or SlIQD21a produced elongated fruits with reduced cell circularity and microtubule anisotropy, while their loss-of-function mutants showed the opposite phenotype, harboring flatter fruits. Fruits were further elongated in plants coexpressing both SlMAP70-1 and SlIQD21a
- Demonstrated that SlMAP70s and SlIQD21a physically interact and that the elongated fruit phenotype is likely due to microtubule stabilization induced by the SlMAP70–SlIQD21a interaction.
Function-related keywords:
Literature:
- Microtubule-associated protein SlMAP70 interacts with IQ67-domain protein SlIQD21a to regulate fruit shape in tomato. DOI: 10.1093/plcell/koad231 ; PMID: 37668409
Related News:
Gene Resources:
Orthologs:
Sequences:
cDNA Sequence
- />Solyc03g083100.3.1
TTTTTTTTTTTTTTTGTAGTAATAAAAGAGGAGAGTAGTAGTGTTTGTATATATAGGGGCTAAACAATAGGAAAGCTACTCTTTTTGATCTGACCCCGTGAGAATGATAAATACTAACGGCAAAATAAGCAGAAAGGTCAATTCTTTTGGCTGAAATATGGGCAAGAAAGGAAGTGGTTGGTTTTCATCTGTTAAGAAAGTTTTTAAACAGTCTCCTAAAGATTCACCTGATAAGAAGAAGGAAACATTAGACAGTAAATGGCAGCAACCTGAACCTCCTGAAGTGGTGTCACTTGAACATTTTCCAGTAGGGAGTTCTCCAGATTTTATAAGTAATGGAGGGAGTAACGTTGATTCATCGTCTACTGTGGCTGAGGATCATAACCATGCCATTGCTGTTGCAGCTGCCACGGCTGCAGCCGCTGAGGCAGCTGTTGCAGCTGCTCACGCGGCTGCTAAAGTCGTCAGATTAGCTGGTGGCTATGGCCGCGTGCAGTCAACAGAGGAAAGGGCTGCCACGCTTATTCAGTCATACTACAGGGGATATCTGGCAAGACGTGCTTTGCGTGCTCTGAAAGGATTGGTGAGGCTGCAAGCACTAGTGAGAGGACATAATGTGCGAAAACAAGCACAAATGACCATGAGATGTATGCAAGCATTGGTACGTGTACAAGGCAGAGTACGAGCAAGGAGGCTCCAGTTAGTCCAGGAAAGGCTCGAGAGCAAGCTAGAAGAGGCACGAAGACACGCTGCTGAAGAACAACAACACAAACACACCAGCCCCATTAAGAAGTCAGGGACAGAATGTTGGGATAACAGGAACCAAAGCATGGATAAGATCCAAGAAAGCAGTAGGAGAAAATTCGATGCAGAAATGAAAAGGGAAAGAGCTCTTGCTTATGCCTATGCCTATCAGCAAAAGCAACAACAACTATTGCACATTGATCCACATGGTGAGGACGCTGAATATTTTGGAAATGAGCGCGAAAAGTCACAATGGGGATGGAGTTGGCTGGAGCGATGGATGGCTTCGCAACCATACCAATACTCAAGACACATTGTGCCAAGAGACAGCTCCTATGTGACACCTTCCACAACAAGTGACATGTCTGAAAAGACAGTTGAAATGGACCTAATCACCGGGCCATTGGACTCGGAGACCATCAACTCAGCCCATCACACTTTTGATCAAGCTGAAACAAGCCCATACTCAGCCCGGAAGGTTGTTCACTCAAAATTTGATAATGTCCCTAGTTACATGACCCCAACTAAGTCTACAAAAGCGAAGGTGAGGAATCAAGGCCTTGTTAAGCATCGCAGCCCACCATCGGCTCAATGGAATGTATCGAAAAGGAAGGGGCCACACTATGGTTTGGGGCTTGAATCAAGTTCAGGGGCAAGTACAACAGCAATCTATCAAGCCTCAAGAAGCCCAAGCCCAAAAACTACCGCGAATCGCAGTAGTGGACATGCTAATAAATGGATGGCAACTTACAGCCCGGAATCAAGTGGAGATGATCGAGCTTCACCATTAGGAGCACATCCATGGAGATATAATTTTAGTTGATATATATATATATATATATATATATTTTGGTGGTTAATAAAGTACTGATCAATAATGCTGTTGCTGCGTGCTAATAGCTTATTGTTTTTGTTTTTGTATCCTATTTTGAATTTAATTTGGATGGTTAAATATATATATGAAGTTTGAGTTTTTGCAATGAATGTAATATATGATAAATGTAATCTTGTTT
CDS Sequence
- />Solyc03g083100.3.1
ATGGGCAAGAAAGGAAGTGGTTGGTTTTCATCTGTTAAGAAAGTTTTTAAACAGTCTCCTAAAGATTCACCTGATAAGAAGAAGGAAACATTAGACAGTAAATGGCAGCAACCTGAACCTCCTGAAGTGGTGTCACTTGAACATTTTCCAGTAGGGAGTTCTCCAGATTTTATAAGTAATGGAGGGAGTAACGTTGATTCATCGTCTACTGTGGCTGAGGATCATAACCATGCCATTGCTGTTGCAGCTGCCACGGCTGCAGCCGCTGAGGCAGCTGTTGCAGCTGCTCACGCGGCTGCTAAAGTCGTCAGATTAGCTGGTGGCTATGGCCGCGTGCAGTCAACAGAGGAAAGGGCTGCCACGCTTATTCAGTCATACTACAGGGGATATCTGGCAAGACGTGCTTTGCGTGCTCTGAAAGGATTGGTGAGGCTGCAAGCACTAGTGAGAGGACATAATGTGCGAAAACAAGCACAAATGACCATGAGATGTATGCAAGCATTGGTACGTGTACAAGGCAGAGTACGAGCAAGGAGGCTCCAGTTAGTCCAGGAAAGGCTCGAGAGCAAGCTAGAAGAGGCACGAAGACACGCTGCTGAAGAACAACAACACAAACACACCAGCCCCATTAAGAAGTCAGGGACAGAATGTTGGGATAACAGGAACCAAAGCATGGATAAGATCCAAGAAAGCAGTAGGAGAAAATTCGATGCAGAAATGAAAAGGGAAAGAGCTCTTGCTTATGCCTATGCCTATCAGCAAAAGCAACAACAACTATTGCACATTGATCCACATGGTGAGGACGCTGAATATTTTGGAAATGAGCGCGAAAAGTCACAATGGGGATGGAGTTGGCTGGAGCGATGGATGGCTTCGCAACCATACCAATACTCAAGACACATTGTGCCAAGAGACAGCTCCTATGTGACACCTTCCACAACAAGTGACATGTCTGAAAAGACAGTTGAAATGGACCTAATCACCGGGCCATTGGACTCGGAGACCATCAACTCAGCCCATCACACTTTTGATCAAGCTGAAACAAGCCCATACTCAGCCCGGAAGGTTGTTCACTCAAAATTTGATAATGTCCCTAGTTACATGACCCCAACTAAGTCTACAAAAGCGAAGGTGAGGAATCAAGGCCTTGTTAAGCATCGCAGCCCACCATCGGCTCAATGGAATGTATCGAAAAGGAAGGGGCCACACTATGGTTTGGGGCTTGAATCAAGTTCAGGGGCAAGTACAACAGCAATCTATCAAGCCTCAAGAAGCCCAAGCCCAAAAACTACCGCGAATCGCAGTAGTGGACATGCTAATAAATGGATGGCAACTTACAGCCCGGAATCAAGTGGAGATGATCGAGCTTCACCATTAGGAGCACATCCATGGAGATATAATTTTAGTTGATATATATATATATATATATATATATTTTGGTGGTTAATAAAGTACTGA
Protein Sequence
- />Solyc03g083100.3.1
MGKKGSGWFSSVKKVFKQSPKDSPDKKKETLDSKWQQPEPPEVVSLEHFPVGSSPDFISNGGSNVDSSSTVAEDHNHAIAVAAATAAAAEAAVAAAHAAAKVVRLAGGYGRVQSTEERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQGRVRARRLQLVQERLESKLEEARRHAAEEQQHKHTSPIKKSGTECWDNRNQSMDKIQESSRRKFDAEMKRERALAYAYAYQQKQQQLLHIDPHGEDAEYFGNEREKSQWGWSWLERWMASQPYQYSRHIVPRDSSYVTPSTTSDMSEKTVEMDLITGPLDSETINSAHHTFDQAETSPYSARKVVHSKFDNVPSYMTPTKSTKAKVRNQGLVKHRSPPSAQWNVSKRKGPHYGLGLESSSGASTTAIYQASRSPSPKTTANRSSGHANKWMATYSPESSGDDRASPLGAHPWRYNFSYIYIYIYIFWWLIKY