Gene Details:
- Gene ID: Zm00001eb233720
- Gene Symbol: BM5 Zm4CL2 Zm4CL Zm4CL1 cml1
- Gene Name: brown midrib5
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- Mutation of 4-coumarate: coenzyme A ligase 1 gene affects lignin biosynthesis and increases the cell wall digestibility in maize brown midrib5 mutants
- The comprehensive effects of BM5 mutation on lignin biosynthesis.
- BM5 encodes 4-coumarate-CoA ligase,mutants displayed lower levels of lignins and of p-coumarate esters, but increased levels of ferulate esters
Function-related keywords:
Literature:
- Mutation of 4-coumarate: coenzyme A ligase 1 gene affects lignin biosynthesis and increases the cell wall digestibility in maize brown midrib5 mutants. DOI: 10.1186/s13068-019-1421-z ; PMID: 31007716
Related News:
Gene Resources:
- NCBI ID: LOC542166
- UniProt accessions: A0A3L6EJR6 , B4FQP4
Sequences:
cDNA Sequence
- >Zm00001eb233720_T001 CACTCACCAACTCCCCAACTCCCTGTCCTCCCCTGCTCGTATATAACTCGGCACCAGCCGGTCCTCTGCCCTCCAGGAGATCAGAGCCCCGGCGAGGTCGCACCGCACCAGCCATCGTCTCCTTCCTTCCTTCCTATACTACCATCCAACCAGCTGCCCAGCGCAACGTTACCTGCCCGACATCCGACAAGCCAGTCCATCCGGCAGCGAGCAAAGGTCTGAGATGGGTTCCGTAGACGCGGCGATCGCGGTGCCGGTGCCGGCGGCGGAGGAGAAGGCGGTGGAGGAGAAGGCGGTGGTGTTCCGGTCCAAGCTCCCCGACATCGAGATCGACAGCAGCATGGCGCTGCACACCTACTGCTTCGGGAAGATGGGTGAGGTGGCGGAGCGGGCGTGCCTGGTCGACGGGCTGACGGGCGCGTCGTACACGTACGCGGAGGTGGAGTCCCTGTCCCGGCGCGCCGCGTCGGGGCTGCGCGCCATGGGGGTGGGCAAGGGCGACGTGGTGATGAGCCTGCTCCGCAACTGCCCCGAGTTCGCCTTCACCTTCCTGGGCGCCGCCCGCCTGGGCGCCGCCACCACCACGGCCAACCCGTTCTACACCCCGCACGAGGTGCGGGAGTTCGCGGCGGAGCGGGGCATCCCCGTGGTCACCGTCGACGGGCGCTTCGACGGCTGCGTGGAGTTCGCCGAGCTGATCGCGGCCGAGGAGCTGGAGGCCGACGCCGACATCCACCCCGACGACGTCGTCGCGCTGCCCTACTCCTCCGGCACCACCGGGCTGCCCAAGGGCGTCATGCTCACCCACCGCAGCCTCATCACCAGCGTCGCGCAGCAGGTTGATGGCGAGAACCCGAACCTGTACTTCCGCAAGGACGACGTGGTGCTGTGCCTGCTGCCGCTGTTCCACATCTACTCGCTGAACTCGGTGCTGCTGGCCGGCCTGCGCGCGGGCTCCACCATCGTGATCATGCGCAAGTTCGACCTGGGCGCGCTGGTGGACCTGGTGCGCAGGTACGTGATCACCATCGCGCCCTTCGTGCCGCCCATCGTGGTGGAGATCGCCAAGAGCCCCCGCGTGACCGCCGGCGACCTCGCGTCCATCCGCATGGTCATGTCCGGCGCCGCGCCCATGGGCAAGGAGCTCCAGGACGCCTTCATGGCCAAGATTCCCAATGCCGTGCTCGGGCAGGGGTACGGGATGACGGAGGCAGGCCCCGTGCTGGCGATGTGCCTGGCCTTCGCCAAGGAGCCGTACCCGGTCAAGTCCGGGTCGTGCGGCACCGTGGTGCGGAACGCGGAGCTGAAGATCGTCGACCCCGACACCGGCGCCGCCCTCGGCCGGAACCAGCCCGGCGAGATCTGCATCCGCGGGGAGCAGATCATGAAAGGTTACCTGAACGACCCCGAGTCGACGAAGAACACCATCGACAAGGACGGCTGGCTGCACACCGGAGACATCGGCTACGTGGACGACGACGACGAGATCTTCATCGTCGACAGGCTCAAGGAGATCATCAAGTACAAGGGCTTCCAGGTGCCGCCGGCGGAGCTGGAGGCGCTCCTCATCACGCACCCGGAGATCAAGGACGCCGCCGTCGTATCAATGAACGATGACCTTGCTGGTGAAATCCCGGTCGCCTTCATCGTGCGGACCGAAGGTTCTCAAGTCACCGAGGATGAGATCAAGCAATTCGTCGCCAAGGAGGTGGTTTTCTACAAGAAGATCCACAAGGTCTTCTTCACCGAATCCATCCCCAAGAACCCGTCGGGCAAGATCCTGAGGAAGGACTTGAGAGCCAGGCTCGCCGCCGGTGTTCACTGAGGCCCGTATGCAGCTTCTTCTCGGACGGCCACCACGCTGCTGCGAAAAAAAAGGCGATGTAATGGCGGTAACACTACTATTCATGAACTGGCAACAGAAGGGACACGTATTCCTGTGGAACACATGTTGCCAGAAAGAGGTTTTAGTTTGTCTGTTTGTTGGCCCTGTGTGTAATGTTCATAAACGATATAGACGTCGTCTCTATGTTGTTTTTGACCCAAAGAACAAGCCTGATTACGGCAATACAGCTACGGAGTACCGTGTTTCATATGCCTAGATGTTTGTCATAAGTTATTATAGCCGGAGATGGCGATGGGCCTCGATCTCTCCTTCACTAGGACTAGTTTGGCAACGAGGAGAGAAAAATCCCTTGAAAATTAATCTAGGAGGGGATTTTAGATGCCACCTTATTTCCCCCCTCTTCGGTGTACTTCTCTGACATTGTTTGAGAAGCAATGGGCTAAATACCTCTGTTGAGCAAAAATACATAAAAAAATCAGGAAAAATAAAAAATATATAAGAAATATTTAGAAAACTCACAAACAATAAAACATCACTAAAGATCCAAAAATATGAAGCACCTATGATTCACGCAAAGTTTAGGGTTTTGAATACCATCTAATATCAAACGAAGCTAATCCATCATCACATCACATAGTATCATCATCTCCATTCACACGTACAGGTAGACAATATAATATAAAAATGGAGTATTAGGAAGTTTGGCAGTAGAATAAGACATCTAAAATATGCACGCCACATGCCAACTTAATGCGTTTTAGTTTCATGCCAGCTTCCTTCTCCATGTC
- >Zm00001eb233720_T002 CACTCACCAACTCCCCAACTCCCTGTCCTCCCCTGCTCGTATATAACTCGGCACCAGCCGGTCCTCTGCCCTCCAGGAGATCAGAGCCCCGGCGAGGTCGCACCGCACCAGCCATCGTCTCCTTCCTTCCTTCCTATACTACCATCCAACCAGCTGCCCAGCGCAACGTTACCTGCCCGACATCCGACAAGCCAGTCCATCCGGCAGCGAGCAAAGGTCTGAGATGGGTTCCGTAGACGCGGCGATCGCGGTGCCGGTGCCGGCGGCGGAGGAGAAGGCGGTGGAGGAGAAGGCGGTGGTGTTCCGGTCCAAGCTCCCCGACATCGAGATCGACAGCAGCATGGCGCTGCACACCTACTGCTTCGGGAAGATGGGTGAGGTGGCGGAGCGGGCGTGCCTGGTCGACGGGCTGACGGGCGCGTCGTACACGTACGCGGAGGTGGAGTCCCTGTCCCGGCGCGCCGCGTCGGGGCTGCGCGCCATGGGGGTGGGCAAGGGCGACGTGGTGATGAGCCTGCTCCGCAACTGCCCCGAGTTCGCCTTCACCTTCCTGGGCGCCGCCCGCCTGGGCGCCGCCACCACCACGGCCAACCCGTTCTACACCCCGCACGAGGTGCGGGAGTTCGCGGCGGAGCGGGGCATCCCCGTGGTCACCGTCGACGGGCGCTTCGACGGCTGCGTGGAGTTCGCCGAGCTGATCGCGGCCGAGGAGCTGGAGGCCGACGCCGACATCCACCCCGACGACGTCGTCGCGCTGCCCTACTCCTCCGGCACCACCGGGCTGCCCAAGGGCGTCATGCTCACCCACCGCAGCCTCATCACCAGCGTCGCGCAGCAGGTTGATGGCGAGAACCCGAACCTGTACTTCCGCAAGGACGACGTGGTGCTGTGCCTGCTGCCGCTGTTCCACATCTACTCGCTGAACTCGGTGCTGCTGGCCGGCCTGCGCGCGGGCTCCACCATCGTGATCATGCGCAAGTTCGACCTGGGCGCGCTGGTGGACCTGGTGCGCAGGTACGTGATCACCATCGCGCCCTTCGTGCCGCCCATCGTGGTGGAGATCGCCAAGAGCCCCCGCGTGACCGCCGGCGACCTCGCGTCCATCCGCATGGTCATGTCCGGCGCCGCGCCCATGGGCAAGGAGCTCCAGGACGCCTTCATGGCCAAGATTCCCAATGCCGTGCTCGGGCAGGGGTACGGGATGACGGAGGCAGGCCCCGTGCTGGCGATGTGCCTGGCCTTCGCCAAGGAGCCGTACCCGGTCAAGTCCGGGTCGTGCGGCACCGTGGTGCGGAACGCGGAGCTGAAGATCGTCGACCCCGACACCGGCGCCGCCCTCGGCCGGAACCAGCCCGGCGAGATCTGCATCCGCGGGGAGCAGATCATGAAAGGTTACCTGAACGACCCCGAGTCGACGAAGAACACCATCGACAAGGACGGCTGGCTGCACACCGGAGACATCGGCTACGTGGACGACGACGACGAGATCTTCATCGTCGACAGGCTCAAGGAGATCATCAAGTACAAGGGCTTCCAGGTGCCGCCGGCGGAGCTGGAGGCGCTCCTCATCACGCACCCGGAGATCAAGGACGCCGCCGTCGTATCAATGAACGATGACCTTGCTGGTGAAATCCCGGTCGCCTTCATCGTGCGGACCGAAGGTTCTCAAGTCACCGAGGATGAGATCAAGCAATTCGTCGCCAAGGAGGTGGTTTTCTACAAGAAGATCCACAAGGTCTTCTTCACCGAATCCATCCCCAAGAACCCGTCGGGCAAGATCCTGAGGAAGGACTTGAGAGCCAGGCTCGCCGCCGGTGTTCACTGAGGCCCGTATGCAGCTTCTTCTCGGACGGCCACCACGCTGCTGCGAAAAAAAAGGCGATGTAATGGCGGTAACACTACTATTCATGAACTGGCAACAGAAGGGACACGTATTCCTGTGGAACACATGTTGCCAGAAAGAGGTTTTAGTTTGTCTGTTTGTTGGCCCTGTGTGTAATGTTCATAAACGATATAGACGTCGTCTCTATGTTGTTTTTGACCCAAAGAACAAGCCTGATTACGGCAATACAGCTACGGAGTACCGTGTTTCATATGCCTAGATGTTTGTCATAAGTTATTATAGCCGGAGATGGCGATGGGCCTCGATCTCTCCTTCACTAGGACTAGTTTGGCAACGAGGAGAGAAAAATCCCTTGAAAATTAATCTAGGAGGGGATTTTAGATGCCACCTTATTTCCCCCCTCTTCGGTGTACTTCTCTGACATTGTTTGAGAAGCAATGGGCTAAATACCTCTGTTGAGCAAAAATACATAAAAAAATCAGGAAAAATAAAAAATATATAAGAAATATTTAGAAAACTCACAAACAATAAAACATCACTAAAGATCCAAAAATATGAAGCACCTATGATTCACGCAAAGTTTAGGGTTTTGAATACCATCTAATATCAAACGAAGCTAATCCATCATCACATCACATAGTATCATCATCTCCATTCACACGTACAGGTAGACAATATAATATAAAAATGGAGTATTAGGAAGTTTGGCAGTAGAATAAGACATCTAAAATATGCACGCCACATGCCAACTTAATGCGTTTTAGTTTCATGCCAGCTTCCTTCTCCATGTC
CDS Sequence
- >Zm00001eb233720_T001 ATGGGTTCCGTAGACGCGGCGATCGCGGTGCCGGTGCCGGCGGCGGAGGAGAAGGCGGTGGAGGAGAAGGCGGTGGTGTTCCGGTCCAAGCTCCCCGACATCGAGATCGACAGCAGCATGGCGCTGCACACCTACTGCTTCGGGAAGATGGGTGAGGTGGCGGAGCGGGCGTGCCTGGTCGACGGGCTGACGGGCGCGTCGTACACGTACGCGGAGGTGGAGTCCCTGTCCCGGCGCGCCGCGTCGGGGCTGCGCGCCATGGGGGTGGGCAAGGGCGACGTGGTGATGAGCCTGCTCCGCAACTGCCCCGAGTTCGCCTTCACCTTCCTGGGCGCCGCCCGCCTGGGCGCCGCCACCACCACGGCCAACCCGTTCTACACCCCGCACGAGGTGCGGGAGTTCGCGGCGGAGCGGGGCATCCCCGTGGTCACCGTCGACGGGCGCTTCGACGGCTGCGTGGAGTTCGCCGAGCTGATCGCGGCCGAGGAGCTGGAGGCCGACGCCGACATCCACCCCGACGACGTCGTCGCGCTGCCCTACTCCTCCGGCACCACCGGGCTGCCCAAGGGCGTCATGCTCACCCACCGCAGCCTCATCACCAGCGTCGCGCAGCAGGTTGATGGCGAGAACCCGAACCTGTACTTCCGCAAGGACGACGTGGTGCTGTGCCTGCTGCCGCTGTTCCACATCTACTCGCTGAACTCGGTGCTGCTGGCCGGCCTGCGCGCGGGCTCCACCATCGTGATCATGCGCAAGTTCGACCTGGGCGCGCTGGTGGACCTGGTGCGCAGGTACGTGATCACCATCGCGCCCTTCGTGCCGCCCATCGTGGTGGAGATCGCCAAGAGCCCCCGCGTGACCGCCGGCGACCTCGCGTCCATCCGCATGGTCATGTCCGGCGCCGCGCCCATGGGCAAGGAGCTCCAGGACGCCTTCATGGCCAAGATTCCCAATGCCGTGCTCGGGCAGGGGTACGGGATGACGGAGGCAGGCCCCGTGCTGGCGATGTGCCTGGCCTTCGCCAAGGAGCCGTACCCGGTCAAGTCCGGGTCGTGCGGCACCGTGGTGCGGAACGCGGAGCTGAAGATCGTCGACCCCGACACCGGCGCCGCCCTCGGCCGGAACCAGCCCGGCGAGATCTGCATCCGCGGGGAGCAGATCATGAAAGGTTACCTGAACGACCCCGAGTCGACGAAGAACACCATCGACAAGGACGGCTGGCTGCACACCGGAGACATCGGCTACGTGGACGACGACGACGAGATCTTCATCGTCGACAGGCTCAAGGAGATCATCAAGTACAAGGGCTTCCAGGTGCCGCCGGCGGAGCTGGAGGCGCTCCTCATCACGCACCCGGAGATCAAGGACGCCGCCGTCGTATCAATGAACGATGACCTTGCTGGTGAAATCCCGGTCGCCTTCATCGTGCGGACCGAAGGTTCTCAAGTCACCGAGGATGAGATCAAGCAATTCGTCGCCAAGGAGGTGGTTTTCTACAAGAAGATCCACAAGGTCTTCTTCACCGAATCCATCCCCAAGAACCCGTCGGGCAAGATCCTGAGGAAGGACTTGAGAGCCAGGCTCGCCGCCGGTGTTCACTGA
- >Zm00001eb233720_T002 ATGGGTTCCGTAGACGCGGCGATCGCGGTGCCGGTGCCGGCGGCGGAGGAGAAGGCGGTGGAGGAGAAGGCGGTGGTGTTCCGGTCCAAGCTCCCCGACATCGAGATCGACAGCAGCATGGCGCTGCACACCTACTGCTTCGGGAAGATGGGTGAGGTGGCGGAGCGGGCGTGCCTGGTCGACGGGCTGACGGGCGCGTCGTACACGTACGCGGAGGTGGAGTCCCTGTCCCGGCGCGCCGCGTCGGGGCTGCGCGCCATGGGGGTGGGCAAGGGCGACGTGGTGATGAGCCTGCTCCGCAACTGCCCCGAGTTCGCCTTCACCTTCCTGGGCGCCGCCCGCCTGGGCGCCGCCACCACCACGGCCAACCCGTTCTACACCCCGCACGAGGTGCGGGAGTTCGCGGCGGAGCGGGGCATCCCCGTGGTCACCGTCGACGGGCGCTTCGACGGCTGCGTGGAGTTCGCCGAGCTGATCGCGGCCGAGGAGCTGGAGGCCGACGCCGACATCCACCCCGACGACGTCGTCGCGCTGCCCTACTCCTCCGGCACCACCGGGCTGCCCAAGGGCGTCATGCTCACCCACCGCAGCCTCATCACCAGCGTCGCGCAGCAGGTTGATGGCGAGAACCCGAACCTGTACTTCCGCAAGGACGACGTGGTGCTGTGCCTGCTGCCGCTGTTCCACATCTACTCGCTGAACTCGGTGCTGCTGGCCGGCCTGCGCGCGGGCTCCACCATCGTGATCATGCGCAAGTTCGACCTGGGCGCGCTGGTGGACCTGGTGCGCAGGTACGTGATCACCATCGCGCCCTTCGTGCCGCCCATCGTGGTGGAGATCGCCAAGAGCCCCCGCGTGACCGCCGGCGACCTCGCGTCCATCCGCATGGTCATGTCCGGCGCCGCGCCCATGGGCAAGGAGCTCCAGGACGCCTTCATGGCCAAGATTCCCAATGCCGTGCTCGGGCAGGGGTACGGGATGACGGAGGCAGGCCCCGTGCTGGCGATGTGCCTGGCCTTCGCCAAGGAGCCGTACCCGGTCAAGTCCGGGTCGTGCGGCACCGTGGTGCGGAACGCGGAGCTGAAGATCGTCGACCCCGACACCGGCGCCGCCCTCGGCCGGAACCAGCCCGGCGAGATCTGCATCCGCGGGGAGCAGATCATGAAAGGTTACCTGAACGACCCCGAGTCGACGAAGAACACCATCGACAAGGACGGCTGGCTGCACACCGGAGACATCGGCTACGTGGACGACGACGACGAGATCTTCATCGTCGACAGGCTCAAGGAGATCATCAAGTACAAGGGCTTCCAGGTGCCGCCGGCGGAGCTGGAGGCGCTCCTCATCACGCACCCGGAGATCAAGGACGCCGCCGTCGTATCAATGAACGATGACCTTGCTGGTGAAATCCCGGTCGCCTTCATCGTGCGGACCGAAGGTTCTCAAGTCACCGAGGATGAGATCAAGCAATTCGTCGCCAAGGAGGTGGTTTTCTACAAGAAGATCCACAAGGTCTTCTTCACCGAATCCATCCCCAAGAACCCGTCGGGCAAGATCCTGAGGAAGGACTTGAGAGCCAGGCTCGCCGCCGGTGTTCACTGA
Protein Sequence
- >Zm00001eb233720_P001 MGSVDAAIAVPVPAAEEKAVEEKAVVFRSKLPDIEIDSSMALHTYCFGKMGEVAERACLVDGLTGASYTYAEVESLSRRAASGLRAMGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTANPFYTPHEVREFAAERGIPVVTVDGRFDGCVEFAELIAAEELEADADIHPDDVVALPYSSGTTGLPKGVMLTHRSLITSVAQQVDGENPNLYFRKDDVVLCLLPLFHIYSLNSVLLAGLRAGSTIVIMRKFDLGALVDLVRRYVITIAPFVPPIVVEIAKSPRVTAGDLASIRMVMSGAAPMGKELQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPYPVKSGSCGTVVRNAELKIVDPDTGAALGRNQPGEICIRGEQIMKGYLNDPESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH
- >Zm00001eb233720_P002 MGSVDAAIAVPVPAAEEKAVEEKAVVFRSKLPDIEIDSSMALHTYCFGKMGEVAERACLVDGLTGASYTYAEVESLSRRAASGLRAMGVGKGDVVMSLLRNCPEFAFTFLGAARLGAATTTANPFYTPHEVREFAAERGIPVVTVDGRFDGCVEFAELIAAEELEADADIHPDDVVALPYSSGTTGLPKGVMLTHRSLITSVAQQVDGENPNLYFRKDDVVLCLLPLFHIYSLNSVLLAGLRAGSTIVIMRKFDLGALVDLVRRYVITIAPFVPPIVVEIAKSPRVTAGDLASIRMVMSGAAPMGKELQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPYPVKSGSCGTVVRNAELKIVDPDTGAALGRNQPGEICIRGEQIMKGYLNDPESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMNDDLAGEIPVAFIVRTEGSQVTEDEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGVH