Gene Details:
- Gene ID: Zm00001eb396030
- Gene Symbol: PhyB2 pge(phyB2)
- Gene Name: phytochromeB2
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- PHYB1 and not PhyB2 contributes significantly to the inhibition of mesocotyl elongation under red light, whereas PhyB2 and to a lesser extent PHYB1 mediate the photoperiod-dependent floral transition.
- Subfunctionalization of PhyB1 and PhyB2 in the control of seedling and mature plant traits in maize.
- We show that the highly similar PhyB1 and PhyB2 genes encode proteins with both overlapping and non-redundant functions that control seedling and mature plant traits.
- PhyB2 and to a lesser extent PHYB1 mediate the photoperiod-dependent floral transition.
- PHYB1 and PhyB2 regulate several aspects of seedling development, including mesocotyl elongation and chloroplast gene expression.
Function-related keywords:
Literature:
- Subfunctionalization of PhyB1 and PhyB2 in the control of seedling and mature plant traits in maize. DOI: 10.1111/j.1365-313X.2006.02962.x ; PMID: 17181778
- Breeding maize of ideal plant architecture for high-density planting tolerance through modulating shade avoidance response and beyond. DOI: 10.1111/jipb.13603 ; PMID: 38131117
Related News:
Gene Resources:
- NCBI ID: LOC100381811
- UniProt accessions: A0A317YJ19 , Q6XFQ2
Sequences:
cDNA Sequence
- >Zm00001eb396030_T001 TGAAGCAAAGCTAAGGTATCGGACGAACACATAGGGGGCGAGCGAGCCGACTGACGAGCACAAGACCGGCGGACGGGGCCGCCTAATCCAGTGAGAGCTCCCCCAAGCGCCATGGCGTCGGACAGTCGCCCCCCCAAGCGCTCCCCCTCCGCGCGACGCGTGGCGCCGCGTCACGCGCACCACCACCACTCGCAGTCGTCGGGCGGGAGCACGTCCCGCGCAGGCGCGGGAGGAGGTGGCGGGGGCGCTGCGGCCACGGAGTCGGTCTCCAAGGCCGTCGCTCAGTACAACCTAGACGCGCGGCTCCACGCGGTGTTCGAGCAGTCGGGCGCGTCGGGCCGCAGCTTCGACTACTCCCAGTCGCTGCGCGCGCCGCCCACGCCGTCCTCCGAGCAGCAGATCGCCGCCTACCTCTCACGCATCCAGCGCGGCGGCCACATCCAGCCCTTGGGCTGCACGCTCGCCGTCGCCGACGACTCCTCCTTCCGCCTCCTCGCCTTCTCTGAGAACGCCGCCGACCTGCTCGACCTGTCGCCGCACCACTCCGTTCCCTCGCTCGACTCCGTGGCGCTGCCCCCTGTTTCCCTTGGTGCCGACGCACGCCTCTACTTCTCCCCCTCGTCCGCGGTCCTGCTGGAGCGCGCCTTCGCCGCGCGCGAGATATCGCTGCTCAACCCGCTATGGATCCACTCCAGGGCCTCCTCCAAGCCGTTCTACGCCATCCTCCACCGCATCGACGTCGGCGTCGTCATCGACCTCGAGCCCGCACGCACCGAGGACCCCGCTCTCTCCATCGCCGGCGCAGTCCAGTCCCAGAAACTCGCGGTCCGCGCCATCTCCCGCCTCCAGGCGCTACCCGGCGGGGACGTCAAGCTCCTATGCGACACAGTCGTGGAGCATGTTCGCGAGCTCACTGGTTACGACCGTGTCATGGTGTACAAGTTCCATGAAGACGAGCACGGGGAAGTTGTCGCAGAGAGCCGGCGCGATAACCTTGAGCCTTACCTCGGATTGCATTATCCCGCCACAGATATCCCCCAGGCGTCGCGGTTCCTGTTCCAGCAGAACCGCGTGCGAATGATCGCAGACTGCCATGCCATCCCGGTGAGAGTCATACAAGATCCTGGGCTGTCGCAGCAGCTGTGTTTGGTAGGCTCCACGCTACGCGCTCCGCACGGGTGCCATGCACAGTACATGGCGAACATGGGGTCAATTGCGTCGCTTGTTATGGCAGTCATCATTAGCAGTGGTGGTGACGACGAGCGAACAGGTCGGGGTGCCATCTCCTCATCAATGAAGTTGTGGGGGTTAGTGGTGTGCCACCATACATCACCACGGTGTATCCCTTTTCCATTGAGGTATGCTTGCGAGTTTCTCATGCAGGCATTTGGGCTGCAGCTCAACATGGAGTTGCAGCTTGCGCACCAGCTGTCAGAGAAGCACATTTTGCGAACTCAGACGCTATTGTGTGACATGCTACTGCGAGATTCACCAGCTGGCATCATCACGCAGAGCCCCAGCGTCATGGACCTTGTGAAGTGCGATGGGGCTGCACTGTATTATCGTGGGAAGTACTACCCATTGGGTGTCACTCCCACCGAGTCTCAGATTAAGGATATTATCGAGTGGTTGACGGTGTGTCATGGGGACTCAACAGGGCTCAGCACAGATAGCCTTGCTGATGCAGGCTACCTTGGTGCTGTTGCATTAGGGGATGCTGTGTGTGGAATGGCGGTGGCTTATATAACACCAAGTGATTACTTGTTTTGGTTTAGGTCACACACAGCTAAAGAGATCAAATGGGGTGGCGCAAAACATCACCCTGAGGATAAGGATGATGGTCAGAGGATGCACCCACGGTCATCATTCAAGGCATTTCTTGAAGTGGTTAAAAGCAGAAGCCTGTCCTGGGAGAATGCAGAAATGGACGCAATACATTCCTTGCAGCTCATATTGCGTGACTCCTTCAGAGATGCTGCAGAGGGCACTAGCAACTCAAAAGCCATTGTCAATGGACAACGTCAACTTGGGGAGCTAGAATTGCGGGGGATAAATGAGCTTAGCTCTGTAGCAAGAGAGATGGTTCGATTGATAGAGACAGCAACAGTACCCATATTTGCAGTAGATACTGATGGATGCATAAATGGGTGGAATGCAAAGATTGCCGAGTTGACAGGCCTTTCAGTTGAGGAGGCAATGGGCAAATCTCTGGTAAATGATCTTATCTTCAAGGAATGTGATGATATAGTCGAAAAGCTACTCTCGCGAGCTTTAAGAGGTGAGGAAGACAAAAATGTGGAGATAAAGCTGAAGACATTTGGGTCAGAGCAATCTAAGGGTGCAATATTTGTTATTGTCAATGCTTGTTCCAGCAGAGATTACACACAAAATATTGTTGGTGTCTGTTTTGTTGGACAAGATGTTACAGGACAAAAGGTGGTCATGGATAAATTTATCAACATACAAGGGGACTACAAAGCTATTGTACACAATCCTAATCCTCTGCTACCCCCAATTTTCGCATCAGATGAGAACACTTCTTGTTCAGAATGGAACACAGCCATGGAAAAACTTACAGGATGGTCTAGAGAGGAAGTTGTCGGTAAGTTTCTTATTGGAGAAGTGTTTGGAAATTGTTGCCGACTCAAGGGCCCAGATGCATTGACAAAGTTCATGGTTGTCATTCACAATGCTATAGAAGGACATGATTCTGAGAAGTTCCCTTTTTCATTTTTCGACAAGAATGGAAAGTATGTGCAGGCCTTATTGACGGCCAACACAAGGAGCAAAATGGATGGTAAATCTATTGGAGCCTTTTGTTTCTTGCAGATTGCAAGCGCTGAAATACAGCAGGCATTTGAGATTCAGAGACAACAAGAAAAGAAGTGTTATGCAAGGATGAAAGAATTGGCCTATATTTGCCAGGAGATAAAGAATCCTCTTAGTGGCATCCGGTTTACCAACTCTCTATTGCAGATGACTGATTTAAATGATGACCAGAGGCAGTTCCTTGAAACTAGCTCTGCTTGTGAGAAACAGATGTCCAAGATTGTTAAGGATGCCAGTCTCAAAAGTATTGAGGATGGCTCTTTGGTGCTTGAGAAAAGTGAGTTTTCTCTTGGAGACGTTATGAATGCTGTTGTCAGCCAAACAATGTCATTGTTGAGGGAGAGGGATTTACAACTTATTCGAGATATCCCTGATGAAATCAAGGATGCATCAGCATATGGTGATCAATTTAGAATCCAACAAGTTTTGGCTGACTTCTTGCTAAGCATGGCACAGTCTGCTCCATCCGAGAATGGCTGGGTAGAAATACAAGTCAGACCAAATGTAAAACAGAATTATGACGGAACAGATACAGAGCTTTTCATCTTCAGGTTTGCCTGCCCTGGTGAGGGCCTCCCCGCTGACATTGTCCAGGATATGTTCAGCAATTCCCAATGGTCAACCCAAGAAGGCGTAGGACTAAGCACATGCAGGAAAATCCTCAAATTGATGGGCGGCGAGGTCCAATACATCAGGGAGTCAGAGCGGAGTTTCTTCCTCATCGTCCTTGAGCTGCCCCAACCTCGTCTAGCAGCTGGTAGAGAAAATCAGCTGATATGTTAAGATCTGCGCTGACACCACCTAACTTCTAGGTCGATTAGGTAACTTAGGTGGTGTTTGTTTGGGATTATAATCTGCCTAAATTATATAATCAGTGTTAGTTCAAAATAAGGTAGATTATATAATCTGGTCAGATTATAATCCCAAACAAATAGACCCTTAGCTCCCTGATAAGAGGGTGCCTAATTTACAAGAAGCCTGGAAACAAATGAATGCTGCCATGGCAATTCAATGGTTGAGTGTTGATGAGGAGGCTGTTTTTCGGTGCGCCGCTGTAAGTTTGGGTATCCATGCTGTGGTTTCAAGATCAGAGTTCATGGCAGATAGTTATGTACACAGGCGGCAAATTTGGTTCTTAGCTTAGGTTGATGACCAGTTTCACTTAGTACATCTTATATGTATACTAGGTGGATGCCCGTGCGTTGCAACGGGAAGATAAAATATCACGATAACTCATGTACAAATATGTTATAATATTATAGAAAAAGGTTACAAATGTGTTATAATGTTTAGG
CDS Sequence
- >Zm00001eb396030_T001 ATGGCGTCGGACAGTCGCCCCCCCAAGCGCTCCCCCTCCGCGCGACGCGTGGCGCCGCGTCACGCGCACCACCACCACTCGCAGTCGTCGGGCGGGAGCACGTCCCGCGCAGGCGCGGGAGGAGGTGGCGGGGGCGCTGCGGCCACGGAGTCGGTCTCCAAGGCCGTCGCTCAGTACAACCTAGACGCGCGGCTCCACGCGGTGTTCGAGCAGTCGGGCGCGTCGGGCCGCAGCTTCGACTACTCCCAGTCGCTGCGCGCGCCGCCCACGCCGTCCTCCGAGCAGCAGATCGCCGCCTACCTCTCACGCATCCAGCGCGGCGGCCACATCCAGCCCTTGGGCTGCACGCTCGCCGTCGCCGACGACTCCTCCTTCCGCCTCCTCGCCTTCTCTGAGAACGCCGCCGACCTGCTCGACCTGTCGCCGCACCACTCCGTTCCCTCGCTCGACTCCGTGGCGCTGCCCCCTGTTTCCCTTGGTGCCGACGCACGCCTCTACTTCTCCCCCTCGTCCGCGGTCCTGCTGGAGCGCGCCTTCGCCGCGCGCGAGATATCGCTGCTCAACCCGCTATGGATCCACTCCAGGGCCTCCTCCAAGCCGTTCTACGCCATCCTCCACCGCATCGACGTCGGCGTCGTCATCGACCTCGAGCCCGCACGCACCGAGGACCCCGCTCTCTCCATCGCCGGCGCAGTCCAGTCCCAGAAACTCGCGGTCCGCGCCATCTCCCGCCTCCAGGCGCTACCCGGCGGGGACGTCAAGCTCCTATGCGACACAGTCGTGGAGCATGTTCGCGAGCTCACTGGTTACGACCGTGTCATGGTGTACAAGTTCCATGAAGACGAGCACGGGGAAGTTGTCGCAGAGAGCCGGCGCGATAACCTTGAGCCTTACCTCGGATTGCATTATCCCGCCACAGATATCCCCCAGGCGTCGCGGTTCCTGTTCCAGCAGAACCGCGTGCGAATGATCGCAGACTGCCATGCCATCCCGGTGAGAGTCATACAAGATCCTGGGCTGTCGCAGCAGCTGTGTTTGGTAGGCTCCACGCTACGCGCTCCGCACGGGTGCCATGCACAGTACATGGCGAACATGGGGTCAATTGCGTCGCTTGTTATGGCAGTCATCATTAGCAGTGGTGGTGACGACGAGCGAACAGGTCGGGGTGCCATCTCCTCATCAATGAAGTTGTGGGGGTTAGTGGTGTGCCACCATACATCACCACGGTGTATCCCTTTTCCATTGAGGTATGCTTGCGAGTTTCTCATGCAGGCATTTGGGCTGCAGCTCAACATGGAGTTGCAGCTTGCGCACCAGCTGTCAGAGAAGCACATTTTGCGAACTCAGACGCTATTGTGTGACATGCTACTGCGAGATTCACCAGCTGGCATCATCACGCAGAGCCCCAGCGTCATGGACCTTGTGAAGTGCGATGGGGCTGCACTGTATTATCGTGGGAAGTACTACCCATTGGGTGTCACTCCCACCGAGTCTCAGATTAAGGATATTATCGAGTGGTTGACGGTGTGTCATGGGGACTCAACAGGGCTCAGCACAGATAGCCTTGCTGATGCAGGCTACCTTGGTGCTGTTGCATTAGGGGATGCTGTGTGTGGAATGGCGGTGGCTTATATAACACCAAGTGATTACTTGTTTTGGTTTAGGTCACACACAGCTAAAGAGATCAAATGGGGTGGCGCAAAACATCACCCTGAGGATAAGGATGATGGTCAGAGGATGCACCCACGGTCATCATTCAAGGCATTTCTTGAAGTGGTTAAAAGCAGAAGCCTGTCCTGGGAGAATGCAGAAATGGACGCAATACATTCCTTGCAGCTCATATTGCGTGACTCCTTCAGAGATGCTGCAGAGGGCACTAGCAACTCAAAAGCCATTGTCAATGGACAACGTCAACTTGGGGAGCTAGAATTGCGGGGGATAAATGAGCTTAGCTCTGTAGCAAGAGAGATGGTTCGATTGATAGAGACAGCAACAGTACCCATATTTGCAGTAGATACTGATGGATGCATAAATGGGTGGAATGCAAAGATTGCCGAGTTGACAGGCCTTTCAGTTGAGGAGGCAATGGGCAAATCTCTGGTAAATGATCTTATCTTCAAGGAATGTGATGATATAGTCGAAAAGCTACTCTCGCGAGCTTTAAGAGGTGAGGAAGACAAAAATGTGGAGATAAAGCTGAAGACATTTGGGTCAGAGCAATCTAAGGGTGCAATATTTGTTATTGTCAATGCTTGTTCCAGCAGAGATTACACACAAAATATTGTTGGTGTCTGTTTTGTTGGACAAGATGTTACAGGACAAAAGGTGGTCATGGATAAATTTATCAACATACAAGGGGACTACAAAGCTATTGTACACAATCCTAATCCTCTGCTACCCCCAATTTTCGCATCAGATGAGAACACTTCTTGTTCAGAATGGAACACAGCCATGGAAAAACTTACAGGATGGTCTAGAGAGGAAGTTGTCGGTAAGTTTCTTATTGGAGAAGTGTTTGGAAATTGTTGCCGACTCAAGGGCCCAGATGCATTGACAAAGTTCATGGTTGTCATTCACAATGCTATAGAAGGACATGATTCTGAGAAGTTCCCTTTTTCATTTTTCGACAAGAATGGAAAGTATGTGCAGGCCTTATTGACGGCCAACACAAGGAGCAAAATGGATGGTAAATCTATTGGAGCCTTTTGTTTCTTGCAGATTGCAAGCGCTGAAATACAGCAGGCATTTGAGATTCAGAGACAACAAGAAAAGAAGTGTTATGCAAGGATGAAAGAATTGGCCTATATTTGCCAGGAGATAAAGAATCCTCTTAGTGGCATCCGGTTTACCAACTCTCTATTGCAGATGACTGATTTAAATGATGACCAGAGGCAGTTCCTTGAAACTAGCTCTGCTTGTGAGAAACAGATGTCCAAGATTGTTAAGGATGCCAGTCTCAAAAGTATTGAGGATGGCTCTTTGGTGCTTGAGAAAAGTGAGTTTTCTCTTGGAGACGTTATGAATGCTGTTGTCAGCCAAACAATGTCATTGTTGAGGGAGAGGGATTTACAACTTATTCGAGATATCCCTGATGAAATCAAGGATGCATCAGCATATGGTGATCAATTTAGAATCCAACAAGTTTTGGCTGACTTCTTGCTAAGCATGGCACAGTCTGCTCCATCCGAGAATGGCTGGGTAGAAATACAAGTCAGACCAAATGTAAAACAGAATTATGACGGAACAGATACAGAGCTTTTCATCTTCAGGTTTGCCTGCCCTGGTGAGGGCCTCCCCGCTGACATTGTCCAGGATATGTTCAGCAATTCCCAATGGTCAACCCAAGAAGGCGTAGGACTAAGCACATGCAGGAAAATCCTCAAATTGATGGGCGGCGAGGTCCAATACATCAGGGAGTCAGAGCGGAGTTTCTTCCTCATCGTCCTTGAGCTGCCCCAACCTCGTCTAGCAGCTGGTAGAGAAAATCAGCTGATATGTTAA
Protein Sequence
- >Zm00001eb396030_P001 MASDSRPPKRSPSARRVAPRHAHHHHSQSSGGSTSRAGAGGGGGGAAATESVSKAVAQYNLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQRGGHIQPLGCTLAVADDSSFRLLAFSENAADLLDLSPHHSVPSLDSVALPPVSLGADARLYFSPSSAVLLERAFAAREISLLNPLWIHSRASSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLAVRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHEDEHGEVVAESRRDNLEPYLGLHYPATDIPQASRFLFQQNRVRMIADCHAIPVRVIQDPGLSQQLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDERTGRGAISSSMKLWGLVVCHHTSPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPAGIITQSPSVMDLVKCDGAALYYRGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAGYLGAVALGDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLSWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQRQLGELELRGINELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIFKECDDIVEKLLSRALRGEEDKNVEIKLKTFGSEQSKGAIFVIVNACSSRDYTQNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLLPPIFASDENTSCSEWNTAMEKLTGWSREEVVGKFLIGEVFGNCCRLKGPDALTKFMVVIHNAIEGHDSEKFPFSFFDKNGKYVQALLTANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSLLQMTDLNDDQRQFLETSSACEKQMSKIVKDASLKSIEDGSLVLEKSEFSLGDVMNAVVSQTMSLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMAQSAPSENGWVEIQVRPNVKQNYDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLSTCRKILKLMGGEVQYIRESERSFFLIVLELPQPRLAAGRENQLIC