Gene Details:

Functional Descriptions:

  • The maize (Zea mays) RNA binding motif protein 48 (RBM48) is a U12 splicing factor that functions to promote cell differentiation and repress cell proliferation.
  • Protein-protein interactions between RBM48, RGH3, and U2 Auxiliary Factor (U2AF) subunits suggest major and minor spliceosome factors required for intron recognition form complexes with RBM48.
  • RBM48 is likely to function in U12 splicing throughout eukaryotes and that U12 splicing promotes endosperm cell differentiation in maize.
  • RBM48 mutations disrupt maize seed development.
  • RBM48 Disrupts Endosperm Cellular Development.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >Zm00001eb209860_T004 CCCACCGCCACCGCCACCGCCGTCCCGCTCCACGCGTCCGCACCCTCTGCGCGGCGCCGGTCGAGAACTCGTGATGCCCCGCGACCGCGACGAGCCAGCCGCCGTGCGCGTCTACACCGTCTGCGACGAGTCCAGGTGCACGCCCATGGATGCAGAGGACTCTGAGCCCTACACTGACGTCTTCTTCGTCAAGTTCTCACAGGTCAACAACGCCAGGTTTGCAAAGAGGAAGCTTGACGAGTCTGTGTTTCTTGGCAACCGCCTGCAGGTGACCTATGCCCCTCAATTTGAGAGCCCTCAAGATACCAAGGAGAAACTGGAAGTTAGGAGAAAAGAAGTCCTTGGCCGAATAAAATCATCTGCTGGCAGACCTGAAGGATCATCTCCAGCTCAGGGATCATCTAGTGGGAATCACCACCAAATGAACTCTAATAAGAGGGAATATATGAAGACAATTCATGCTTCTCCTATTGAAGATCCTCGTTTCAGTCATGTGTCCTCAGACAAGGATTATTTTCCATCCGAGTCGATGAATGCTACTGTAAAGCTAGTCAGAGGGAAGCTTGATAAGATACAATCTGGTGGTGATAATTCCAGTACCTCAGCAGCATCCAGGAAACCAGGGGTTGATAAGCGCAGGCGAATTTGATTGCAGATAATGCCGAGCACGCGTTCAATGTTTTGGTGTAATGTTGATATTAGCATAACATACCAGGATTTTAATGGACTTTTTTCTATCAATTTTCTCACTCACATTCTAG
  • >Zm00001eb209860_T001 CCCACCGCCACCGCCACCGCCGTCCCGCTCCACGCGTCCGCACCCTCTGCGCGGCGCCGGTCGAGAACTCGTGATGCCCCGCGACCGCGACGAGCCAGCCGCCGTGCGCGTCTACACCGTCTGCGACGAGTCCAGGTGCACGCCCATGGATGCAGAGGACTCTGAGCCCTACACTGACGTCTTCTTCGTCAAGTTCTCACAGGTCAACAACGCCAGGTTTGCAAAGAGGAAGCTTGACGAGTCTGTGTTTCTTGGCAACCGCCTGCAGGTGACCTATGCCCCTCAATTTGAGAGCCCTCAAGATACCAAGGAGAAACTGGAAGTTAGGAGAAAAGAAGTCCTTGGCCGAATAAAATCATCTGCTGGCAGACCTGAAGGATCATCTCCAGCTCAGGGATCATCTAGTGGGAATCACCACCAAATGAACTCTAATAAGAGGGAATATATGAAGACAATTCATGCTTCTCCTATTGAAGATCCTCGTTTCAGTCATGTGTCCTCAGACAAGGATTATTTTCCATCCGAGTCGATGAATGCTACTGTAAAGCTAGTCAGAGGGAAGCTTGATAAGATACAATCTGGTGGTGATAATTCCAGTACCTCAGCAGCATCCAGGAAACCAGGGGTTGATAAGCGCAGGCGAATTTGATTGCAGATAATGCCGAGCACGCGTTCAATGTTTTGGTGTAATGTTGATATTAGCATAACATACCAGGATTTTAATGGACTTTTTTCTATCAATTTTCTCACTCACATTCTAG
  • >Zm00001eb209860_T003 CCCACCGCCACCGCCACCGCCGTCCCGCTCCACGCGTCCGCACCCTCTGCGCGGCGCCGGTCGAGAACTCGTGATGCCCCGCGACCGCGACGAGCCAGCCGCCGTGCGCGTCTACACCGTCTGCGACGAGTCCAGGTGCACGCCCATGGATGCAGAGGACTCTGAGCCCTACACTGACGTCTTCTTCGTCAAGTTCTCACAGGTCAACAACGCCAGGTTTGCAAAGAGGAAGCTTGACGAGTCTGTGTTTCTTGGCAACCGCCTGCAGGTGACCTATGCCCCTCAATTTGAGAGCCCTCAAGATACCAAGGAGAAACTGGAAGTTAGGAGAAAAGAAGTCCTTGGCCGAATAAAATCATCTGCTGGCAGACCTGAAGGATCATCTCCAGCTCAGGGATCATCTAGTGGGAATCACCACCAAATGAACTCTAATAAGAGGGAATATATGAAGACAATTCATGCTTCTCCTATTGAAGATCCTCGTTTCAGTCATGTGTCCTCAGACAAGGATTATTTTCCATCCGAGTCGATGAATGCTACTGTAAAGCTAGTCAGAGGGAAGCTTGATAAGATACAATCTGGTGGTGATAATTCCAGTACCTCAGCAGCATCCAGGAAACCAGGGGTTGATAAGCGCAGGCGAATTTGATTGCAGATAATGCCGAGCACGCGTTCAATGTTTTGGTGTAATGTTGATATTAGCATAACATACCAGGATTTTAATGGACTTTTTTCTATCAATTTTCTCACTCACATTCTAG
  • >Zm00001eb209860_T002 CCCACCGCCACCGCCACCGCCGTCCCGCTCCACGCGTCCGCACCCTCTGCGCGGCGCCGGTCGAGAACTCGTGATGCCCCGCGACCGCGACGAGCCAGCCGCCGTGCGCGTCTACACCGTCTGCGACGAGTCCAGGTGCACGCCCATGGATGCAGAGGACTCTGAGCCCTACACTGACGTCTTCTTCGTCAAGTTCTCACAGGTCAACAACGCCAGGTTTGCAAAGAGGAAGCTTGACGAGTCTGTGTTTCTTGGCAACCGCCTGCAGGTGACCTATGCCCCTCAATTTGAGAGCCCTCAAGATACCAAGGAGAAACTGGAAGTTAGGAGAAAAGAAGTCCTTGGCCGAATAAAATCATCTGCTGGCAGACCTGAAGGATCATCTCCAGCTCAGGGATCATCTAGTGGGAATCACCACCAAATGAACTCTAATAAGAGGGAATATATGAAGACAATTCATGCTTCTCCTATTGAAGATCCTCGTTTCAGTCATGTGTCCTCAGACAAGGATTATTTTCCATCCGAGTCGATGAATGCTACTGTAAAGCTAGTCAGAGGGAAGCTTGATAAGATACAATCTGGTGGTGATAATTCCAGTACCTCAGCAGCATCCAGGAAACCAGGGGTTGATAAGCGCAGGCGAATTTGATTGCAGATAATGCCGAGCACGCGTTCAATGTTTTGGTGTAATGTTGATATTAGCATAACATACCAGGATTTTAATGGACTTTTTTCTATCAATTTTCTCACTCACATTCTAG
CDS Sequence
  • >Zm00001eb209860_T004 ATGCCCCGCGACCGCGACGAGCCAGCCGCCGTGCGCGTCTACACCGTCTGCGACGAGTCCAGGTGCACGCCCATGGATGCAGAGGACTCTGAGCCCTACACTGACGTCTTCTTCGTCAAGTTCTCACAGGTCAACAACGCCAGGTTTGCAAAGAGGAAGCTTGACGAGTCTGTGTTTCTTGGCAACCGCCTGCAGGTGACCTATGCCCCTCAATTTGAGAGCCCTCAAGATACCAAGGAGAAACTGGAAGTTAGGAGAAAAGAAGTCCTTGGCCGAATAAAATCATCTGCTGGCAGACCTGAAGGATCATCTCCAGCTCAGGGATCATCTAGTGGGAATCACCACCAAATGAACTCTAATAAGAGGGAATATATGAAGACAATTCATGCTTCTCCTATTGAAGATCCTCGTTTCAGTCATGTGTCCTCAGACAAGGATTATTTTCCATCCGAGTCGATGAATGCTACTGTAAAGCTAGTCAGAGGGAAGCTTGATAAGATACAATCTGGTGGTGATAATTCCAGTACCTCAGCAGCATCCAGGAAACCAGGGGTTGATAAGCGCAGGCGAATTTGA
  • >Zm00001eb209860_T001 ATGCCCCGCGACCGCGACGAGCCAGCCGCCGTGCGCGTCTACACCGTCTGCGACGAGTCCAGGTGCACGCCCATGGATGCAGAGGACTCTGAGCCCTACACTGACGTCTTCTTCGTCAAGTTCTCACAGGTCAACAACGCCAGGTTTGCAAAGAGGAAGCTTGACGAGTCTGTGTTTCTTGGCAACCGCCTGCAGGTGACCTATGCCCCTCAATTTGAGAGCCCTCAAGATACCAAGGAGAAACTGGAAGTTAGGAGAAAAGAAGTCCTTGGCCGAATAAAATCATCTGCTGGCAGACCTGAAGGATCATCTCCAGCTCAGGGATCATCTAGTGGGAATCACCACCAAATGAACTCTAATAAGAGGGAATATATGAAGACAATTCATGCTTCTCCTATTGAAGATCCTCGTTTCAGTCATGTGTCCTCAGACAAGGATTATTTTCCATCCGAGTCGATGAATGCTACTGTAAAGCTAGTCAGAGGGAAGCTTGATAAGATACAATCTGGTGGTGATAATTCCAGTACCTCAGCAGCATCCAGGAAACCAGGGGTTGATAAGCGCAGGCGAATTTGA
  • >Zm00001eb209860_T003 ATGCCCCGCGACCGCGACGAGCCAGCCGCCGTGCGCGTCTACACCGTCTGCGACGAGTCCAGGTGCACGCCCATGGATGCAGAGGACTCTGAGCCCTACACTGACGTCTTCTTCGTCAAGTTCTCACAGGTCAACAACGCCAGGTTTGCAAAGAGGAAGCTTGACGAGTCTGTGTTTCTTGGCAACCGCCTGCAGGTGACCTATGCCCCTCAATTTGAGAGCCCTCAAGATACCAAGGAGAAACTGGAAGTTAGGAGAAAAGAAGTCCTTGGCCGAATAAAATCATCTGCTGGCAGACCTGAAGGATCATCTCCAGCTCAGGGATCATCTAGTGGGAATCACCACCAAATGAACTCTAATAAGAGGGAATATATGAAGACAATTCATGCTTCTCCTATTGAAGATCCTCGTTTCAGTCATGTGTCCTCAGACAAGGATTATTTTCCATCCGAGTCGATGAATGCTACTGTAAAGCTAGTCAGAGGGAAGCTTGATAAGATACAATCTGGTGGTGATAATTCCAGTACCTCAGCAGCATCCAGGAAACCAGGGGTTGATAAGCGCAGGCGAATTTGA
  • >Zm00001eb209860_T002 ATGCCCCGCGACCGCGACGAGCCAGCCGCCGTGCGCGTCTACACCGTCTGCGACGAGTCCAGGTGCACGCCCATGGATGCAGAGGACTCTGAGCCCTACACTGACGTCTTCTTCGTCAAGTTCTCACAGGTCAACAACGCCAGGTTTGCAAAGAGGAAGCTTGACGAGTCTGTGTTTCTTGGCAACCGCCTGCAGGTGACCTATGCCCCTCAATTTGAGAGCCCTCAAGATACCAAGGAGAAACTGGAAGTTAGGAGAAAAGAAGTCCTTGGCCGAATAAAATCATCTGCTGGCAGACCTGAAGGATCATCTCCAGCTCAGGGATCATCTAGTGGGAATCACCACCAAATGAACTCTAATAAGAGGGAATATATGAAGACAATTCATGCTTCTCCTATTGAAGATCCTCGTTTCAGTCATGTGTCCTCAGACAAGGATTATTTTCCATCCGAGTCGATGAATGCTACTGTAAAGCTAGTCAGAGGGAAGCTTGATAAGATACAATCTGGTGGTGATAATTCCAGTACCTCAGCAGCATCCAGGAAACCAGGGGTTGATAAGCGCAGGCGAATTTGA
Protein Sequence
  • >Zm00001eb209860_P004 MPRDRDEPAAVRVYTVCDESRCTPMDAEDSEPYTDVFFVKFSQVNNARFAKRKLDESVFLGNRLQVTYAPQFESPQDTKEKLEVRRKEVLGRIKSSAGRPEGSSPAQGSSSGNHHQMNSNKREYMKTIHASPIEDPRFSHVSSDKDYFPSESMNATVKLVRGKLDKIQSGGDNSSTSAASRKPGVDKRRRI
  • >Zm00001eb209860_P001 MPRDRDEPAAVRVYTVCDESRCTPMDAEDSEPYTDVFFVKFSQVNNARFAKRKLDESVFLGNRLQVTYAPQFESPQDTKEKLEVRRKEVLGRIKSSAGRPEGSSPAQGSSSGNHHQMNSNKREYMKTIHASPIEDPRFSHVSSDKDYFPSESMNATVKLVRGKLDKIQSGGDNSSTSAASRKPGVDKRRRI
  • >Zm00001eb209860_P003 MPRDRDEPAAVRVYTVCDESRCTPMDAEDSEPYTDVFFVKFSQVNNARFAKRKLDESVFLGNRLQVTYAPQFESPQDTKEKLEVRRKEVLGRIKSSAGRPEGSSPAQGSSSGNHHQMNSNKREYMKTIHASPIEDPRFSHVSSDKDYFPSESMNATVKLVRGKLDKIQSGGDNSSTSAASRKPGVDKRRRI
  • >Zm00001eb209860_P002 MPRDRDEPAAVRVYTVCDESRCTPMDAEDSEPYTDVFFVKFSQVNNARFAKRKLDESVFLGNRLQVTYAPQFESPQDTKEKLEVRRKEVLGRIKSSAGRPEGSSPAQGSSSGNHHQMNSNKREYMKTIHASPIEDPRFSHVSSDKDYFPSESMNATVKLVRGKLDKIQSGGDNSSTSAASRKPGVDKRRRI