Gene Details:
- Gene ID: Zm00001eb003920
- Gene Symbol: Rtcs
- Gene Name: rootless concerning crown and seminal roots1
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- Two candidate genes (rootless concerning crown and seminal roots, Rtcs and Zm00001d012781) involved in auxin signaling and flavonoid biosynthesis were identified by co-expression network analysis.
- The maize Rtcs mutant forms a primary root with lateral roots but lacks seminal and crown roots.
- The Rtcs gene, which encodes a LATERAL ORGAN BOUNDARIES (LOB) domain protein, is an auxin-responsive gene.
Function-related keywords:
- root , auxin , auxin-biosynthesis , crown , crown-root , flavonoid , lateral-root , primary-root , flavonoid-biosynthesis
Literature:
- Integrating transcriptome, co-expression and QTL-seq analysis reveals that primary root growth in maize is regulated via flavonoid biosynthesis and auxin signal transduction. DOI: 10.1093/jxb/erab177 ; PMID: 33909071
- ZmLBD2 a maize (Zea mays L.) lateral organ boundaries domain (LBD) transcription factor enhances drought tolerance in transgenic Arabidopsis thaliana. DOI: 10.3389/fpls.2022.1000149 ; PMID: 36311096
Related News:
Gene Resources:
- NCBI ID: LOC100101548
- UniProt accessions: A5H448
Sequences:
cDNA Sequence
- >Zm00001eb003920_T001 TAATCCCCTGGCCCTAATCCCCCAGCCCTGCCGTCTCCTCCTTATAAGCAATGGCGGAGGGGTCTTGCTCTTGCATTGCACCTCCGGCCACCGCGCCATAGCCCGCAGTAATTAAGCAGGCGAGAACGACGAAGAGGCGGTCACGCACCACACCGATCAATCCAGCTCGAGCGACCGATCACACGTGCAGCACAGCACAGCACAGCGGTGCTCGGCGAAGAGAGATGACGGGGTTCGGGTCACCGTGCGGGGCGTGCAAGTTCCTGCGCCGCAAGTGCGTGCGCGGCTGCGTCTTCGCGCCCTACTTCTGCCACGAGCAGGGCGCGGCGCACTTCGCCGCCATCCACAAGGTGTTCGGCGCCAGCAACGTGTCCAAGCTGCTCGCGCACCTGCCGCTCGCCGACCGCGCCGAGGCCGCCGTCACCATCTCCTACGAGGCGCAGGCGAGGCTGCGGGACCCCATCTATGGCTGCGTCGCCCACATCTTCGCGCTACAGCAGCAGGTTATGACCCTGCAGGCGCAGCTGGCGTCGCTCAAGGCGCAGGCGGCGCAGGGGCAGCAGGGCGTGCACGAAGACGCCAAGGGCTACGTGGGCAGCGCCGCCGCGGAGCAGCTAGGGTACGGCTACCCCTGGTGCAGCGGCAATGGAGGCGCCGCAGCAGCAGCAGCAGGCGCCGTGGGCGCGCCCGCCGCGCAGCCGGGCGCGTACGGCAATGGCGCGCACGAGTCCCTGACCGCGCTGCTGGGGTCGTCGGACTACATGCAGCAGTCGCTGTACCACGCGTTCGAGCAGGCCGGCGCGGACGACGACGACGGCCGGCAGGGGTACGCCTTCGAGGCAGCGGCGGAGTCCTCGTCGCTCGGGGCGGAGGAGAGCGGGTGGAGGTCGTCGTCGGGGTACCAAGACTGCGAGGACCTGCAGAGCGTGGCTTACGCTTACCTGAACCATCGCTCGTAAGAACTGAGAACTACTACTACTACAAGAGAGAGAGAGAGAGATATAGATATAGACATATCTGTCCTCAATTCCTGATCATGTTTTGGACTTTAGCCTGGGGAAATATATGCGCGATTTTCGATCGATCAGTCGATCGGTCTCCGCTACAAATAATCCAGAAGCATGCATGCATGTGACAGACCACTGATATATAATAGATCCACACATTATTGATCATCAGTGTAGAAATTAACGTACGTAGCCTAATTAATTGGACAAAGAAAATGGAGAGCCC
CDS Sequence
- >Zm00001eb003920_T001 ATGACGGGGTTCGGGTCACCGTGCGGGGCGTGCAAGTTCCTGCGCCGCAAGTGCGTGCGCGGCTGCGTCTTCGCGCCCTACTTCTGCCACGAGCAGGGCGCGGCGCACTTCGCCGCCATCCACAAGGTGTTCGGCGCCAGCAACGTGTCCAAGCTGCTCGCGCACCTGCCGCTCGCCGACCGCGCCGAGGCCGCCGTCACCATCTCCTACGAGGCGCAGGCGAGGCTGCGGGACCCCATCTATGGCTGCGTCGCCCACATCTTCGCGCTACAGCAGCAGGTTATGACCCTGCAGGCGCAGCTGGCGTCGCTCAAGGCGCAGGCGGCGCAGGGGCAGCAGGGCGTGCACGAAGACGCCAAGGGCTACGTGGGCAGCGCCGCCGCGGAGCAGCTAGGGTACGGCTACCCCTGGTGCAGCGGCAATGGAGGCGCCGCAGCAGCAGCAGCAGGCGCCGTGGGCGCGCCCGCCGCGCAGCCGGGCGCGTACGGCAATGGCGCGCACGAGTCCCTGACCGCGCTGCTGGGGTCGTCGGACTACATGCAGCAGTCGCTGTACCACGCGTTCGAGCAGGCCGGCGCGGACGACGACGACGGCCGGCAGGGGTACGCCTTCGAGGCAGCGGCGGAGTCCTCGTCGCTCGGGGCGGAGGAGAGCGGGTGGAGGTCGTCGTCGGGGTACCAAGACTGCGAGGACCTGCAGAGCGTGGCTTACGCTTACCTGAACCATCGCTCGTAA
Protein Sequence
- >Zm00001eb003920_P001 MTGFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRAEAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAQAAQGQQGVHEDAKGYVGSAAAEQLGYGYPWCSGNGGAAAAAAGAVGAPAAQPGAYGNGAHESLTALLGSSDYMQQSLYHAFEQAGADDDDGRQGYAFEAAAESSSLGAEESGWRSSSGYQDCEDLQSVAYAYLNHRS