Gene Details:
- Gene ID: Zm00001eb169710
- Gene Symbol: Ts5 ZmCYP94B1 CYP94B3a
- Gene Name: tasselseed5
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- Tasselseed5 (Ts5), is similar to that of ts2. Here, we positionally cloned the underlying gene of Ts5 and characterized its function.
- Transgenic maize plants overexpressing GRMZM2G177668 exhibited a tassel-seed phenotype similar to that of Ts5.
- Ts5 mutant phenotype results from the disruption of this peak in tassels during sex determination.
- GRMZM2G177668 is the candidate Ts5 gene, encoding a JA-Ile hydroxylase.
Function-related keywords:
- seed , ja , seed-phenotype
Literature:
- Tasselseed5 encodes a cytochrome C oxidase that functions in sex determination by affecting jasmonate catabolism in maize. DOI: 10.1111/jipb.12826 ; PMID: 31087765
Related News:
Gene Resources:
- NCBI ID: 103652921
- UniProt accessions: A0A1D6PT32 , A0A3L6F524
Sequences:
cDNA Sequence
- >Zm00001eb169710_T001 CGACGCCAAACGCAAAGAGCTCTCCACACTGCCCAGCCAGACAAACAAGTGGGGAGACCTTACCTGGCTTCCCTCCACCTCTCTCTCGCCTCCTCCCCTCTACAAAAACGTGGGCATTAACAAGGACCCCTACCCCCACCACAAAGGAGGAGGCATGGACCTCCAATGGCGACCCTGCCGACCTCGCACCGGTCCCTCCCCCTCTACCCACATATATCCCACGCGTATATGTATATATATATCGACGAATAGTGTGCGCTGTCTCTCCCATGCTTCCTCTTAGTAGGTGCTCTCTCCCTACCTCCTCCAATCCGGGCCCGGGCCCCTCTCTAGGATTCTTGTTGCACGTACACACCATGATCTGCTACGTGCTGTGGTTAGCTGCGTGCTGCCTCCTCCTCCTCTTGTACAGCGTCCGATTCAGGTCCCGCATCAGCCATGGCAACGGCCCCAGGACCTACCCGTTGATTGGCTGCCTGGTCAGCTTCTACCAGAACCGGTGGCGGCTGCTGGACTGGTACACCGAGATGCTGGCGGCGTCGCCGACGCAGACGATCGTCGTGGACCGTCTGGGCGCGCGGCGGACCGTGGTGACGGCGAACCCGGTGAACGTGGAGCACATCCTCAAGGGCAACTTCGGCAACTACCCCAAGGGGAAGCCCTTCACCGACATCCTCGGCGACCTGCTCGGCACCGGCATCTTCAACGTCGACGGCGAGCTGTGGTACGCGCAGAGGAAGCTGGTGAGCCACGAGTTCTCGGCGCGCGCGCTCAGGGACCTGGAGTTCGCCGTGCTCGAGGACGAGGCGCGGGAGCGCCTCGTGCCGGCCCTGGGCCTGGCCGCGGCGCGCGGCGACGCCGTGGACATGCAGGACCTGCTCCGCCGCTTCTCCTTCGACGTCATCTGCCGCGTGTCGCTGGGCGTTGACCCCGGCTGCCTGGACCCGGCATTGCCGGCGCCGAGGCTGGCCGCGGCGTTCGACGCGGCCGCGGGGATCATCGCCAGGCGCGGCGCCGCGCCCGTGGCCGCCGTGTGGAAGGCCAAGCGCGCGCTGGGCGTGGGCTCGGAGCGCATGCTGCGCGAGGAGATCCGGGTCATCCACGAGGCCGTCATGGACCTCATCCGCATCCGCAAGAAGGAGCGCGGCCTGCAGGTCAACGACGCCGACGGGCGGAGGAGCGACCTGCTGTCGCGGATGATCGAATGCGGGTACCCGGACGAGATGATCCGCGACATGGTGATCAGCTTCATCATGGCCGGGCGCGACACCACGTCGTCCGCGCTGACATGGTTCTTCTGGCTGCTCACCCGCCACCGCGACGTGGAACGGGAGGTCCTGCGGGAGGTCACGGGCGGCGGCGGCGCGAGCCACGCCGCAGGCGGGCAGGGCAAGATGAGCGTGCTCCACGCGGCGCTGTGCGAGACGATGCGGCTGTACCCGCCGGTGGCGTGGGACTCCAAGCACGCTGCGGCGGGCGACGTGCTGCCCGACGGCACCCGCGTGGAGCGCGGCGACCGCGTCACCTACTTCCAGTACGGGATGGGGCGGATGGAGTCCATCTGGGGCGCCAACGCCGCCGACTTCAGCGTGCAGCGCTGGCTGTCCATAGGGGAGGACAACGCGCCCCCCGCCGCGGTGGCCGGCGTGTCGCCGTTCAAGTACCCGGTGTTCCAGGCGGGGCCGCGGACGTGCCTCGGCAAGGAGATGGCCTTCGTGCAGATGAAGTTCGTGGCCAGCACCGTGCTCCGGCGGTTCGAGATCGTGCCCGTTGACGAGGGCCGCGTGCCGGTGTTCCTGCCGCTGATGACGGCGCACATGGCCGGCGGGCTCAACGTGACGGTGAGGAGAAGAGGGGAACCCATTGCCGCTGCTGCTACTCCACTCGATCCTTCTGCTGATCCAGTATTATAAATATATTTAACCCTCCTCATGTAAGTACGACAAATTAAAATCATGATTATTTAGTTCCTATTATACATAAATTATATATAATTGAAATTCATGAGGACACGCAATGTTTTTGCTGCTTATCACAGACGATAGCAGTACACTTTTGTACCTTATCGATCATGATCATATGAAAGAGATACACAGCACGCA
CDS Sequence
- >Zm00001eb169710_T001 ATGCTTCCTCTTAGTAGGTGCTCTCTCCCTACCTCCTCCAATCCGGGCCCGGGCCCCTCTCTAGGATTCTTGTTGCACGTACACACCATGATCTGCTACGTGCTGTGGTTAGCTGCGTGCTGCCTCCTCCTCCTCTTGTACAGCGTCCGATTCAGGTCCCGCATCAGCCATGGCAACGGCCCCAGGACCTACCCGTTGATTGGCTGCCTGGTCAGCTTCTACCAGAACCGGTGGCGGCTGCTGGACTGGTACACCGAGATGCTGGCGGCGTCGCCGACGCAGACGATCGTCGTGGACCGTCTGGGCGCGCGGCGGACCGTGGTGACGGCGAACCCGGTGAACGTGGAGCACATCCTCAAGGGCAACTTCGGCAACTACCCCAAGGGGAAGCCCTTCACCGACATCCTCGGCGACCTGCTCGGCACCGGCATCTTCAACGTCGACGGCGAGCTGTGGTACGCGCAGAGGAAGCTGGTGAGCCACGAGTTCTCGGCGCGCGCGCTCAGGGACCTGGAGTTCGCCGTGCTCGAGGACGAGGCGCGGGAGCGCCTCGTGCCGGCCCTGGGCCTGGCCGCGGCGCGCGGCGACGCCGTGGACATGCAGGACCTGCTCCGCCGCTTCTCCTTCGACGTCATCTGCCGCGTGTCGCTGGGCGTTGACCCCGGCTGCCTGGACCCGGCATTGCCGGCGCCGAGGCTGGCCGCGGCGTTCGACGCGGCCGCGGGGATCATCGCCAGGCGCGGCGCCGCGCCCGTGGCCGCCGTGTGGAAGGCCAAGCGCGCGCTGGGCGTGGGCTCGGAGCGCATGCTGCGCGAGGAGATCCGGGTCATCCACGAGGCCGTCATGGACCTCATCCGCATCCGCAAGAAGGAGCGCGGCCTGCAGGTCAACGACGCCGACGGGCGGAGGAGCGACCTGCTGTCGCGGATGATCGAATGCGGGTACCCGGACGAGATGATCCGCGACATGGTGATCAGCTTCATCATGGCCGGGCGCGACACCACGTCGTCCGCGCTGACATGGTTCTTCTGGCTGCTCACCCGCCACCGCGACGTGGAACGGGAGGTCCTGCGGGAGGTCACGGGCGGCGGCGGCGCGAGCCACGCCGCAGGCGGGCAGGGCAAGATGAGCGTGCTCCACGCGGCGCTGTGCGAGACGATGCGGCTGTACCCGCCGGTGGCGTGGGACTCCAAGCACGCTGCGGCGGGCGACGTGCTGCCCGACGGCACCCGCGTGGAGCGCGGCGACCGCGTCACCTACTTCCAGTACGGGATGGGGCGGATGGAGTCCATCTGGGGCGCCAACGCCGCCGACTTCAGCGTGCAGCGCTGGCTGTCCATAGGGGAGGACAACGCGCCCCCCGCCGCGGTGGCCGGCGTGTCGCCGTTCAAGTACCCGGTGTTCCAGGCGGGGCCGCGGACGTGCCTCGGCAAGGAGATGGCCTTCGTGCAGATGAAGTTCGTGGCCAGCACCGTGCTCCGGCGGTTCGAGATCGTGCCCGTTGACGAGGGCCGCGTGCCGGTGTTCCTGCCGCTGATGACGGCGCACATGGCCGGCGGGCTCAACGTGACGGTGAGGAGAAGAGGGGAACCCATTGCCGCTGCTGCTACTCCACTCGATCCTTCTGCTGATCCAGTATTATAA
Protein Sequence
- >Zm00001eb169710_P001 MLPLSRCSLPTSSNPGPGPSLGFLLHVHTMICYVLWLAACCLLLLLYSVRFRSRISHGNGPRTYPLIGCLVSFYQNRWRLLDWYTEMLAASPTQTIVVDRLGARRTVVTANPVNVEHILKGNFGNYPKGKPFTDILGDLLGTGIFNVDGELWYAQRKLVSHEFSARALRDLEFAVLEDEARERLVPALGLAAARGDAVDMQDLLRRFSFDVICRVSLGVDPGCLDPALPAPRLAAAFDAAAGIIARRGAAPVAAVWKAKRALGVGSERMLREEIRVIHEAVMDLIRIRKKERGLQVNDADGRRSDLLSRMIECGYPDEMIRDMVISFIMAGRDTTSSALTWFFWLLTRHRDVEREVLREVTGGGGASHAAGGQGKMSVLHAALCETMRLYPPVAWDSKHAAAGDVLPDGTRVERGDRVTYFQYGMGRMESIWGANAADFSVQRWLSIGEDNAPPAAVAGVSPFKYPVFQAGPRTCLGKEMAFVQMKFVASTVLRRFEIVPVDEGRVPVFLPLMTAHMAGGLNVTVRRRGEPIAAAATPLDPSADPVL