Gene Details:
- Gene ID: Zm00001eb349820
- Gene Symbol: ZmMBD101
- Gene Name: methyl binding domain101
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- ZmMBD101 is a DNA-binding protein that maintains Mutator elements chromatin in a repressive state in maize
- ZmMBD101, involved in the regulation of Mutator (Mu) genes in maize. ZmMBD101 is localized to the nucleus and contains a methyl-CpG-binding domain (MBD) and a zinc finger CW (CW) domain.
- ZmMBD101 may somehow influence H3K9me2 and H3K27me2 deposition at Mutator TIRs under UV-B conditions.
- From our data we conclude that ZmMBD101 modulates Mutator gene activity, in particular under stress conditions, and this could be by maintaining histone repressive marks at the TIRs.
Function-related keywords:
Literature:
- ZmMBD101 is a DNA-binding protein that maintains Mutator elements chromatin in a repressive state in maize. DOI: 10.1111/pce.12604 ; PMID: 26147461
Related News:
Gene Resources:
- NCBI ID: LOC542066
- UniProt accessions: Zm-B73-REFERENCE-NAM-5.0
Orthologs:
Sequences:
cDNA Sequence
- >Zm00001eb349820_T002 AGGTTTGCACTTCTTCGCGCTCTTCCTCACAGATCGATGGCACCTTGTTTTGTGGATTGATATGCGCTGTAGCTTTGGCCCCTTCTTGCCCTGGCGGCCTGCGTCGTTGATGTGGGTACTTCGTTTTGTGCCAGATACATCATTATCAGGTGTTGACTTTGTTGGATATAGTAGTGGCTCTATTAACCACTTGGTTCATCGGTTGCATCTGGTTATTTTGTTTCGAAAGAGAAAACGAAATTCTACCAAGGATTCCGTTGCCCTGTACGCGGTGCAATGCTATAAGTGCTACAAATGGAGTACGGTTCCAAAAGAAGAATTTGAGACGCTTCGTGAAAACTTCACTAAGGATCCATGGTTCTGCAGCAGACGACCAGACAGCTCTTGTGAAGACGATGCTGACATTGAGTACGACAGCAGCCGCATTTGGGTTTTGGACAAGCCCAACATACCAAAGCCTCCACCAGAGACGGAGAGGCTAGTGGTTATGAGGGGCGACTACAGCAAAATGGACACATATTATGTCATGCCCAATGGGAAGCGTGCAAGGTGTGCTGGTGATGTGGATAAGTTTCTGGAGGCAAATCCGGAGTACAAAGACCGCATATCTGCTTCGGATTTCAGCTTTGCGCCACCCAAGGTTGTTGAGGAGACTGTTTCTCACAACCCTGCCTGGCAAGCTGCCAAGGCCAAGAAGCAGGAGAAGGCAGAGGCACAAAAGTGAATGATACTCCCAACGGTGCTTGTGTTATGTTTAGATGATAGTCCGCTCAAGATCATGCCCCATCCTATCTAGTGTGTACTTGTCTATCTCGACTGAAGTCGATGTTTAGGTCTTTTTAGCTGATTTGGCTCTGCATGCTTCGTTGCAACGGAGCCCCTGCGTGTCAATTCCTGGGGAATAAATGAGATGTTGAATAAGTGCTGTAGAGTGTAGACCTGCTTTTTTATAATTAGGCCTCAAGTCATGCTTCCTTAATTTC
- >Zm00001eb349820_T001 AGGTTTGCACTTCTTCGCGCTCTTCCTCACAGATCGATGGCACCTTGTTTTGTGGATTGATATGCGCTGTAGCTTTGGCCCCTTCTTGCCCTGGCGGCCTGCGTCGTTGATGTGGGTACTTCGTTTTGTGCCAGATACATCATTATCAGGTGTTGACTTTGTTGGATATAGTAGTGGCTCTATTAACCACTTGGTTCATCGGTTGCATCTGGTTATTTTGTTTCGAAAGAGAAAACGAAATTCTACCAAGGATTCCGTTGCCCTGTACGCGGTGCAATGCTATAAGTGCTACAAATGGAGTACGGTTCCAAAAGAAGAATTTGAGACGCTTCGTGAAAACTTCACTAAGGATCCATGGTTCTGCAGCAGACGACCAGACAGCTCTTGTGAAGACGATGCTGACATTGAGTACGACAGCAGCCGCATTTGGGTTTTGGACAAGCCCAACATACCAAAGCCTCCACCAGAGACGGAGAGGCTAGTGGTTATGAGGGGCGACTACAGCAAAATGGACACATATTATGTCATGCCCAATGGGAAGCGTGCAAGGTGTGCTGGTGATGTGGATAAGTTTCTGGAGGCAAATCCGGAGTACAAAGACCGCATATCTGCTTCGGATTTCAGCTTTGCGCCACCCAAGGTTGTTGAGGAGACTGTTTCTCACAACCCTGCCTGGCAAGCTGCCAAGGCCAAGAAGCAGGAGAAGGCAGAGGCACAAAAGTGAATGATACTCCCAACGGTGCTTGTGTTATGTTTAGATGATAGTCCGCTCAAGATCATGCCCCATCCTATCTAGTGTGTACTTGTCTATCTCGACTGAAGTCGATGTTTAGGTCTTTTTAGCTGATTTGGCTCTGCATGCTTCGTTGCAACGGAGCCCCTGCGTGTCAATTCCTGGGGAATAAATGAGATGTTGAATAAGTGCTGTAGAGTGTAGACCTGCTTTTTTATAATTAGGCCTCAAGTCATGCTTCCTTAATTTC
CDS Sequence
- >Zm00001eb349820_T002 ATGCGCTGTAGCTTTGGCCCCTTCTTGCCCTGGCGGCCTGCGTCGTTGATGTGGGTACTTCGTTTTGTGCCAGATACATCATTATCAGGTGTTGACTTTGTTGGATATAGTAGTGGCTCTATTAACCACTTGGTTCATCGGTTGCATCTGGTTATTTTGTTTCGAAAGAGAAAACGAAATTCTACCAAGGATTCCGTTGCCCTGTACGCGGTGCAATGCTATAAGTGCTACAAATGGAGTACGGTTCCAAAAGAAGAATTTGAGACGCTTCGTGAAAACTTCACTAAGGATCCATGGTTCTGCAGCAGACGACCAGACAGCTCTTGTGAAGACGATGCTGACATTGAGTACGACAGCAGCCGCATTTGGGTTTTGGACAAGCCCAACATACCAAAGCCTCCACCAGAGACGGAGAGGCTAGTGGTTATGAGGGGCGACTACAGCAAAATGGACACATATTATGTCATGCCCAATGGGAAGCGTGCAAGGTGTGCTGGTGATGTGGATAAGTTTCTGGAGGCAAATCCGGAGTACAAAGACCGCATATCTGCTTCGGATTTCAGCTTTGCGCCACCCAAGGTTGTTGAGGAGACTGTTTCTCACAACCCTGCCTGGCAAGCTGCCAAGGCCAAGAAGCAGGAGAAGGCAGAGGCACAAAAGTGA
- >Zm00001eb349820_T001 ATGCGCTGTAGCTTTGGCCCCTTCTTGCCCTGGCGGCCTGCGTCGTTGATGTGGGTACTTCGTTTTGTGCCAGATACATCATTATCAGGTGTTGACTTTGTTGGATATAGTAGTGGCTCTATTAACCACTTGGTTCATCGGTTGCATCTGGTTATTTTGTTTCGAAAGAGAAAACGAAATTCTACCAAGGATTCCGTTGCCCTGTACGCGGTGCAATGCTATAAGTGCTACAAATGGAGTACGGTTCCAAAAGAAGAATTTGAGACGCTTCGTGAAAACTTCACTAAGGATCCATGGTTCTGCAGCAGACGACCAGACAGCTCTTGTGAAGACGATGCTGACATTGAGTACGACAGCAGCCGCATTTGGGTTTTGGACAAGCCCAACATACCAAAGCCTCCACCAGAGACGGAGAGGCTAGTGGTTATGAGGGGCGACTACAGCAAAATGGACACATATTATGTCATGCCCAATGGGAAGCGTGCAAGGTGTGCTGGTGATGTGGATAAGTTTCTGGAGGCAAATCCGGAGTACAAAGACCGCATATCTGCTTCGGATTTCAGCTTTGCGCCACCCAAGGTTGTTGAGGAGACTGTTTCTCACAACCCTGCCTGGCAAGCTGCCAAGGCCAAGAAGCAGGAGAAGGCAGAGGCACAAAAGTGA
Protein Sequence
- >Zm00001eb349820_P002 MRCSFGPFLPWRPASLMWVLRFVPDTSLSGVDFVGYSSGSINHLVHRLHLVILFRKRKRNSTKDSVALYAVQCYKCYKWSTVPKEEFETLRENFTKDPWFCSRRPDSSCEDDADIEYDSSRIWVLDKPNIPKPPPETERLVVMRGDYSKMDTYYVMPNGKRARCAGDVDKFLEANPEYKDRISASDFSFAPPKVVEETVSHNPAWQAAKAKKQEKAEAQK
- >Zm00001eb349820_P001 MRCSFGPFLPWRPASLMWVLRFVPDTSLSGVDFVGYSSGSINHLVHRLHLVILFRKRKRNSTKDSVALYAVQCYKCYKWSTVPKEEFETLRENFTKDPWFCSRRPDSSCEDDADIEYDSSRIWVLDKPNIPKPPPETERLVVMRGDYSKMDTYYVMPNGKRARCAGDVDKFLEANPEYKDRISASDFSFAPPKVVEETVSHNPAWQAAKAKKQEKAEAQK