Gene Details:
- Gene ID: Zm00001eb415760
- Gene Symbol: ZmCCA1a lhy1 cca2
- Gene Name: late hypocotyl elongation protein ortholog1
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- Identified a ZmCCA1 gene through homology-based cloning to be a homolog of AtCCA1/AtLHY with a conserved function, which indicated that it might be a core component of the maize circadian clock pathway.
- Overexpression of ZmCCA1a in Arabidopsis disrupted the circadian rhythm, delayed flowering, and affected expression of endogenous AtCCA1/AtLHY and related downstream genes.
- We speculate that ZmCCA1a acts as a core component of the circadian clock in maize.
Function-related keywords:
Literature:
- ZmCCA1a on Chromosome 10 of Maize Delays Flowering of Arabidopsis thaliana. DOI: 10.3389/fpls.2020.00078 ; PMID: 32153606
Related News:
Gene Resources:
- NCBI ID: 100192868
- UniProt accessions: A0A804RI93
Sequences:
cDNA Sequence
- >Zm00001eb415760_T002 ATCTCCTGTCCAGAATGCTGATGCCACGTCTGCCGCAGGAGCTGACACGACTGATGCATTCATGAATAAGAAAAAGCAGGACCGCTCTTCATGCGGTTCTAACACACCTTCAAGTAGTGATGTAGATGTGGACAATGTCCCTGAGAAAGAGGGCAATGGTAATGAGAAGGCGAAGCAAGCCTCCTGCAGCAACTCTTCAGCTGGTGACACTAACCACCGCAGATTTAGAAGCAGTGGAAGCACGAGTGATTCATGGAAGGAAGTTTCCGAAGAGGGTCGTCTGGCTTTCCATGCGCTGTTCAGTAGAGAAAAGCTTCCGCAAAGCTTTTCTCCCCCACAAGCAGAAGGCTCGAAGGAAGTTGGCAAGGAGGAGGAAGATGAAGTCACCACAGTGGCAGTTGACCTCAACAAGAGTACCACAAGCATTGATCATGACCTCGACACAATTGGCTTCAAACCATACAAGAGATGTTCTGTGGAAGCGAAGGAGAATAGGGTGCCGGCTAGCGACGAGGTTGGTACCAAGAGGATTCGTCTTGATAGTGAAGCATCAACATGAGCGATTTCTACATGGTTACCGCTCGGACTTCCTCTGCCGCCATGAAGTTTATGACAAAGTTGTATTTACATCTAAACTAG
- >Zm00001eb415760_T001 ATCTCCTGTCCAGAATGCTGATGCCACGTCTGCCGCAGGAGCTGACACGACTGATGCATTCATGAATAAGAAAAAGCAGGACCGCTCTTCATGCGGTTCTAACACACCTTCAAGTAGTGATGTAGATGTGGACAATGTCCCTGAGAAAGAGGGCAATGGTAATGAGAAGGCGAAGCAAGCCTCCTGCAGCAACTCTTCAGCTGGTGACACTAACCACCGCAGATTTAGAAGCAGTGGAAGCACGAGTGATTCATGGAAGGAAGTTTCCGAAGAGGGTCGTCTGGCTTTCCATGCGCTGTTCAGTAGAGAAAAGCTTCCGCAAAGCTTTTCTCCCCCACAAGCAGAAGGCTCGAAGGAAGTTGGCAAGGAGGAGGAAGATGAAGTCACCACAGTGGCAGTTGACCTCAACAAGAGTACCACAAGCATTGATCATGACCTCGACACAATTGGCTTCAAACCATACAAGAGATGTTCTGTGGAAGCGAAGGAGAATAGGGTGCCGGCTAGCGACGAGGTTGGTACCAAGAGGATTCGTCTTGATAGTGAAGCATCAACATGAGCGATTTCTACATGGTTACCGCTCGGACTTCCTCTGCCGCCATGAAGTTTATGACAAAGTTGTATTTACATCTAAACTAG
CDS Sequence
- >Zm00001eb415760_T002 ATGAATAAGAAAAAGCAGGACCGCTCTTCATGCGGTTCTAACACACCTTCAAGTAGTGATGTAGATGTGGACAATGTCCCTGAGAAAGAGGGCAATGGTAATGAGAAGGCGAAGCAAGCCTCCTGCAGCAACTCTTCAGCTGGTGACACTAACCACCGCAGATTTAGAAGCAGTGGAAGCACGAGTGATTCATGGAAGGAAGTTTCCGAAGAGGGTCGTCTGGCTTTCCATGCGCTGTTCAGTAGAGAAAAGCTTCCGCAAAGCTTTTCTCCCCCACAAGCAGAAGGCTCGAAGGAAGTTGGCAAGGAGGAGGAAGATGAAGTCACCACAGTGGCAGTTGACCTCAACAAGAGTACCACAAGCATTGATCATGACCTCGACACAATTGGCTTCAAACCATACAAGAGATGTTCTGTGGAAGCGAAGGAGAATAGGGTGCCGGCTAGCGACGAGGTTGGTACCAAGAGGATTCGTCTTGATAGTGAAGCATCAACATGA
- >Zm00001eb415760_T001 ATGAATAAGAAAAAGCAGGACCGCTCTTCATGCGGTTCTAACACACCTTCAAGTAGTGATGTAGATGTGGACAATGTCCCTGAGAAAGAGGGCAATGGTAATGAGAAGGCGAAGCAAGCCTCCTGCAGCAACTCTTCAGCTGGTGACACTAACCACCGCAGATTTAGAAGCAGTGGAAGCACGAGTGATTCATGGAAGGAAGTTTCCGAAGAGGGTCGTCTGGCTTTCCATGCGCTGTTCAGTAGAGAAAAGCTTCCGCAAAGCTTTTCTCCCCCACAAGCAGAAGGCTCGAAGGAAGTTGGCAAGGAGGAGGAAGATGAAGTCACCACAGTGGCAGTTGACCTCAACAAGAGTACCACAAGCATTGATCATGACCTCGACACAATTGGCTTCAAACCATACAAGAGATGTTCTGTGGAAGCGAAGGAGAATAGGGTGCCGGCTAGCGACGAGGTTGGTACCAAGAGGATTCGTCTTGATAGTGAAGCATCAACATGA
Protein Sequence
- >Zm00001eb415760_P002 MNKKKQDRSSCGSNTPSSSDVDVDNVPEKEGNGNEKAKQASCSNSSAGDTNHRRFRSSGSTSDSWKEVSEEGRLAFHALFSREKLPQSFSPPQAEGSKEVGKEEEDEVTTVAVDLNKSTTSIDHDLDTIGFKPYKRCSVEAKENRVPASDEVGTKRIRLDSEAST
- >Zm00001eb415760_P001 MNKKKQDRSSCGSNTPSSSDVDVDNVPEKEGNGNEKAKQASCSNSSAGDTNHRRFRSSGSTSDSWKEVSEEGRLAFHALFSREKLPQSFSPPQAEGSKEVGKEEEDEVTTVAVDLNKSTTSIDHDLDTIGFKPYKRCSVEAKENRVPASDEVGTKRIRLDSEAST