Gene Details:
- Gene ID: Zm00001eb031560
- Gene Symbol: ZmPIF4.1 bhlh163
- Gene Name: bHLH-transcription factor 163
- Genome: Zm-B73-REFERENCE-NAM-5.0
- Species: Zea mays
Functional Descriptions:
- ZmPIFs in regulating light signaling and photomorphogenesis in maize.
- Knockout of ZmPIFs by CRISPR/Cas9 Causes Short Mesocotyls in Maize under Darkness.
- ZmPIFs Act as Positive Regulators in Response to Shade.
Function-related keywords:
Literature:
- Characterization of Maize Phytochrome-Interacting Factors in Light Signaling and Photomorphogenesis. DOI: 10.1104/pp.19.00239 ; PMID: 31350363
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >Zm00001eb031560_T003 CTTGCCCTGCTGCAACTTGAACCTCCTGGCAGCTCCTGTTTCAGGCAGGCAGCAAGTAGGGAAGAGGCTCTGCAGATCAGTTCCATGCAGACAGGTTCTTGTTTCTTCTTCTACCTATGACTTCCGTCCTCTGCCCATCTCGGTTTAGCGATCGAGCACGCCTGCTCGGTGGTGGAATGCGCTGCGACAGCCCGAGCCGCCATGGACATGAGCCACTACATCCCCGATTGGAGCAGCAGCATGGGAGACACCTTCGCGCCACTGGGGTCGGTTCCGGCTCCCATCCTGATCCGATCATTCCAACAAAGCTGCGCCACAGCCTCTCTTCCCGTCCATGGCTGATGCGGCGCGGGCGTGTACTGTGTACGTCGCGTCCTTTGTCTCTGTTGCTGTTTGCTTGCAGCGGCGAGGACGACGACGGGCTCATCGAGCTCATGTGGCGCAACGGCCACGTGGTCATGCAGGCCCAGGCGCCGCGGAAGCCGCCGAGACCCGACGACGACGAGGCGGCGGCGGCGCAGGCGCAGGCGTGGTTCCAGTACCCGGTGGAGGAGAGGGCCGACCTCTTCTCGGAGCTCTTCGGGGAGGCGCAGGCGGCCGTCGGCGGCGCGCGCGGGGAGGCCGCGCGCCAGAGTATCCGGATGATGCCGCCGCCGCCGCCGCCGCCGAGGCCCGCGCAAGCGCCGCGGGAGGAGAAGGCGTGCCCGGGAGACGGCGGCACGGCGACGGCGACGGACGGCGCCGGCTCGTCCGTGCTCACGGTCGTGTCCAGCCTCTGCGGGAGCAACGGCAACCACGTGCAGGCGACGGCGCCGGGGGACGTCGCCAGGGCCCGCGACGTGCTGATGGTGACCTCGTCGTCGACGACGCGTTCCAGGTCATGCACCACCAAGAGCGAGCAGCCGGGTCCCGGGCCCGGCGCTGCCCGCCGGAGCGGCAAGAGGAAGCATAACGACGCCACCGATGCCGAGGACGTGGGGCTGGAGTGCGAGCCGGCGCAGAGGACGACGACTGCCAAGCGGCGCCGCGCCGCGCAAGTCCACAACCTCTCGGAGCGGAGGAGACGGGACAGGATCAACGAGAAGATGAAGGCCCTGCAGGAACTCATACCCCACTGCAACAAAGCGGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAGTCGCTGCAGCTCCAGCTGCAGGTGGTGTGGATGGGCGGCGGCATCGCGGCGGCGGGGGTGCACCAGCGGACGATGGTGGCCGCGCCCGGGCGTCCTCCCCACGTGGCTTCCCTGCCGGCGTCGGCGCCCGACCTCTATACGCGCTACCTCGCCGTCGACCACCTGCCGCCACCGCCCTTGGTGCCACCGCCACGCACGGCGGCGGCGATGGGCTTGTACCCGCGCCAGAACCCCGTGCCGGCGACGTCGTCTCCTTCCTTCCGAACGACCGAAAATACGCGAAAACTATGGCAAGCCTGAGATTCAGATCCGGGGTATGGTGACCAGCTGATGGGTCATCTAGCTGCATGCATGTGTGTATGTGTTGGTAGTATGGTTAAGCCTTGACAGAGACTTGTGATCGAGACCGAGATCGACCGATAGGCCGTCACTTCTTTTTTCTTCCATCTTTCAGTTTTTGGTTGATAGGC
- >Zm00001eb031560_T001 CTTGCCCTGCTGCAACTTGAACCTCCTGGCAGCTCCTGTTTCAGGCAGGCAGCAAGTAGGGAAGAGGCTCTGCAGATCAGTTCCATGCAGACAGGTTCTTGTTTCTTCTTCTACCTATGACTTCCGTCCTCTGCCCATCTCGGTTTAGCGATCGAGCACGCCTGCTCGGTGGTGGAATGCGCTGCGACAGCCCGAGCCGCCATGGACATGAGCCACTACATCCCCGATTGGAGCAGCAGCATGGGAGACACCTTCGCGCCACTGGGGTCGGTTCCGGCTCCCATCCTGATCCGATCATTCCAACAAAGCTGCGCCACAGCCTCTCTTCCCGTCCATGGCTGATGCGGCGCGGGCGTGTACTGTGTACGTCGCGTCCTTTGTCTCTGTTGCTGTTTGCTTGCAGCGGCGAGGACGACGACGGGCTCATCGAGCTCATGTGGCGCAACGGCCACGTGGTCATGCAGGCCCAGGCGCCGCGGAAGCCGCCGAGACCCGACGACGACGAGGCGGCGGCGGCGCAGGCGCAGGCGTGGTTCCAGTACCCGGTGGAGGAGAGGGCCGACCTCTTCTCGGAGCTCTTCGGGGAGGCGCAGGCGGCCGTCGGCGGCGCGCGCGGGGAGGCCGCGCGCCAGAGTATCCGGATGATGCCGCCGCCGCCGCCGCCGCCGAGGCCCGCGCAAGCGCCGCGGGAGGAGAAGGCGTGCCCGGGAGACGGCGGCACGGCGACGGCGACGGACGGCGCCGGCTCGTCCGTGCTCACGGTCGTGTCCAGCCTCTGCGGGAGCAACGGCAACCACGTGCAGGCGACGGCGCCGGGGGACGTCGCCAGGGCCCGCGACGTGCTGATGGTGACCTCGTCGTCGACGACGCGTTCCAGGTCATGCACCACCAAGAGCGAGCAGCCGGGTCCCGGGCCCGGCGCTGCCCGCCGGAGCGGCAAGAGGAAGCATAACGACGCCACCGATGCCGAGGACGTGGGGCTGGAGTGCGAGCCGGCGCAGAGGACGACGACTGCCAAGCGGCGCCGCGCCGCGCAAGTCCACAACCTCTCGGAGCGGAGGAGACGGGACAGGATCAACGAGAAGATGAAGGCCCTGCAGGAACTCATACCCCACTGCAACAAAGCGGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAGTCGCTGCAGCTCCAGCTGCAGGTGGTGTGGATGGGCGGCGGCATCGCGGCGGCGGGGGTGCACCAGCGGACGATGGTGGCCGCGCCCGGGCGTCCTCCCCACGTGGCTTCCCTGCCGGCGTCGGCGCCCGACCTCTATACGCGCTACCTCGCCGTCGACCACCTGCCGCCACCGCCCTTGGTGCCACCGCCACGCACGGCGGCGGCGATGGGCTTGTACCCGCGCCAGAACCCCGTGCCGGCGACGTCGTCTCCTTCCTTCCGAACGACCGAAAATACGCGAAAACTATGGCAAGCCTGAGATTCAGATCCGGGGTATGGTGACCAGCTGATGGGTCATCTAGCTGCATGCATGTGTGTATGTGTTGGTAGTATGGTTAAGCCTTGACAGAGACTTGTGATCGAGACCGAGATCGACCGATAGGCCGTCACTTCTTTTTTCTTCCATCTTTCAGTTTTTGGTTGATAGGC
- >Zm00001eb031560_T002 CTTGCCCTGCTGCAACTTGAACCTCCTGGCAGCTCCTGTTTCAGGCAGGCAGCAAGTAGGGAAGAGGCTCTGCAGATCAGTTCCATGCAGACAGGTTCTTGTTTCTTCTTCTACCTATGACTTCCGTCCTCTGCCCATCTCGGTTTAGCGATCGAGCACGCCTGCTCGGTGGTGGAATGCGCTGCGACAGCCCGAGCCGCCATGGACATGAGCCACTACATCCCCGATTGGAGCAGCAGCATGGGAGACACCTTCGCGCCACTGGGGTCGGTTCCGGCTCCCATCCTGATCCGATCATTCCAACAAAGCTGCGCCACAGCCTCTCTTCCCGTCCATGGCTGATGCGGCGCGGGCGTGTACTGTGTACGTCGCGTCCTTTGTCTCTGTTGCTGTTTGCTTGCAGCGGCGAGGACGACGACGGGCTCATCGAGCTCATGTGGCGCAACGGCCACGTGGTCATGCAGGCCCAGGCGCCGCGGAAGCCGCCGAGACCCGACGACGACGAGGCGGCGGCGGCGCAGGCGCAGGCGTGGTTCCAGTACCCGGTGGAGGAGAGGGCCGACCTCTTCTCGGAGCTCTTCGGGGAGGCGCAGGCGGCCGTCGGCGGCGCGCGCGGGGAGGCCGCGCGCCAGAGTATCCGGATGATGCCGCCGCCGCCGCCGCCGCCGAGGCCCGCGCAAGCGCCGCGGGAGGAGAAGGCGTGCCCGGGAGACGGCGGCACGGCGACGGCGACGGACGGCGCCGGCTCGTCCGTGCTCACGGTCGTGTCCAGCCTCTGCGGGAGCAACGGCAACCACGTGCAGGCGACGGCGCCGGGGGACGTCGCCAGGGCCCGCGACGTGCTGATGGTGACCTCGTCGTCGACGACGCGTTCCAGGTCATGCACCACCAAGAGCGAGCAGCCGGGTCCCGGGCCCGGCGCTGCCCGCCGGAGCGGCAAGAGGAAGCATAACGACGCCACCGATGCCGAGGACGTGGGGCTGGAGTGCGAGCCGGCGCAGAGGACGACGACTGCCAAGCGGCGCCGCGCCGCGCAAGTCCACAACCTCTCGGAGCGGAGGAGACGGGACAGGATCAACGAGAAGATGAAGGCCCTGCAGGAACTCATACCCCACTGCAACAAAGCGGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAGTCGCTGCAGCTCCAGCTGCAGGTGGTGTGGATGGGCGGCGGCATCGCGGCGGCGGGGGTGCACCAGCGGACGATGGTGGCCGCGCCCGGGCGTCCTCCCCACGTGGCTTCCCTGCCGGCGTCGGCGCCCGACCTCTATACGCGCTACCTCGCCGTCGACCACCTGCCGCCACCGCCCTTGGTGCCACCGCCACGCACGGCGGCGGCGATGGGCTTGTACCCGCGCCAGAACCCCGTGCCGGCGACGTCGTCTCCTTCCTTCCGAACGACCGAAAATACGCGAAAACTATGGCAAGCCTGAGATTCAGATCCGGGGTATGGTGACCAGCTGATGGGTCATCTAGCTGCATGCATGTGTGTATGTGTTGGTAGTATGGTTAAGCCTTGACAGAGACTTGTGATCGAGACCGAGATCGACCGATAGGCCGTCACTTCTTTTTTCTTCCATCTTTCAGTTTTTGGTTGATAGGC
CDS Sequence
- >Zm00001eb031560_T003 ATGACTTCCGTCCTCTGCCCATCTCGGTTTAGCGATCGAGCACGCCTGCTCGGTGGTGGAATGCGCTGCGACAGCCCGAGCCGCCATGGACATGAGCCACTACATCCCCGATTGGAGCAGCAGCATGGGAGACACCTTCGCGCCACTGGGGTCGGTTCCGGCTCCCATCCTGATCCGATCATTCCAACAAAGCTGCGCCACAGCCTCTCTTCCCGTCCATGGCTGATGCGGCGCGGGCGTGTACTGTGTACGTCGCGTCCTTTGTCTCTGTTGCTGTTTGCTTGCAGCGGCGAGGACGACGACGGGCTCATCGAGCTCATGTGGCGCAACGGCCACGTGGTCATGCAGGCCCAGGCGCCGCGGAAGCCGCCGAGACCCGACGACGACGAGGCGGCGGCGGCGCAGGCGCAGGCGTGGTTCCAGTACCCGGTGGAGGAGAGGGCCGACCTCTTCTCGGAGCTCTTCGGGGAGGCGCAGGCGGCCGTCGGCGGCGCGCGCGGGGAGGCCGCGCGCCAGAGTATCCGGATGATGCCGCCGCCGCCGCCGCCGCCGAGGCCCGCGCAAGCGCCGCGGGAGGAGAAGGCGTGCCCGGGAGACGGCGGCACGGCGACGGCGACGGACGGCGCCGGCTCGTCCGTGCTCACGGTCGTGTCCAGCCTCTGCGGGAGCAACGGCAACCACGTGCAGGCGACGGCGCCGGGGGACGTCGCCAGGGCCCGCGACGTGCTGATGGTGACCTCGTCGTCGACGACGCGTTCCAGGTCATGCACCACCAAGAGCGAGCAGCCGGGTCCCGGGCCCGGCGCTGCCCGCCGGAGCGGCAAGAGGAAGCATAACGACGCCACCGATGCCGAGGACGTGGGGCTGGAGTGCGAGCCGGCGCAGAGGACGACGACTGCCAAGCGGCGCCGCGCCGCGCAAGTCCACAACCTCTCGGAGCGGAGGAGACGGGACAGGATCAACGAGAAGATGAAGGCCCTGCAGGAACTCATACCCCACTGCAACAAAGCGGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAGTCGCTGCAGCTCCAGCTGCAGGTGGTGTGGATGGGCGGCGGCATCGCGGCGGCGGGGGTGCACCAGCGGACGATGGTGGCCGCGCCCGGGCGTCCTCCCCACGTGGCTTCCCTGCCGGCGTCGGCGCCCGACCTCTATACGCGCTACCTCGCCGTCGACCACCTGCCGCCACCGCCCTTGGTGCCACCGCCACGCACGGCGGCGGCGATGGGCTTGTACCCGCGCCAGAACCCCGTGCCGGCGACGTCGTCTCCTTCCTTCCGAACGACCGAAAATACGCGAAAACTATGGCAAGCCTGA
- >Zm00001eb031560_T001 ATGACTTCCGTCCTCTGCCCATCTCGGTTTAGCGATCGAGCACGCCTGCTCGGTGGTGGAATGCGCTGCGACAGCCCGAGCCGCCATGGACATGAGCCACTACATCCCCGATTGGAGCAGCAGCATGGGAGACACCTTCGCGCCACTGGGGTCGGTTCCGGCTCCCATCCTGATCCGATCATTCCAACAAAGCTGCGCCACAGCCTCTCTTCCCGTCCATGGCTGATGCGGCGCGGGCGTGTACTGTGTACGTCGCGTCCTTTGTCTCTGTTGCTGTTTGCTTGCAGCGGCGAGGACGACGACGGGCTCATCGAGCTCATGTGGCGCAACGGCCACGTGGTCATGCAGGCCCAGGCGCCGCGGAAGCCGCCGAGACCCGACGACGACGAGGCGGCGGCGGCGCAGGCGCAGGCGTGGTTCCAGTACCCGGTGGAGGAGAGGGCCGACCTCTTCTCGGAGCTCTTCGGGGAGGCGCAGGCGGCCGTCGGCGGCGCGCGCGGGGAGGCCGCGCGCCAGAGTATCCGGATGATGCCGCCGCCGCCGCCGCCGCCGAGGCCCGCGCAAGCGCCGCGGGAGGAGAAGGCGTGCCCGGGAGACGGCGGCACGGCGACGGCGACGGACGGCGCCGGCTCGTCCGTGCTCACGGTCGTGTCCAGCCTCTGCGGGAGCAACGGCAACCACGTGCAGGCGACGGCGCCGGGGGACGTCGCCAGGGCCCGCGACGTGCTGATGGTGACCTCGTCGTCGACGACGCGTTCCAGGTCATGCACCACCAAGAGCGAGCAGCCGGGTCCCGGGCCCGGCGCTGCCCGCCGGAGCGGCAAGAGGAAGCATAACGACGCCACCGATGCCGAGGACGTGGGGCTGGAGTGCGAGCCGGCGCAGAGGACGACGACTGCCAAGCGGCGCCGCGCCGCGCAAGTCCACAACCTCTCGGAGCGGAGGAGACGGGACAGGATCAACGAGAAGATGAAGGCCCTGCAGGAACTCATACCCCACTGCAACAAAGCGGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAGTCGCTGCAGCTCCAGCTGCAGGTGGTGTGGATGGGCGGCGGCATCGCGGCGGCGGGGGTGCACCAGCGGACGATGGTGGCCGCGCCCGGGCGTCCTCCCCACGTGGCTTCCCTGCCGGCGTCGGCGCCCGACCTCTATACGCGCTACCTCGCCGTCGACCACCTGCCGCCACCGCCCTTGGTGCCACCGCCACGCACGGCGGCGGCGATGGGCTTGTACCCGCGCCAGAACCCCGTGCCGGCGACGTCGTCTCCTTCCTTCCGAACGACCGAAAATACGCGAAAACTATGGCAAGCCTGA
- >Zm00001eb031560_T002 ATGACTTCCGTCCTCTGCCCATCTCGGTTTAGCGATCGAGCACGCCTGCTCGGTGGTGGAATGCGCTGCGACAGCCCGAGCCGCCATGGACATGAGCCACTACATCCCCGATTGGAGCAGCAGCATGGGAGACACCTTCGCGCCACTGGGGTCGGTTCCGGCTCCCATCCTGATCCGATCATTCCAACAAAGCTGCGCCACAGCCTCTCTTCCCGTCCATGGCTGATGCGGCGCGGGCGTGTACTGTGTACGTCGCGTCCTTTGTCTCTGTTGCTGTTTGCTTGCAGCGGCGAGGACGACGACGGGCTCATCGAGCTCATGTGGCGCAACGGCCACGTGGTCATGCAGGCCCAGGCGCCGCGGAAGCCGCCGAGACCCGACGACGACGAGGCGGCGGCGGCGCAGGCGCAGGCGTGGTTCCAGTACCCGGTGGAGGAGAGGGCCGACCTCTTCTCGGAGCTCTTCGGGGAGGCGCAGGCGGCCGTCGGCGGCGCGCGCGGGGAGGCCGCGCGCCAGAGTATCCGGATGATGCCGCCGCCGCCGCCGCCGCCGAGGCCCGCGCAAGCGCCGCGGGAGGAGAAGGCGTGCCCGGGAGACGGCGGCACGGCGACGGCGACGGACGGCGCCGGCTCGTCCGTGCTCACGGTCGTGTCCAGCCTCTGCGGGAGCAACGGCAACCACGTGCAGGCGACGGCGCCGGGGGACGTCGCCAGGGCCCGCGACGTGCTGATGGTGACCTCGTCGTCGACGACGCGTTCCAGGTCATGCACCACCAAGAGCGAGCAGCCGGGTCCCGGGCCCGGCGCTGCCCGCCGGAGCGGCAAGAGGAAGCATAACGACGCCACCGATGCCGAGGACGTGGGGCTGGAGTGCGAGCCGGCGCAGAGGACGACGACTGCCAAGCGGCGCCGCGCCGCGCAAGTCCACAACCTCTCGGAGCGGAGGAGACGGGACAGGATCAACGAGAAGATGAAGGCCCTGCAGGAACTCATACCCCACTGCAACAAAGCGGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAGTCGCTGCAGCTCCAGCTGCAGGTGGTGTGGATGGGCGGCGGCATCGCGGCGGCGGGGGTGCACCAGCGGACGATGGTGGCCGCGCCCGGGCGTCCTCCCCACGTGGCTTCCCTGCCGGCGTCGGCGCCCGACCTCTATACGCGCTACCTCGCCGTCGACCACCTGCCGCCACCGCCCTTGGTGCCACCGCCACGCACGGCGGCGGCGATGGGCTTGTACCCGCGCCAGAACCCCGTGCCGGCGACGTCGTCTCCTTCCTTCCGAACGACCGAAAATACGCGAAAACTATGGCAAGCCTGA
Protein Sequence
- >Zm00001eb031560_P003 MTSVLCPSRFSDRARLLGGGMRCDSPSRHGHEPLHPRLEQQHGRHLRATGVGSGSHPDPIIPTKLRHSLSSRPWLMRRGRVLCTSRPLSLLLFACSGEDDDGLIELMWRNGHVVMQAQAPRKPPRPDDDEAAAAQAQAWFQYPVEERADLFSELFGEAQAAVGGARGEAARQSIRMMPPPPPPPRPAQAPREEKACPGDGGTATATDGAGSSVLTVVSSLCGSNGNHVQATAPGDVARARDVLMVTSSSTTRSRSCTTKSEQPGPGPGAARRSGKRKHNDATDAEDVGLECEPAQRTTTAKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKADKASMLDEAIEYLKSLQLQLQVVWMGGGIAAAGVHQRTMVAAPGRPPHVASLPASAPDLYTRYLAVDHLPPPPLVPPPRTAAAMGLYPRQNPVPATSSPSFRTTENTRKLWQA
- >Zm00001eb031560_P001 MTSVLCPSRFSDRARLLGGGMRCDSPSRHGHEPLHPRLEQQHGRHLRATGVGSGSHPDPIIPTKLRHSLSSRPWLMRRGRVLCTSRPLSLLLFACSGEDDDGLIELMWRNGHVVMQAQAPRKPPRPDDDEAAAAQAQAWFQYPVEERADLFSELFGEAQAAVGGARGEAARQSIRMMPPPPPPPRPAQAPREEKACPGDGGTATATDGAGSSVLTVVSSLCGSNGNHVQATAPGDVARARDVLMVTSSSTTRSRSCTTKSEQPGPGPGAARRSGKRKHNDATDAEDVGLECEPAQRTTTAKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKADKASMLDEAIEYLKSLQLQLQVVWMGGGIAAAGVHQRTMVAAPGRPPHVASLPASAPDLYTRYLAVDHLPPPPLVPPPRTAAAMGLYPRQNPVPATSSPSFRTTENTRKLWQA
- >Zm00001eb031560_P002 MTSVLCPSRFSDRARLLGGGMRCDSPSRHGHEPLHPRLEQQHGRHLRATGVGSGSHPDPIIPTKLRHSLSSRPWLMRRGRVLCTSRPLSLLLFACSGEDDDGLIELMWRNGHVVMQAQAPRKPPRPDDDEAAAAQAQAWFQYPVEERADLFSELFGEAQAAVGGARGEAARQSIRMMPPPPPPPRPAQAPREEKACPGDGGTATATDGAGSSVLTVVSSLCGSNGNHVQATAPGDVARARDVLMVTSSSTTRSRSCTTKSEQPGPGPGAARRSGKRKHNDATDAEDVGLECEPAQRTTTAKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKADKASMLDEAIEYLKSLQLQLQVVWMGGGIAAAGVHQRTMVAAPGRPPHVASLPASAPDLYTRYLAVDHLPPPPLVPPPRTAAAMGLYPRQNPVPATSSPSFRTTENTRKLWQA