Gene Details:
- Gene ID: Zm00001d001964
- Gene Symbol: ZmSAUR15
- Gene Name: small auxin up RNA15
- Genome: Zm-B73-REFERENCE-GRAMENE-4.0
- Species: Zea mays
Functional Descriptions:
- Polymorphisms in the ZmSAUR15 promoter that influence the expression of ZmSAUR15 transcripts modulate the EC induction capacity in maize.
- ZmSAUR15, which encodes a small auxin-upregulated RNA, acts as a negative effector in maize EC induction.
- ZmSAUR15 may repress cell expansion and cell division, which consequently disturbs the meristematic status of the callus and inhibits EC formation.
- ZmSAUR15 is involved in indole-3-acetic acid biosynthesis and cell division in immature embryo-derived callus.
- Genetic variants in ZmSAUR15 promoter are linked to the ECIR and IAA content in maize.
- The ability of immature embryos to induce EC formation can be improved by the knockout of ZmSAUR15, which consequently increases the callus regeneration efficiency.
Function-related keywords:
- auxin , cell-division , iaa , auxin-biosynthesis , embryo , callus , cell-expansion , iaa-biosynthesis , callus-formation
Literature:
- Genetic variations in ZmSAUR15 contribute to the formation of immature embryo-derived embryonic calluses in maize. DOI: 10.1111/tpj.15609 ; PMID: 34822726
Related News:
Gene Resources:
- NCBI ID: 103645805
- UniProt accessions: A0A1D6DUW7
Sequences:
cDNA Sequence
- >Zm00001eb228160_T001 CCAACAACAGCACAGAAAACCCCACAGGTCATAGACAGCGGAGCTCCCTCCAGTCTCCATCCAATAACACGAGCTAACCACCGCCCAACCGAAACCGGGCCCCACCGGTCTCCCCGTCGCCACGTACGCGGCCGGAGCGCCCTATACAAGCGCCACGTCGATCGCCGACTCGCCGTCGCCGCGTCCCCCACGGCTCTTCCTTCATCCTCCGGCGAGCTATAAATCCCTCCCGCCGACGCCACCCCCATGGCATCCCGCGGTTCCCCTTCCTCCTACTCCTCCCCGAGGACCCCGACGTCGTCGAAGGCTAACCCTTGGCCCGCGCCCTCCGCCCCGCCGCTGTACCCGACGCTCTCCATGGCCGACCTCGCGCCCGTCGAGATAGGGCCCGCCTCGTCGCCGACGGCCTCGGATGACTACAACGCGCCTCCGCCGTCTGAGGACGTCCTCCTCCGGGTCCCCGGCGCGCGGCTCCACCTCGTCGACCGCAGCCGCAGCCACCCGCTGGCCGCCGGCGACCTCTCCCTCCTCCGCATCCGCTCCGGCGACACCTCCCTGGCCGCCATCGCGCTGCTGGGCCCGGTCCAGTGGCCGCTCGCGCGCGACGTGGCCGCCGTCAAGCTGGATCCCTGCCACTACGCCTTCTCCCTCACCGTGCCGGCCTCCGCCGACGACCCCAGCCCCGACCCGCTCCACTACGGCCTCACGCTCTCCCGCCCCGATGTGCGCCTCGACGGCGTCCTCGCTGCCTACACCAGCTTCTCCGTGCACGCCGTGGTCGGCGCCGGGCAGCTGGAGGCCAGGGTGCGCGACGAGGCCGAGGCCGCCGCGTACTGGACGGCCGTCGCGCCCAACGTGGAGGCGTACGGAGGCGCGGTGGCCAGGACCATCGCCACGGGCGCCGAGCACCTCGCCAAGGGGATACTGTGGTGCGGGGAGGTCACGGTGGAGAGGCTCCGTTGGGGCAATGAGGTCCTCAAGAGGAGGATGCAGCCTGGCGACGCCAACGCCGAGGTCAGCCCCGAGATGCTCAGGCGAATCAAAAGGGCTAAGAGGGTGAGCCAAATATCTGAGAAAGTGGCGACTGGGATTTTGTCCGGAGTGGTGAAGGTCACTGGTTACTTCACAAGCTCTCTGGCCAACTCGAAAGCTGGCAAGAAGTTCTTCAACATGTTGCCTGGAGAGATCGTTCTTGCTTCGCTTGACGGATTTGGGAAGATCTGCGACGCCGTGGAGGTGGCCGGAAAGAACGTTTTGTCCACGTCGTCAACTGTGACGACCGGGCTAGTATCTCACAGGTACGGAGACAAAGCCGCCGCCGCAACGAACGAAGGGCTGGACGCCGCCGGGCACGCCATCGGGACGGCATGGGCCGTGTTCAAGATCCGGCAGGCCTTGAACCCCAAGAGCGTCCTCAAACCCACGGCGCTGGCCACGTCCACCATCAGGGCCAACGTTGCCGAGCTTCGCGCGATGCACGGCAGCAGCAAGTAGCTCGCGCCTGCCGTCCCTGTTTCGTAAAAACTCTATTATCTCGCTCTGTCACGACCAACGATGCACTCGCTGCTTCCAGCAGCAGCGTTGGCTGTTGCCTGTTGGCCTGTAAATTCGTGTGGCTGAAACTGGGAAAGCCGGGAACTGAAAGGCTTACCGCTTCCGCTTTGTTAGTGATGCTGGTGATGTTCTAAGAGCTTTTACCACTGCTGTGCTGCTGCGTTGGCTTG
CDS Sequence
- >Zm00001eb228160_T001 ATGGCATCCCGCGGTTCCCCTTCCTCCTACTCCTCCCCGAGGACCCCGACGTCGTCGAAGGCTAACCCTTGGCCCGCGCCCTCCGCCCCGCCGCTGTACCCGACGCTCTCCATGGCCGACCTCGCGCCCGTCGAGATAGGGCCCGCCTCGTCGCCGACGGCCTCGGATGACTACAACGCGCCTCCGCCGTCTGAGGACGTCCTCCTCCGGGTCCCCGGCGCGCGGCTCCACCTCGTCGACCGCAGCCGCAGCCACCCGCTGGCCGCCGGCGACCTCTCCCTCCTCCGCATCCGCTCCGGCGACACCTCCCTGGCCGCCATCGCGCTGCTGGGCCCGGTCCAGTGGCCGCTCGCGCGCGACGTGGCCGCCGTCAAGCTGGATCCCTGCCACTACGCCTTCTCCCTCACCGTGCCGGCCTCCGCCGACGACCCCAGCCCCGACCCGCTCCACTACGGCCTCACGCTCTCCCGCCCCGATGTGCGCCTCGACGGCGTCCTCGCTGCCTACACCAGCTTCTCCGTGCACGCCGTGGTCGGCGCCGGGCAGCTGGAGGCCAGGGTGCGCGACGAGGCCGAGGCCGCCGCGTACTGGACGGCCGTCGCGCCCAACGTGGAGGCGTACGGAGGCGCGGTGGCCAGGACCATCGCCACGGGCGCCGAGCACCTCGCCAAGGGGATACTGTGGTGCGGGGAGGTCACGGTGGAGAGGCTCCGTTGGGGCAATGAGGTCCTCAAGAGGAGGATGCAGCCTGGCGACGCCAACGCCGAGGTCAGCCCCGAGATGCTCAGGCGAATCAAAAGGGCTAAGAGGGTGAGCCAAATATCTGAGAAAGTGGCGACTGGGATTTTGTCCGGAGTGGTGAAGGTCACTGGTTACTTCACAAGCTCTCTGGCCAACTCGAAAGCTGGCAAGAAGTTCTTCAACATGTTGCCTGGAGAGATCGTTCTTGCTTCGCTTGACGGATTTGGGAAGATCTGCGACGCCGTGGAGGTGGCCGGAAAGAACGTTTTGTCCACGTCGTCAACTGTGACGACCGGGCTAGTATCTCACAGGTACGGAGACAAAGCCGCCGCCGCAACGAACGAAGGGCTGGACGCCGCCGGGCACGCCATCGGGACGGCATGGGCCGTGTTCAAGATCCGGCAGGCCTTGAACCCCAAGAGCGTCCTCAAACCCACGGCGCTGGCCACGTCCACCATCAGGGCCAACGTTGCCGAGCTTCGCGCGATGCACGGCAGCAGCAAGTAG
Protein Sequence
- >Zm00001eb228160_P001 MASRGSPSSYSSPRTPTSSKANPWPAPSAPPLYPTLSMADLAPVEIGPASSPTASDDYNAPPPSEDVLLRVPGARLHLVDRSRSHPLAAGDLSLLRIRSGDTSLAAIALLGPVQWPLARDVAAVKLDPCHYAFSLTVPASADDPSPDPLHYGLTLSRPDVRLDGVLAAYTSFSVHAVVGAGQLEARVRDEAEAAAYWTAVAPNVEAYGGAVARTIATGAEHLAKGILWCGEVTVERLRWGNEVLKRRMQPGDANAEVSPEMLRRIKRAKRVSQISEKVATGILSGVVKVTGYFTSSLANSKAGKKFFNMLPGEIVLASLDGFGKICDAVEVAGKNVLSTSSTVTTGLVSHRYGDKAAAATNEGLDAAGHAIGTAWAVFKIRQALNPKSVLKPTALATSTIRANVAELRAMHGSSK